Interchange and movements of humpback whales (Megaptera novaeangliae) between western North Pacific winter breeding grounds in northern Luzon, Philippines and Okinawa, Japan

Humpback whales wintering in the northern Philippines and Okinawa, Japan, belong to the western North Pacific subpopulation, now recognised as a distinct population segment. The numbers for this subpopulation are low hence it is being proposed to be listed as endangered. Although previous research revealed movements between breeding grounds, the relationship between these areas remain little understood. Recent survey efforts in the Philippines resulted in a total of 234 photo-identified individuals from 1999-2016 while Okinawa had 1,445 from 1991-2014. Within the seasons a total of 100 matches were found between the two breeding grounds including 38 males and 24 females while the rest were unknown. Within these matches, eight individuals were recorded moving within seasons, including two individuals moving across seasons multiple times. The two whales were both males, where one was recorded in both breeding grounds in three different seasons (2005, 2008 and 2012). The shortest duration of recorded sightings between grounds was one whale seen in the Philippines in late March 2012 and in Okinawa 13 days later. More females with calves were sighted in the Philippines than in Okinawa and this may indicate the Philippines as a preferred nursing ground.

Filling knowledge gaps for a threatened species: age and growth of Green Sturgeon of the southern Distinct Population Segment

The Green Sturgeon Acipenser medirostris is an anadromous, long-lived species that is distributed along the Pacific coast of North America. Green Sturgeon is vulnerable to global change due to its sensitive life history and few spawning locations. The persistence of Green Sturgeon is threatened by habitat modification, altered flows, and rising river temperatures. The southern Distinct Population Segment was listed as threatened under the U.S. Endangered Species Act in 2001 due to persistent stressors. Despite increased research efforts after the species was listed, substantial gaps in basic population information for Green Sturgeon remain. We present the only known information on age structure and growth of a threatened population of Green Sturgeon. By analyzing archived fin rays that were collected from 1984–2016, we revealed highly variable growth among individuals. We detected several age classes from 0–26 years and found similar growth rates of Sacramento River Green Sturgeon compared to northern populations. Though limited, this analysis is an important first step to understanding Green Sturgeon population dynamics and highlights critical research needs.

Wolf Delisting Challenges Demonstrate Need for an Improved Framework for Conserving Intraspecific Variation under the Endangered Species Act.

Recent advances in genomics have increased our understanding of geographic patterns of intraspecific variation and the importance of this variation in enhancing species’ potential to adapt to novel threats. However, as part of an effort to limit the scope of the Endangered Species Act (ESA), the US government has proposed the removal of the gray wolf from the list of protected species on the basis of a claim that the statute permits a species to be declared recovered given the existence of a single presently secure population. We rebut this interpretation and propose a framework for the conservation of adaptive potential that builds on current agency practice in delineating subspecific recovery units and reconciles the definition of significance in the statute's “distinct population segment” and “significant portion of range” clauses. Such a coordinated policy would enhance the ESA's effectiveness in stemming loss of biodiversity in the face of climate change and other factors altering Earth's ecosystems.

Population Health Management, Emerging Technologies, and the Science of the Individual

Population health management (PHM) has been a discipline that studies and facilitates care delivery across a group of individuals or the general population. In the context of PHM, the life science industry has had no motivation to design drugs or devices and even offer treatment of patient management that is only effective for a distinct population segment. The primary outgrowth of the science of individuality, as well as the rising ‘wiki medicine', fully recognizes the uniqueness of the individual. Cloud computing, big data, m-health, and recently, internet of things can offer the resources to deal with numerous shortcomings such as data collection and processing, of the PHM approach, as they facilitate the propagation of the science of individuality.

Anadromy Redux? Genetic Analysis to Inform Development of an Indigenous American River Steelhead Broodstock

The construction of dams and water diversions has severely limited access to spawning habitat for anadromous fishes. To mitigate for these impacts, hatchery programs rear and release millions of juvenile salmonids, including steelhead, the anadromous ecotype of the species Oncorhynchus mykiss. These programs sometimes use nonindigenous broodstock sources that may have negative effects on wild populations. In California, however, only one anadromous fish hatchery program currently uses nonnative broodstock: the steelhead program at Nimbus Fish Hatchery on the American River, a tributary of the Sacramento River in the California Central Valley. The goal of this study was to determine if potentially appropriate sources to replace the broodstock for the Nimbus Hatchery steelhead program exist in the Upper American River, above Nimbus and Folsom dams. We show that all Upper American River O. mykiss sampled share ancestry with other populations in the Central Valley steelhead distinct population segment, with limited introgression from out-of-basin sources in some areas. Furthermore, some Upper American River populations retain adaptive genomic variation associated with a migratory life history, supporting the hypothesis that these populations display adfluvial migratory behavior. Together, these results provide insights into the evolution of trout populations above barrier dams. We conclude that some Upper American River O. mykiss populations represent genetically appropriate sources from which fisheries managers could potentially develop a new broodstock for the Nimbus Hatchery steelhead program to reestablish a native anadromous population in the Lower American River and contribute to recovery of the threatened Central Valley steelhead distinct population segment.

Confirmed Observation: A North American Green Sturgeon Acipenser medirostris Recorded in the Stanislaus River, California

Two sturgeon species are native to the San Francisco Estuary watershed in California: White Sturgeon Acipenser transmontanus and North American Green Sturgeon Acipenser medirostris. The San Francisco Estuary has two main tributaries, the Sacramento and San Joaquin rivers. Recent studies have shown that the San Joaquin River is used by Green and White Sturgeon and that at least a small number of White Sturgeon spawn there when environmental conditions allow. However, records of Green Sturgeon in the San Joaquin River and its tributaries are rare and limited to information from angler report cards. In 2006, the National Marine Fisheries Service listed the southern distinct population segment of North American Green Sturgeon as threatened under the Endangered Species Act. Federally designated critical habitat for the southern distinct population segment of Green Sturgeon does not extend upstream of the San Joaquin River's confluence with the Stanislaus River. We recently confirmed an adult Green Sturgeon holding in a deep pool near Knights Ferry, California in the Stanislaus River. We observed and recorded the fish using a GoPro® video camera and used environmental deoxyribonucleic acid sampling techniques to confirm species identification. This paper provides the first confirmed record of Green Sturgeon in any tributary of the San Joaquin River, which is beyond the designated critical habitat area. Future well-designed research focused on the San Joaquin River and its tributaries is expected to improve our understanding regarding the importance of these rivers for the various life stages of North American Green Sturgeon.

Effects on the bycatch of eulachon and juvenile groundfish by altering the level of artificial illumination along an ocean shrimp trawl fishing line

We examined how catches of ocean shrimp (Pandalus jordani), eulachon (Thaleichthys pacificus), and juvenile groundfish could be affected by altering the level of artificial illumination along the fishing line of an ocean shrimp trawl. In the ocean shrimp trawl fishery, catches of eulachon are of special concern, as the species’ southern Distinct Population Segment is listed as “threatened” under the US Endangered Species Act. Using a double-rigged trawl vessel, with one trawl illuminated and the other unilluminated, we compared the catch efficiencies for ocean shrimp, eulachon, and juvenile groundfish between an unilluminated trawl and trawls illuminated with 5, 10, and 20 LED fishing lights along their fishing line. The addition of artificial illumination along the trawl fishing line significantly affected the average catch efficiency for eulachon, rockfish (Sebastes spp.), and flatfish, with the three LED configurations each catching significantly fewer individuals than the unilluminated trawl without impacting ocean shrimp catches. For Pacific hake (Merluccius productus), the ten LED-configured trawl caught significantly more fish than the unilluminated trawl. For the five and 20 LED configurations, mean Pacific hake catches did not differ from the unilluminated trawl. This study contributes new data on how artificial illumination can affect eulachon catches (and other fish) and contribute to their conservation.