Lower promoter activity of the ST8SIA2 gene has been favored in evolving human collective brains

ST8SIA2 is an important molecule regulating expression of the phenotype involved in schizophrenia. Lowered promoter activity of the ST8SIA2 gene is considered to be protective against schizophrenia by conferring tolerance to psychosocial stress. Here, we examined the promoter-type composition of anatomically modern humans (AMHs) and archaic humans (AHs; Neanderthals and Denisovans), and compared the promoter activity at the population level (population promoter activity; PPA) between them. In AMHs, the TCT-type, showing the second lowest promoter activity, was most prevalent in the ancestral population of non-Africans. However, the detection of only the CGT-type from AH samples and recombination tracts in AH sequences showed that the CGT- and TGT-types, exhibiting the two highest promoter activities, were common in AH populations. Furthermore, interspecies gene flow occurred into AMHs from AHs and into Denisovans from Neanderthals, influencing promoter-type compositions independently in both AMHs and AHs. The difference of promoter-type composition makes PPA unique in each population. East and Southeast Asian populations show the lowest PPA. This results from the selective increase of the CGC-type, showing the lowest promoter activity, in these populations. Every non-African population shows significantly lower PPA than African populations, resulting from the TCT-type having the highest prevalence in the ancestral population of non-Africans. In addition, PPA reduction is also found among subpopulations within Africa via a slight increase of the TCT-type. These findings indicate a trend toward lower PPA in the spread of AMHs, interpreted as a continuous adaptation to psychosocial stress arising in migration. This trend is considered as genetic tuning for the evolution of collective brains. The inferred promoter-type composition of AHs differed markedly from that of AMHs, resulting in higher PPA in AHs than in AMHs. This suggests that the trend toward lower PPA is a unique feature in AMH spread.

Between two worlds: Cova Eirós and the Middle-Upper Palaeolithic transition in NW Iberia

Iberia, a natural cul-de-sac peninsula, plays a major role in the study of the Neanderthals demise and its eventual relationship with the spread of Anatomically Modern Humans (AMH) in Europe. The site of Cova Eirós (Galicia, Spain), located in NW Iberia, contains Middle and Upper Palaeolithic levels, based on the cultural remains recovered at the site. No human remains directly associated with those levels were discovered yet. The available radiocarbon dates from the levels 2 (c. 35 ka cal BP, Early Upper Paleolithic) and 3 (c. 41 ka cal BP, Late Middle Paleolithic), point to a late survival of Neanderthal groups in North Iberia and to a relative quick arrival of the AMH, c. 35-36 ka cal BP, with respect to other territories of the Iberian Peninsula. The archaeological record shows clear differences between the Middle and the Upper Palaeolithic occupations, regarding raw-material acquisition, lithic technology and subsistence strategies. The location of Cova Eirós in the westernmost margin of the Cantabrian Rim and in the Atlantic Façade, makes this site a key place to understand the spread of the first AMH and the progressive demise of Neanderthal populations.

New insights into the Upper Palaeolithic of the Caucasus through the study of personal ornaments. Teeth and bones pendants from Satsurblia and Dzudzuana caves (Imereti, Georgia)

The region of western Georgia (Imereti) in the Southern Caucasus has been a major geographic corridor for human migrations during the Middle and Upper Paleolithic. Data of recent research and excavations in this region display its importance as a possible route for the dispersal of anatomically modern humans (AMH) into northern Eurasia. Nevertheless, within the local research context, bone-working and personal ornaments have yet contributed but little to the Upper Palaeolithic (UP) regional sequence’s characterization. Here we present an archaeozoological, technological and use-wear study of pendants from two local UP assemblages, originating in the Dzudzuana Cave and Satsurblia Cave. The ornaments were made mostly of perforated teeth, though some specimens were made on bone. Both the manufacturing marks made during preparation and use-wear traces indicate that they were personal ornaments, used as pendants or attached to garments. Detailed comparison between ornament assemblages from northern and southern Caucasus reveal that they are quite similar, supporting the observation of cultural bonds between the two regions, demonstrated previously through lithic techno-typological affinities. Furthermore, our study highlights the importance attributed to red deer (Cervus elaphus) by the UP societies of the Caucasus in sharing aesthetic values and/or a symbolic sphere.

Decreases in Brain Size and Encephalization in Anatomically Modern Humans

Growth in human brain size and encephalization is well documented throughout much of prehistory and believed to be responsible for increasing cognitive faculties. Over the past 50,000 years, however, both body size and brain mass have decreased but little is known about the scaling relationship between the two. Here, changes to the human brain are examined using matched body remains to determine encephalization levels across an evolutionary timespan. The results find decreases to encephalization levels in modern humans as compared to earlier Holocene <i>H. sapiens</i> and Late Pleistocene anatomically modern <i>Homo</i>. When controlled for lean body mass, encephalization changes are isometric, suggesting that much of the declines in encephalization are driven by recent increases in obesity. A meta-review of genome-wide association studies finds some evidence for selective pressures acting on human cognitive ability, which may be an evolutionary consequence of the more than 5% loss in brain mass over the past 50,000 years.

Female craniometrics support the ‘two-layer model’ of human dispersal in Eastern Eurasia

This study reports a cranio-morphometric analysis of female human remains from seven archaeological sites in China, Vietnam and Taiwan that date between 16,000 and 5300 BP. The aim of the analysis is to test the “two-layer” model of human dispersal in eastern Eurasia, using previously unanalysed female remains to balance the large sample of previously-analysed males. The resulting craniometric data indicate that the examined specimens all belong to the “first layer” of dispersal, and share a common ancestor with recent Australian and Papuan populations, and the ancient Jomon people of Japan. The analysed specimens pre-date the expansion of agricultural populations of East/Northeast Asian origin—that is, the “second layer” of human dispersal proposed by the model. As a result of this study, the two-layer model, which has hitherto rested on evidence only from male skeletons, is now strongly supported by female-derived data. Further comparisons reveal that the people of the first layer were closer in terms of their facial morphology to modern Africans and Sri Lankan Veddah than to modern Asians and Europeans, suggesting that the Late Pleistocene through Middle Holocene hunter-gatherers examined in this study were direct descendants of the anatomically modern humans who first migrated out of Africa through southern Eurasia.

THE JU /’HOANSI WAY OF HUNTING LARGE ANIMALS

About the loss of many genera of large mammals in the last 50 thousand years worldwide, the hypothesis of animal extinction due to overkill arose in the 60s. According to the defenders of this hypothesis, the results of overkill were rapid extinctions or extinctions that occurred after a slow population decline, depending on animal vulnerability. I revisit ethnographic studies with Ju/’hoan hunter-gatherers, made between the 50s and 70s, to inquire about their ways of hunting large animals in a region of the Kalahari in southern Africa. The Ju/’hoan hunters capture a great diversity of animal species but have a preference for large animals, even when they are not easy to hunt, because they contribute to the survival of all the members of each camp. In my opinion, the ethnographic information strengthens the idea of the importance of hunting large animals for the groups of anatomically modern humans that expanded out of Africa after 100 ka ago.

Genetic and climatic factors in the dispersal of Anatomically Modern Humans Out of Africa

The evolutionarily recent dispersal of Anatomically Modern Humans (AMH) out of Africa and across Eurasia provides an opportunity to study rapid genetic adaptation to multiple new environments. Genomic analyses of modern human populations have detected limited signals of strong selection such as hard sweeps, but genetic admixture between populations is capable of obscuring these patterns and is well known in recent human history, such as during the Bronze Age4. Here we show that ancient human genomic datasets contain multiple genetic signatures of strong selection including 57 hard sweeps, many with strong associations with cold adaptation. Similar genetic signatures of adaptation are also observed in adaptively-introgressed archaic hominin loci, as well as modern Arctic human groups. Consistent targets include the regulation of fat storage, skin physiology, cilia function and neural development; with multiple associations to modern western diseases. The spatiotemporal patterns of the hard sweeps allow reconstruction of early AMH population dispersals, and reveal a prolonged period of genetic adaptation (~80-50,000 years) following their initial out of Africa movement, before a rapid spread across Eurasia reaching as far as Australia.

Cave and rock shelter sediments of southern Africa: a review of the chronostratigraphic and palaeoenvironmental record from Marine Isotope Stage 6 to 1

Caves and rock shelters contribute important records to local, regional and sub-continental reconstructions of environment and climate change through the southern African Quaternary. Against a backdrop of pronounced climate change, the archaeological record of the Marine Isotope Stage 6 to 1 period in southern Africa documents a remarkable time in the behavioural and technological evolution of anatomically modern humans. Significant evidence of this evolution is represented in diverse components of the sedimentary record in caves and rock shelters in the region. We present a catalogue of published caves and rock shelters in southern Africa that preserve temporally-relevant clastic and chemical palaeoclimatic proxies in order to: (1) facilitate the integration of cave and rock shelter sedimentary data into broader, regional chronostratigraphically-correlated palaeoclimatic sequences; and (2) identify possible areas and proxies that require focused research in the future. To demonstrate the complexity of the Marine Isotope Stage 6 to 1 stratigraphic record and use of palaeoenvironmental proxies, we present three case studies representing interior and coastal contexts: Border Cave, Klasies River Mouth and Pinnacle Point. These examples aptly demonstrate the challenges of these contexts, but also the opportunities for palaeoenvironmental research in southern Africa when conducted through integrated, multidisciplinary approaches. Published records of palaeoenvironmental research from cave and rock shelter sequences in southern Africa are heavily biased to the South African coastal areas and the record is temporally and spatially fragmented. However, there are interesting patterns in the chronostratigraphic record and in the distribution of sites within the context of the geology and vegetation ecology of southern Africa that require further exploration. There are also promising techniques in stable isotope analysis that can be applied to abundant sedimentary components found in the region’s caves and rock shelters, and in its museums.

Can Unlikely Neanderthal Chloride Channel CLC-2 Gene Variants Provide Insights in Modern Human Infertility?

Background/Aims: Neanderthals, although well adapted to local environments, were rapidly replaced by anatomically modern humans (AMH) for unknown reasons. Genetic information on Neanderthals is limited restricting applicability of standard population genetics. Methods: Here, we apply a novel combination of restricted genetic analyses on preselected physiological key players (ion channels), electrophysiological analyses of gene variants of unclear significance expressed in Xenopus laevis oocytes using two electrode voltage clamp and transfer of results to AMH genetics. Using genetic screening in infertile men identified a loss of CLC-2 associated with sperm deficiency. Results: Increased genetic variation caused functionally impaired Neanderthals CLC-2 channels. Conclusion: Increased genetic variation could reflect an adaptation to different local salt supplies at the cost of reduced sperm density. Interestingly and consistent with this hypothesis, lack of CLC-2 protein in a patient associates with high blood K+ concentration and azoospermia.