Specific gut bacterial responses to natural diets of tropical birds

The composition of gut bacterial communities is strongly influenced by the host diet in many animal taxa. For birds, the effect of diet on the microbiomes has been documented through diet manipulation studies. However, for wild birds, most studies have drawn on literature-based information to decipher the dietary effects, thereby, overlooking individual variation in dietary intake. Here we examine how naturally consumed diets influence the composition of the crop and cloacal microbiomes of twenty-one tropical bird species, using visual and metabarcoding-based identification of consumed diets and bacterial 16S rRNA microbiome sequencing. We show that diet intakes vary markedly between individuals of the same species and that literature-based dietary guilds grossly underestimate intraspecific diet variability. Furthermore, despite an effect of literature-based dietary guild assignment of host taxa, the composition of natural diets does not align with crop and cloacal microbiome similarity. However, host-taxon specific gut bacterial lineages are positively correlated with specific diet items, indicating that certain microbes associate with different diet components in specific avian hosts. Consequently, microbiome composition is not congruent with the overall consumed diet composition of species, but specific components of a consumed diet lead to host-specific effects on gut bacterial taxa.

Changes in the feeding behavior and habitat use of the desert hedgehog Paraechinus aethiopicus (Ehrenberg 1832, Eulipotyphla: Erinaceidae), in Saudi Arabia

Due to the urbanization and human invasion of the natural environments, great changes have been occurred on the food composition and feeding ecology of several animals especially those are sharing human his habitat in fields, wadis and gardens. The desert hedgehogs Paraechinus aethiopicus populations inhabiting different localities in Saudi Arabia were studied by using stomach contents analysis between February 2015 and October 2019. Precise analysis of stomach contents of 55 hedgehogs showed that the food of P. aethiopicus is highly diverse and highly influenced with effect of human on the environment including cooked rice, insects, plant materials, eggshells, worms, garbage and remnants of mammals and birds. Diet composition showed seasonal variations that are apparently associated with changes in the availability of different food items. The present results clearly showed that P. aethiopicus is an omnivorous mammal, capable of adapting to a great variety of dietary compositions in the study sites.

Trophic ecology of Patagonian flounder Paralichthys patagonicus (Jordan, 1889) in the Argentine-Uruguayan Coastal Ecosystem

Food habits and diet composition of Patagonian flounder Paralichthys patagonicus (Jordan, 1889) were studied on the basis of stomach content analyses from 828 specimens (512 females, 304 males, 12 unsexed) collected during 16 commercial cruises between February 2009 and April 2010 in the Argentine-Uruguayan Coastal Ecosystem (34° S-41° S). A total of 272 stomachs (32.9%) contained food (184 females and 84 males), among which 20 prey taxa were identified. The most important prey category was pelagic fish, primarily Argentine anchovy (Engraulis anchoita), followed by rough scad (Trachurus lathami). Evidence showed that females consumed a higher total wet weight of prey compared to males. Results also suggested a specialised diet over E. anchoita, across all sex and size groups. The estimated trophic level for the population of P. patagonicus was 4.16. This study suggests that P. patagonicus is a tertiary piscivorous consumer of the trophic food web in the region, and reveals changes in the prey consumption compared with previous studies.

Short-Term Adaptation of Dairy Cattle Production Parameters to Individualized Changes in Dietary Top Dress

Immediate and short-term changes in diet composition can support individualized, real-time interventions in precision dairy production systems, and might increase feed efficiency (FE) of dairy cattle in the short-term. The objective of this study was to determine immediate and short-term effects of changes in diet composition on production parameters of dairy cattle fed varying amounts of top dressed commodities. A 4 × 4 replicated Latin square design was used to evaluate responses of twenty-four Holstein cows fed either no top dress (Control) or increasing amounts of: corn grain (CG), soybean meal (SBM), or chopped mixed grass hay (GH) top dressed on a total mixed ration (TMR) over four, 9-day periods. Throughout each period, top dressed commodities were incrementally increased, providing 0% to 20% of calculated net energy of lactation (NEL) intake. Measured production responses were analyzed for each 9-d period using a mixed-effects model considering two different time ranges. Samples collected from d 3 and 4 and from d 7 and 8 of each period were averaged and used to reflect “immediate” vs. “short-term” responses, respectively. In the immediate response time frame, control fed cows had lower milk yield, milk fat yield, and milk true protein yield than CG and SBM supplemented animals but similar responses to GH supplemented animals. Milk fat and protein percentages were not affected by top dress type in the immediate term. In the short-term response time-frame, GH supplemented animals had lower DMI and milk fat yield than all other groups. Control and GH supplemented cows had lower milk yield than CG and SBM fed cows. In the immediate response time frame, FE of SBM supplemented cows was superior to other groups. In the short-term time frame, FE of GH and SBM groups was improved over the control group. Results suggest that lactating dairy cows show rapid performance responses to small (<20% NEL) changes in dietary composition, which may be leveraged within automated precision feeding systems to optimize efficiency of production. Before this potential can be realized, further research is needed to examine integration of such strategies into automatic feeding systems and downstream impacts on individual animal FE and farm profitability.

Precision feeding gestating sows: effects on offspring growth performance and carcass and loin quality at slaughter

A total of 601 pigs from 65 litters were used to determine the effects of closely meeting estimated daily Lys and energy requirements for sows during gestation for three consecutive parities on offspring post-weaning growth performance and carcass and loin quality at slaughter. Sows were assigned a control (static diet composition; CON) or precision (individual daily blend of two diets to meet estimated Lys and energy requirements; PRE) feeding program between d 7 and 110 of gestation for three consecutive pregnancy cycles, starting with primiparous sows (parity 1: 12 CON and 12 PRE sows; parity 2: 8 CON and 13 PRE sows; parity 3: 8 CON and 12 PRE sows). At weaning (20±2 d of age), up to 10 pigs per litter were randomly selected and placed in a pen (1 litter per pen). All pens received ad libitum access to commercial diets in six phases (4-phase nursery, grower, and finisher, respectively). Four pigs per pen were slaughtered at ~125 kg BW for evaluation of carcass characteristics and loin quality. The ADG and ADFI of offspring were not influenced by maternal feeding program in any parity during nursery phases I through III. During nursery phase IV, ADG and ADFI were greater for litters from PRE- versus CON-fed sows (0.70 vs. 0.66 ± 0.03 kg/d and 1.15 vs. 1.08 ± 0.06 kg/d for ADG and ADFI, respectively; P &lt; 0.05). The BW for litters from PRE- versus CON-fed sows tended to be greater by d 66 of age (end of nursery period; 29.7 vs. 28.7 ± 1.1 kg; P = 0.076). Within the grower phase, litters from PRE-fed sows had a greater ADG in parity 2 but lower ADG in parity 3 versus litters from CON-fed sows (0.99 vs. 0.94 and 0.93 vs. 1.01 ± 0.03 kg/d for parities 2 and 3, respectively; P &lt; 0.05). No differences were observed for ADG or ADFI in the finisher phase or G:F in any phase for any parity. Loin eye area was smaller (52.2 vs. 55.0 ± 1.8 cm 2; P &lt; 0.05) for offspring from PRE- versus CON-fed sows. In parity 2, carcass lean yield tended to be less for offspring from PRE- versus CON-fed sows (58.6 vs. 59.6 ± 0.4%; P = 0.051). Minimal differences were observed for subjective and objective evaluations of loin quality. Closely meeting the estimated daily energy and Lys requirements for sows throughout gestation for three consecutive pregnancy cycles improved offspring growth performance (ADG and ADFI) in the final nursery stage, but generally did not affect growth performance in grower/finisher periods or carcass and loin quality at ~125 kg BW.

Environmental Accounting of the Yellow-Tail Lambari Aquaculture: Sustainability of Rural Freshwater Pond Systems

Freshwater pond aquaculture is the prevailing fish culture system worldwide, especially in developing countries. Climate change outcomes and inadequate environmental practices challenge its sustainability. This study applies emergy synthesis to assess the environmental performance of freshwater pond aquaculture in Brazil, aiming to identify and propose practices towards sustainability. As a study model, nine semi-intensive lambari farms operating at three levels of management were evaluated: low (LC), moderate (MC) and high (HC) control. Results showed that the main inputs for LC were services (27-46%), feed (7-39%), and water (15-21%), while for the MC and HC farms, they were feed (35-49% and 17-48%, respectively) and services (33-39% and 26-36%, respectively). All farms required more than 60% of their emergy from purchased inputs, resulting in low emergy sustainability index (ESI = 0.1-0.5). Replacing animal protein and oil on diet composition by vegetal sources, using superficial water instead of springwater, increasing juvenile productivity, and controlling pond fertilization can lead all systems to higher efficiency and resilience, increasing sustainability.

Diet composition of abundant fish species in the shallow waters of the Todos os Santos Bay, Bahia, Brazil

Coastal habitats have great ecological importance with estuarine environments providing feeding sites for many fish species, especially during juvenile life stages. This study investigates the diet composition and trophic guild organization of the common and abundant ichthyofauna in shallow areas of the Todos os Santos Bay (TSB), Bahia, Brazil, and their relationships with environmental parameters. Six fish sampling campaigns were carried out in the shallow zones (infralittoral) of the Paraguaçu River estuary which encompasses the inner and outer (marine exposure) reaches of the TSB. The stomach contents of 1231 individuals belonging to common and abundant species were examined. A total of 32 food items were identified and fish were into four trophic guilds: detritivores, zoobenthivores I, zoobenthivores II, and zooplanktivores. The relationship between the guilds and environmental parameters showed that zoobenthivores II and zooplanktivores guilds had a positive relationship with salinity and pH, explaining 86% of data variability, though only the salinity variable was significant. This study provides basic information about the diet composition of common and abundant species in the TSB and their organization into trophic guilds. In addition, demonstrates that shallow waters fish across all guilds have broadly similar diets, comprising food items that are usually associated with bottom waters.