matrix mechanics
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2022 ◽  
Vol 13 (1) ◽  
Author(s):  
Shilpa P. Pothapragada ◽  
Praver Gupta ◽  
Soumi Mukherjee ◽  
Tamal Das

AbstractIn epithelia, normal cells recognize and extrude out newly emerged transformed cells by competition. This process is the most fundamental epithelial defence against cancer, whose occasional failure promotes oncogenesis. However, little is known about what factors determine the success or failure of this defence. Here we report that mechanical stiffening of extracellular matrix attenuates the epithelial defence against HRasV12-transformed cells. Using photoconversion labelling, protein tracking, and loss-of-function mutations, we attribute this attenuation to stiffening-induced perinuclear sequestration of a cytoskeletal protein, filamin. On soft matrix mimicking healthy epithelium, filamin exists as a dynamically single population, which moves to the normal cell-transformed cell interface to initiate the extrusion of transformed cells. However, on stiff matrix mimicking fibrotic epithelium, filamin redistributes into two dynamically distinct populations, including a new perinuclear pool that cannot move to the cell-cell interface. A matrix stiffness-dependent differential between filamin-Cdc42 and filamin-perinuclear cytoskeleton interaction controls this distinctive filamin localization and hence, determines the success or failure of epithelial defence on soft versus stiff matrix. Together, our study reveals how pathological matrix stiffening leads to a failed epithelial defence at the initial stage of oncogenesis.


Author(s):  
Claudia Tanja Mierke

Biological materials such as extracellular matrix scaffolds, cancer cells, and tissues are often assumed to respond elastically for simplicity; the viscoelastic response is quite commonly ignored. Extracellular matrix mechanics including the viscoelasticity has turned out to be a key feature of cellular behavior and the entire shape and function of healthy and diseased tissues, such as cancer. The interference of cells with their local microenvironment and the interaction among different cell types relies both on the mechanical phenotype of each involved element. However, there is still not yet clearly understood how viscoelasticity alters the functional phenotype of the tumor extracellular matrix environment. Especially the biophysical technologies are still under ongoing improvement and further development. In addition, the effect of matrix mechanics in the progression of cancer is the subject of discussion. Hence, the topic of this review is especially attractive to collect the existing endeavors to characterize the viscoelastic features of tumor extracellular matrices and to briefly highlight the present frontiers in cancer progression and escape of cancers from therapy. Finally, this review article illustrates the importance of the tumor extracellular matrix mechano-phenotype, including the phenomenon viscoelasticity in identifying, characterizing, and treating specific cancer types.


Author(s):  
David Berenstein ◽  
Yueshu Guan

In this paper, we study real-time classical matrix mechanics of a simplified [Formula: see text] matrix model inspired by the black hole evaporation problem. This is a step towards making a quantitative model of real-time evaporation of a black hole, which is realized as a bound state of D0-branes in string theory. The model we study is the reduction of Yang–Mills in [Formula: see text] dimension to [Formula: see text] dimensions, which has been corrected with an additional potential that can be interpreted as a zero-point energy for fermions. Our goal is to understand the lifetime of such a classical bound state object in the classical regime. To do so, we pay particular attention to when [Formula: see text]-particles separate to check that the “off-diagonal modes” of the matrices become adiabatic and use that information to improve on existing models of evaporation. It turns out that the naive expectation value of the lifetime with the fermionic correction is infinite. This is a logarithmic divergence that arises from very large excursions in the separation between the branes near the threshold for classical evaporation. The adiabatic behavior lets us get some analytic control of the dynamics in this regime to get this estimate. This divergence is cutoff in the quantum theory due to quantization of the adiabatic parameter, resulting in a long lifetime of the bound state, with a parametric dependence of order [Formula: see text].


2021 ◽  
pp. 100093
Author(s):  
B.E. Sherlock ◽  
J. Chen ◽  
J.C. Mansfield ◽  
E. Green ◽  
C.P. Winlove

Author(s):  
Yi-Fang Chang

First, some mathematical and physical developments of biology and medicine are discussed, including biofield and biological electromagnetics. Second, we research nonlinear biology and biotopology, in which some knots may describe the protein folding. Third, symbolic dynamics of biology and the extensive quantum biology are researched. Fourth, we study the biothermodynamics and entropy. In thermodynamics of pharmacology, the main effects of various drugs are to promote internal interactions in body, and entropy decrease. Further, we introduce the diagnostic space, treatment space and some medicinal vectors, and propose the matrix mechanics of pharmacology. Finally, we research biology, medicine and pharmacology with time sequences. If we master the medication time, this will be able to get the minimum amount of medication, and the drugs can play the maximum treatment effect. If period is accurate, it can determine the time of play, negotiations, attack, etc. But, period of each individual should be change follow age, etc. This is a very valuable research.


2021 ◽  
Vol 15 (5) ◽  
pp. 054102
Author(s):  
Sandra Pérez-Rodríguez ◽  
Stephanie A. Huang ◽  
Carlos Borau ◽  
José Manuel García-Aznar ◽  
William J. Polacheck

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