glacial refuge
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Chemoecology ◽  
2021 ◽  
Author(s):  
Victoria C. Moris ◽  
Katharina Christmann ◽  
Aline Wirtgen ◽  
Sergey A. Belokobylskij ◽  
Alexander Berg ◽  
...  

AbstractThe mason wasp Odynerus spinipes shows an exceptional case of intrasexual cuticular hydrocarbon (CHC) profile dimorphism. Females of this species display one of two CHC profiles (chemotypes) that differ qualitatively and quantitatively from each other. The ratio of the two chemotypes was previously shown to be close to 1:1 at three sites in Southern Germany, which might not be representative given the Palearctic distribution of the species. To infer the frequency of the two chemotypes across the entire distributional range of the species, we analyzed with GC–MS the CHC profile of 1042 dry-mounted specimens stored in private and museum collections. We complemented our sampling by including 324 samples collected and preserved specifically for studying their CHCs. We were capable of reliably identifying the chemotypes in 91% of dry-mounted samples, some of which collected almost 200 years ago. We found both chemotypes to occur in the Far East, the presumed glacial refuge of the species, and their frequency to differ considerably between sites and geographic regions. The geographic structure in the chemotype frequencies could be the result of differential selection regimes and/or different dispersal routes during the colonization of the Western Palearctic. The presented data pave the route for disentangling these factors by providing information where to geographically sample O. spinipes for population genetic analyses. They also form the much-needed basis for future studies aiming to understand the evolutionary and geographic origin as well as the genetics of the astounding CHC profile dimorphism that O. spinipes females exhibit.


2020 ◽  
Author(s):  
Victoria C. Moris ◽  
Katharina Christmann ◽  
Aline Wirtgen ◽  
Sergey A. Belokobylskij ◽  
Alexander Berg ◽  
...  

AbstractThe mason wasp Odynerus spinipes shows an exceptional case of intrasexual CHC dimorphism. Females of this species express one of two cuticular hydrocarbon (CHC) profiles (chemotypes) that differ qualitatively and quantitatively from each other. The ratio of the two chemotypes was previously shown to be close to 1:1 at three sites in Southern Germany, which might not be representative given the Palearctic distribution of the species. To infer the frequency of the two chemotypes across the entire distributional range of the species, we analyzed with GC-MS the CHC profiles of 1,042 dry-mounted specimens stored in private and museum collections. We complemented our sampling by including 324 samples collected and preserved specifically for studying their CHCs. We were capable of reliably identifying the chemotypes in 91% of dry-mounted samples, some of which collected almost 200 years ago. We found both chemotypes to occur in the Far East, the presumed glacial refuge of the species, and their frequency to differ considerably between sites and geographic regions. The geographic structure in the chemotype frequencies could be the result of differential selection regimes and/or different dispersal routes during the colonization of the Western Palearctic. The presented data pave the route for disentangling these factors by providing information where to geographically sample O. spinipes for population genetic analyses. They also form the much-needed basis for future studies aiming to understand the evolutionary and geographic origin as well as the genetics of the astounding CHC dimorphism that O. spinipes females exhibit.


Plants ◽  
2020 ◽  
Vol 9 (8) ◽  
pp. 1035 ◽  
Author(s):  
Loredana Abbate ◽  
Francesco Mercati ◽  
Giuseppe Di Noto ◽  
Myriam Heuertz ◽  
Francesco Carimi ◽  
...  

The cosmopolitan genus Fraxinus comprises about 40 species occupying several habitats in the Northern Hemisphere. With some species hybridizing and sharing genetic variants, questions remain on the species assignment of germplasm within the genus Fraxinus despite numerous species-specific assessments. A multidisciplinary approach was employed to provide a definitive insight into the genetics of an endangered Fraxinus “manna ash” collection, located in a rich plant biodiversity hotspot of the Madonie Mountains (Sicily). Although the collection size was small, genetic diversity, assessed by chloroplast (cpSSR) and nuclear (nSSR) microsatellites (SSR—Simple Sequence Repeats), allowed identifying three different chloroplast haplotypes, with one (H5) dominant, and several polymorphic loci, able to discriminate most of the local accessions studied. Molecular data were linked to cytofluorimetric and phenotypic evaluations and, contrary to popular belief that manna ash is Fraxinus ornus L., the germplasm currently used for manna production belongs to Fraxinus angustifolia Vahl. Interestingly, joint analysis of our genetic panel with a large European dataset of Fraxinus spp. suggested the presence of a possible glacial refuge in Sicily, confirming its importance as biodiversity source. Our results will be helpful for the design of long-term conservation programs for genetic resources, such as in situ and ex situ conservation, seed collection and tree reintroduction.


2020 ◽  
Vol 77 (5) ◽  
pp. 1906-1913 ◽  
Author(s):  
Nathan G King ◽  
Niall J McKeown ◽  
Dan A Smale ◽  
Sunny Bradbury ◽  
Thomas Stamp ◽  
...  

Abstract Kelp are foundation species threatened by ongoing warming trends and increased harvesting pressure. This emphasizes the need to study genetic structure over various spatial scales to resolve demographic and genetic processes underpinning resilience. Here, we investigate the genetic diversity in the kelp, Laminaria digitata, in previously understudied southern (trailing-edge) and northern (range-centre) regions in the Northeastern Atlantic Ocean. There was strong hierarchical spatial structuring with significantly lower genetic variability and gene flow among southern populations. As these span the area of the Hurd’s deep Pleistocene glacial refuge, the current low variation likely reflects a fraction of previous levels that has been eroded at the species southern edge. Northern variability and private alleles also indicate contributions from cryptic northern glacial refugia. Contrary to expectations of a positive relationship between neutral genetic diversity and resilience, a previous study reported individuals from the same genetically impoverished southern populations to be better adapted to cope with thermal stress than northern individuals. This not only demonstrates that neutral genetic diversity may be a poor indicator of resilience to environmental stress but also confirms that extirpation of southern populations will result in the loss of evolved, not just potential, adaptations for resilience.


2019 ◽  
Vol 17 (4) ◽  
pp. 385-401
Author(s):  
Yan Li ◽  
Feng Song ◽  
Xue-Ni Zhang ◽  
Guang-Hui Lv
Keyword(s):  

2019 ◽  
Vol 23 (2) ◽  
pp. 232-238
Author(s):  
A. P. Kryukov

Natural hybridization increases a lot phenotypic and genetic diversity and shapes intra-species patterns, which is a subject of phylogeography. We studied mitochondrial and complete genome variation in the bird family Corvidae, genera Corvus, Pica, Cyanopica, Perisoreus and Nucifraga. In the classic case of natural hybridization between carrion and hooded crows in Siberia, we found no decreased fitness of hybrids, but instead positive assortative mating which should restrict hybrid zone width. Several genetic markers were unable to discriminate between pure carrion and hooded crows. Mitochondrial DNA sequences revealed no difference between carrion and hooded crows, but instead two diverged haplogroups within the eastern part of the distribution range of the carrion crow. NGS resulted in a clear pattern of diversification of pure forms and hybrids (by using SNPs), and showed genomic regions of increased variability, the so-called “speciation islands”. Comparing European and Siberian crow hybrid zones, differences in genome regions bearing genes of melanogenesis supposedly under divergent selection were found. Comparative phylogeographic analysis of 10 widely distributed Palearctic species revealed two kinds of patterns: one with a division into two haplogroups, western and eastern, and another one without such a division. These two phylogeographic patterns might be explained by different habitat preferences: mainly open fields for the first group and forests for the second one. One glacial refuge was assigned to the latter group, while west-east group species might have survived in several refuges. One of such species, the Eurasian magpie (Pica pica) has a gap in its range in Transbaikalia, which is currently shrinking before our eyes. The two subspecies divided by this gap differ in phenotype, mtDNA and vocalization. In their young contact zone, some hybridization occurs with small introgression limited by certain post-zygotic isolation.


2018 ◽  
Vol 184 ◽  
pp. 5-25 ◽  
Author(s):  
Simon Blockley ◽  
Maura Pellegrini ◽  
Andre C. Colonese ◽  
Domenico Lo Vetro ◽  
Paul G. Albert ◽  
...  

Zootaxa ◽  
2017 ◽  
Vol 4232 (2) ◽  
pp. 216 ◽  
Author(s):  
ALEXEI V. ABRAMOV ◽  
ANNA A. BANNIKOVA ◽  
VLADIMIR S. LEBEDEV ◽  
VIATCHESLAV V. ROZHNOV

We analyzed the complete mitochondrial cytochrome b (cytb) gene and fragments of four nuclear loci: ApoB, RAG2, IRBP1 and BRCA1. These data allowed us to provide new insights into the diversity of the Asiatic water shrews of Indochina. A new, highly divergent genetic lineage of Chimarrogale was found in southern Vietnam, and this lineage included specimens from the provinces of Kon Tum, Dak Lak, and Lam Dong. Such finding represents the newest and southernmost records of Chimarrogale in Indochina. Morphological analysis classified the specimens from southern Vietnam as C. varennei proper, which is restricted to that region, whereas the polymorphic C. himalayica, which contained at least four cytochrome b haplogroups, occurred in central and northern Vietnam and southern China. This distinct C. varennei lineage closely related to the C. platycephalus + C. leander clade suggests the existence of an unknown glacial refuge in Tay Nguyen Plateau, southern Vietnam. Because the Bornean C. phaeura (i) was sister-group of the rest of Chimarrogale sensu lato and (ii) had a high genetic divergence (~15% for cytochrome b) and geographical isolation, we suggest that C. phaeura be placed into a separate genus, Crossogale Thomas, 1921. This genus should also include C. sumatrana (Sumatra) and C. hantu (Peninsular Malaysia). On those grounds, we propose a new classification system for Asiatic water shrews. 


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