scholarly journals Snorkeling Strategy: Tolerance to Flooding in Rice and Potential Application for Weed Management

Genes ◽  
2020 ◽  
Vol 11 (9) ◽  
pp. 975
Author(s):  
Tiago Edu Kaspary ◽  
Nilda Roma-Burgos ◽  
Aldo Merotto
Keyword(s):  
Weed Control ◽  
Weed Management ◽  
Potential Application ◽  
Genetic Manipulation ◽  
Weedy Rice ◽  
Flood Tolerance ◽  
Flooding Tolerance ◽  
Cultivated Rice ◽  
Tolerance Mechanisms ◽  
Crop Models

Flooding is an important strategy for weed control in paddy rice fields. However, terrestrial weeds had evolved mechanisms of tolerance to flooding, resulting in new ‘snorkeling’ ecotypes. The aim of this review is to discuss the mechanisms of flooding tolerance in cultivated and weedy rice at different plant stages and the putative utility of this trait for weed management. Knowledge about flooding tolerance is derived primarily from crop models, mainly rice. The rice model informs us about the possible flooding tolerance mechanisms in weedy rice, Echinochloa species, and other weeds. During germination, the gene related to carbohydrate mobilization and energy intake (RAmy3D), and genes involved in metabolism maintenance under anoxia (ADH, PDC, and OsB12D1) are the most important for flooding tolerance. Flooding tolerance during emergence involved responses promoted by ethylene and induction of RAmy3D, ADH, PDC, and OsB12D1. Plant species tolerant to complete submersion also employ escape strategies or the ability to become quiescent during the submergence period. In weedy rice, the expression of PDC1, SUS3, and SUB1 genes is not directly related to flooding tolerance, contrary to what was learned in cultivated rice. Mitigation of flooding tolerance in weeds could be achieved with biotechnological approaches and genetic manipulation of flood tolerance genes through RNAi and transposons, providing a potential new tool for weed management.

Weedy Rice Diversity in Southern Brazil

Weed Science ◽  
2021 ◽  
pp. 1-37
Author(s):  
Leonard Bonilla Piveta ◽  
José Alberto Noldin ◽  
Nilda Roma-Burgos ◽  
Vívian Ebeling Viana ◽  
Lariza Benedetti ◽  
...  
Keyword(s):  
Oryza Sativa ◽  
Flowering Time ◽  
Weed Management ◽  
Phenotypic Diversity ◽  
Weedy Rice ◽  
Phenotypic Traits ◽  
Southern Brazil ◽  
Variable Response ◽  
Cultivated Rice ◽  
Flowering Synchrony

Abstract Weedy rice (Oryza sativa L.) is one of the most troublesome weeds affecting rice (Oryza sativa L.) production in many countries. Weedy rice control is difficult in rice fields because the weed and crop are phenotypically and morphologically similar. Weedy rice can be a source of genetic diversity to cultivated rice. Thus, this study aimed to characterize the morphological diversity of weedy rice in Southern Brazil. Qualitative and quantitative traits of 249 accessions from eight rice growing mesoregions in Rio Grande do Sul (RS) and Santa Catarina (SC) states were analyzed. For each accession, 24 morphological descriptors (14 qualitative and 10 quantitative) were evaluated. All the 249 accessions from RS and SC are of indica lineage. Considering all the phenotypic traits evaluated, the accessions separated into 14 distinct groups. One of the largest groups consisted of plants that were predominantly tall and with green leaves, intermediate shattering, and variable in flowering time. Distinct subgroups exist within larger clusters, showing discernable phenotypic diversity within the main clusters. The variability in flowering time was high (77 to 110 d after emergence), indicating high potential for flowering synchrony with rice cultivars and, consequently, gene flow. This indicates the need to remove escapes when planting herbicide-resistant rice. Thus, weedy rice populations in Southern Brazil are highly diverse and this diversity could result in variable response to weed management.

Dormancy-linked Population Structure of Weedy Rice (Oryza sp.)

Weed Science ◽  
2018 ◽  
Vol 66 (3) ◽  
pp. 331-339 ◽  
Author(s):  
Te-Ming Tseng ◽  
Vinod K. Shivrain ◽  
Amy Lawton-Rauh ◽  
Nilda R. Burgos
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Seed Dormancy ◽  
Weed Management ◽  
Production Systems ◽  
Gene Diversity ◽  
Weedy Rice ◽  
Cultivated Rice ◽  
Simple Sequence

AbstractSeed dormancy allows weedy rice (Oryza sp.) to persist in rice production systems. Weedy and wild relatives of rice (Oryza sativa L.) exhibit different levels of dormancy, which allows them to escape weed management tactics, increasing the potential for flowering synchronization, and therefore gene flow, between weedy Oryza sp. and cultivated rice. In this study, we determined the genetic diversity and divergence of representative dormant and nondormant weedy Oryza sp. groups from Arkansas. Twenty-five simple sequence repeat markers closely associated with seed dormancy were used. Four populations were included: dormant blackhull, dormant strawhull, nondormant blackhull, and nondormant strawhull. The overall gene diversity was 0.355, indicating considerable genetic variation among populations in these dormancy-related loci. Gene diversity among blackhull populations (0.398) was higher than among strawhull populations (0.245). Higher genetic diversity was also observed within and among dormant populations than in nondormant populations. Cluster analysis of 16 accessions, based on Nei’s genetic distance, showed four clusters. Clusters I, III, and IV consisted of only blackhull accessions, whereas Cluster II comprised only strawhull accessions. These four clusters did not separate cleanly into dormant and nondormant populations, indicating that not all markers were tightly linked to dormancy. The strawhull groups were most distant from blackhull weedy Oryza sp. groups. These data indicate complex genetic control of the dormancy trait, as dormant individuals exhibited higher genetic diversity than nondormant individuals. Seed-dormancy trait contributes to population structure of weedy Oryza sp., but this influence is less than that of hull color. Markers unique to the dormant populations are good candidates for follow-up studies on the control of seed dormancy in weedy Oryza sp.

The Future of Herbicides and Genetic Technology: Ramifications for Environmental Stewardship

Weed Science ◽  
2014 ◽  
Vol 62 (2) ◽  
pp. 382-384 ◽  
Author(s):  
Scott A. Senseman ◽  
Timothy L. Grey
Keyword(s):  
Weed Control ◽  
Weed Management ◽  
Genetic Manipulation ◽  
Environmental Stewardship ◽  
Agent Orange ◽  
Magic Bullet ◽  
Grand Challenge ◽  
Genetic Technology ◽  
Weed Species ◽  
The Future

Environmental stewardship refers to responsible use and protection of the natural environment through conservation and sustainable practices. Aldo Leopold (1887 to 1948) championed environmental stewardship based on a land ethic “dealing with man's relation to land and to the animals and plants that grow upon it.” Environmental stewardship as it relates to weed science has taken on varying roles as chemical weed control took hold in managing crops as a general practice soon after World War II, and became a well-known issue during the Vietnam War, with the extensive use of Agent Orange. As technologies in both chemistry and genetics have evolved, chemical weed control became safer with the advent of less toxicologically damaging materials. Combining toxicologically safe herbicides with genetic manipulation made it possible to apply chemicals that previously would have caused plant death, seemingly providing a magic bullet that simplified weed control for many producers during the mid to late 1990s. University scientists were guarded during the introduction of this technology; many understood that the magic bullet had flaws. By using predominately POST applications on weed species, genetic selection has given rise to substantial resistance, therefore presenting weed scientists with a grand challenge for the future. As new genetic technology is introduced for existing and future weed management problems, how will environmental stewardship be addressed and how can this technology be preserved? How can a producer afford it and how can they afford not to use it? When we have weeds present that used to be managed by herbicides and genetic technology, then society will be forced to deal with the same social, economic, agronomic, and environmental issues they dealt with prior to such technology. Herbicide-resistance technology and the concomitant herbicide-resistant weeds have provided a perfect case study to learn from if those in academia, extension, and industry will pay attention. Continuing education of the producer will be perhaps the biggest key in meeting the challenge to produce a safe and plentiful food supply for a growing population with minimal adverse effects of weeds while providing a desirable degree of environmental stewardship.

Surveys of Weed Management on Flooded Rice Yields in Southern Brazil

Weed Science ◽  
2021 ◽  
pp. 1-26
Author(s):  
Anelise L. Silva ◽  
Nereu A. Streck ◽  
Alencar J. Zanon ◽  
Giovana G. Ribas ◽  
Bruno L. Fruet ◽  
...  
Keyword(s):  
Oryza Sativa ◽  
Weed Control ◽  
Weed Management ◽  
Management Practices ◽  
Limiting Factors ◽  
Weedy Rice ◽  
Southern Brazil ◽  
Average Yield ◽  
Flooded Rice ◽  
Rice Yields

Abstract One of the main limiting factors for high yields of flooded rice (Oryza sativa L.) is the presence of weeds, especially herbicide-resistant weeds. The aim of this study was to evaluate the association of weed management practices adopted by flooded rice farmers in the State of Rio Grande do Sul (RS) to grain yield. For this purpose, 324 interview surveys were administered to farmers who supplied information about the history of weed management and yields. The answers to the survey indicated that weedy rice (Oryza sativa L.) and Echinochloa sp. were the most important weeds that occurred in flooded rice areas in RS. Advanced growth stage of weeds and inadequate environmental conditions such as air temperature and relative humidity were listed as the main reasons for the low weed control efficacy. Farmers achieved greater rice yields when adopted rice-soybean [Glycine max (L.) Merr.] (9,140 kg ha−1 average yield) and herbicide site of action rotations (8,801 kg ha−1 average yield) along with tank-mixes (8,580 kg ha−1 average yield) as specific management practices for resistant weed control. The use of glyphosate with residual herbicides in tank-mix in rice spiking stage is the main factor related to greater yields. The postemergence applications and their relations with delaying of flooded rice is a factor that reduces rice yield when no spiking glyphosate applications was made. Identification of the most important weeds in terms of occurrence, as well as the knowledge of the main agronomic practices adopted by the farmers, are essential so that recommendations for integrated management practices can be adopted in an increasingly accurate and sustainable-flooded rice areas in Southern Brazil.

Weed Management in Small Grains Harvested for Grain

EDIS ◽  
2020 ◽  
Vol 2020 (3) ◽  
Author(s):  
Jason Ferrell ◽  
Gregory MacDonald ◽  
Pratap Devkota
Keyword(s):  
Weed Control ◽  
Weed Management ◽  
Chemical Control ◽  
Management Practices ◽  
Good Management ◽  
Small Grains ◽  
Crop Competition

Successful weed control in small grains involves using good management practices in all phases of production. In Florida, winter weeds compete with small grains for moisture, nutrients, and light, with the greatest amount of competition occurring during the first six to eight weeks after planting. Weeds also cause harvest problems the following spring when the small grain is mature. This 4-page publication discusses crop competition, knowing your weeds, and chemical control. Written by J. A. Ferrell, G. E. MacDonald, and P. Devkota, and published by the UF/IFAS Agronomy Department, revised May 2020.

Weed Management in Peanuts

EDIS ◽  
2020 ◽  
Vol 2020 (3) ◽  
Author(s):  
Pratap Devkota
Keyword(s):  
Weed Control ◽  
Weed Management ◽  
Management Practices ◽  
Application Rate ◽  
Good Management ◽  
Peanut Production

Successful weed control in peanuts involves use of good management practices in all phases of peanut production. This 11-page document lists herbicide products registered for use in Florida peanut production, their mode of actions group, application rate per acre and per season, and reentry interval. It also discusses the performance of these herbicides on several weeds under Florida conditions. Written by J. A. Ferrell, G. E. MacDonald, and P. Devkota, and published by the UF/IFAS Agronomy Department, revised May 2020.

Bio-efficacy of post emergence herbicides in boro rice nursery as well as main field and their residual effects on non-target microorganisms

2020 ◽  
Vol 57 (3) ◽  
pp. 199-210
Author(s):  
Rajib Kundu ◽  
Mousumi Mondal ◽  
Sourav Garai ◽  
Ramyajit Mondal ◽  
Ratneswar Poddar
Keyword(s):  
Weed Control ◽  
Weed Management ◽  
Field Experiments ◽  
Block Design ◽  
Resistance Index ◽  
Residual Effects ◽  
Cost Ratio ◽  
Main Field ◽  
Weed Species ◽  
Similar Treatment

Field experiments were conducted at research farm of Bidhan Chandra Krishi Viswavidyalaya, Kalyani, West Bengal, India (22°97' N latitude and 88°44' E longitude, 9.75 m above mean sea level) under natural weed infestations in boro season rice (nursery bed as well as main field) during 2017-18 and 2018-19 to evaluate the herbicidal effects on weed floras, yield, non-target soil organisms to optimize the herbicide use for sustainable rice-production. Seven weed control treatments including three doses of bispyribac-sodium 10% SC (150,200, and 250 ml ha-1), two doses of fenoxaprop-p-ethyl 9.3% EC (500 and 625 ml ha-1), one weed free and weedy check were laid out in a randomized complete block design, replicated thrice. Among the tested herbicides, bispyribac-sodium with its highest dose (250 ml ha-1) resulted in maximum weed control efficiency, treatment efficiency index and crop resistance index irrespective of weed species and dates of observation in both nursery as well as main field. Similar treatment also revealed maximum grain yield (5.20 t ha-1), which was 38.38% higher than control, closely followed by Fenoxaprop-p-ethyl (625 ml ha-1) had high efficacy against grasses, sedge and broadleaf weed flora. Maximum net return (Rs. 48765 ha-1) and benefit cost ratio (1.72) were obtained from the treatment which received bispyribac-sodium @ 250 ml ha-1. Based on overall performance, the bispyribac-sodium (250 ml ha-1) may be considered as the best herbicide treatment for weed management in transplanted rice as well as nursery bed.

Postemergence Control of Italian Ryegrass in Hazelnut Orchards

2021 ◽  
pp. 1-22
Author(s):  
Marcelo L. Moretti
Keyword(s):  
Weed Control ◽  
Weed Management ◽  
Field Studies ◽  
Early Spring ◽  
Italian Ryegrass ◽  
Specific Response ◽  
Record Keeping ◽  
Effective Option ◽  
Contrast Analysis ◽  
Herbicide Use

Abstract Italian ryegrass has become a problematic weed in hazelnut orchards of Oregon because of the presence of herbicide-resistant populations. Resistant and multiple-resistant Italian ryegrass populations are now the predominant biotypes in Oregon; there is no information on which herbicides effectively control Italian ryegrass in hazelnut orchards. Six field studies were conducted in commercial orchards to evaluate Italian ryegrass control with POST herbicides. Treatments included flazasulfuron, glufosinate, glyphosate, paraquat, rimsulfuron, and sethoxydim applied alone or in selected mixtures during early spring when plants were in the vegetative stage. Treatment efficacy was dependent on the experimental site. The observed range of weed control 28 d after treatment was 13 to 76 % for glyphosate, 1 to 72% for paraquat, 58 to 88% for glufosinate, 16 to 97 % for flazasulfuron, 8 to 94% for rimsulfuron, and 25 to 91% for sethoxydim. Herbicides in mixtures improved control of Italian ryegrass compared to single active ingredients based on contrast analysis. Herbicides in mixture increased control by 27% compared to glyphosate, 18% to rimsulfuron, 15% to flazasulfuron, 19% to sethoxydim, and 12% compared to glufosinate when averaged across all sites, but mixture not always improved ground coverage of biomass reduction. This complex site-specific response highlights the importance of record-keeping for efficient herbicide use. Glufosinate is an effective option to manage Italian ryegrass. However, the glufosinate-resistant biotypes documented in Oregon may jeopardize this practice. Non-chemical weed control options are needed for sustainable weed management in hazelnuts.

scholarly journals Comparative transcriptomic and physiological analyses of weedy rice and cultivated rice to identify vital differentially expressed genes and pathways regulating the ABA response

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Hong Lang ◽  
Yuting He ◽  
Faliang Zeng ◽  
Fan Xu ◽  
Minghui Zhao ◽  
...  
Keyword(s):  
Differentially Expressed Genes ◽  
Differentially Expressed ◽  
Weedy Rice ◽  
Cultivated Rice ◽  
Biotic Stresses ◽  
Aba Sensitivity ◽  
Aba Catabolism ◽  
Physiological Analysis ◽  
Response To Stress ◽  
Aba Response

AbstractWeedy rice is a valuable germplasm resource characterized by its high tolerance to both abiotic and biotic stresses. Abscisic acid (ABA) serves as a regulatory signal in plant cells as part of their adaptive response to stress. However, a global understanding of the response of weedy rice to ABA remains to be elucidated. In the present study, the sensitivity to ABA of weedy rice (WR04-6) was compared with that of temperate japonica Shennong9816 (SN9816) in terms of seed germination and post-germination growth via the application of exogenous ABA and diniconazole, an inhibitor of ABA catabolism. Physiological analysis and a transcriptomic comparison allowed elucidation of the molecular and physiological mechanisms associated with continuous ABA and diniconazole treatment. WR04-6 was found to display higher ABA sensitivity than SN9816, resulting in the rapid promotion of antioxidant enzyme activity. Comparative transcriptomic analyses indicated that the number of differentially expressed genes (DEGs) in WR04-6 seedlings treated with 2 μM ABA or 10 μM diniconazole was greater than that in SN9816 seedlings. Genes involved in stress defense, hormone signal transduction, and glycolytic and citrate cycle pathways were highly expressed in WR04-6 in response to ABA and diniconazole. These findings provide new insight into key processes mediating the ABA response between weedy and cultivated rice.

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