Underwater Light Characteristics of Turbid Coral Reefs of the Inner Central Great Barrier Reef

Hyper-spectral and multi-spectral light sensors were used to examine the effects of elevated suspended sediment concentration (SSC) on the quantity and quality (spectral changes) of underwater downwelling irradiance in the turbid-zone coral reef communities of the inner, central Great Barrier Reef (GBR). Under elevated SSCs the shorter blue wavelengths were preferentially attenuated which together with attenuation of longer red wavelengths by pure water shifted the peak in the underwater irradiance spectrum ~100 nm to the less photosynthetically useful green-yellow waveband (peaking at ~575 nm). The spectral changes were attributed to mineral and detrital content of the terrestrially-derived coastal sediments as opposed to chromophoric (coloured) dissolved organic matter (CDOM). A simple blue to green (B/G, λ455:555 nm) ratio was shown to be useful in detecting sediment (turbidity) related decreases in underwater light as opposed to those associated with clouds which acted as neutral density filters. From a series of vertical profiles through turbid water, a simple, multiple component empirical optical model was developed that could accurately predict the light reduction and associated spectral changes as a function of SSC and water depth for a turbid-zone coral reef community of the inner GBR. The relationship was used to assess the response of a light sensitive coral, Pocillopora verrucosa in a 28-d exposure laboratory-based exposure study to a daily light integral of 1 or 6 mol quanta m2. PAR with either a broad spectrum or a green-yellow shifted spectrum. Light reduction resulted in a loss of the algal symbionts (zooxanthellae) of the corals (bleaching) and significant reduction in growth and lipid content. The 6 mol quanta m2 d−1 PAR treatment with a green-yellow spectrum also resulted in a reduction in the algal density, Chl a content per cm2, lipids and growth compared to the same PAR daily light integral under a broad spectrum. Turbid zone coral reef communities are naturally light limited and given the frequency of sediment resuspension events that occur, spectral shifts are a common and previously unrecognised circumstance. Dedicated underwater light monitoring programs and further assessment of the spectral shifts by suspended sediments are essential for contextualising and further understanding the risk of enhanced sediment run-off to the inshore turbid water communities.

Bryozoa from the reefs off the Amazon River mouth: checklist, thirteen new species, and notes on their ecology and distribution

The reef system off the Amazon River mouth extends from Amapá state to Maranhão state along the Brazilian Equatorial Margin, encompassing more than 10,000 km2 of rhodolith beds and high-relief hard structures on the outer shelf and upper slope. This unique hard bottom mosaic is remarkable for being influenced by the turbid and hyposaline plume from the world’s largest river, and also for representing a connectivity corridor between the Caribbean and Brazil. Bryozoans were recently recognized as major reef builders in the Southwestern Atlantic, but their diversity off the Amazon River mouth remained unknown. Here, we report on recent collections obtained from 23 to 120 m depth in Northern Brazil. Sixty-five bryozoan taxa were characterized using scanning electron microscopy, including 57, five and three taxa of Cheilostomatida, Cyclostomatida and Ctenostomatida, respectively. Cribrilaria smitti and three genera (Cranosina, Glabrilaria and Thornelya) are new records for Brazil, and 13 new species are herein described: Antropora cruzeiro n. sp., Cranosina gilbertoi n. sp., Cribrilaria lateralis n. sp., Crisia brasiliensis n. sp., Glabrilaria antoniettae n. sp., Micropora amapaensis n. sp., Parasmittina amazonensis n. sp., Plesiocleidochasma arcuatum n. sp., Poricella bifurcata n. sp., Pourtalesella duoavicularia n. sp., Stephanollona domuspusilla n. sp., Therenia dianae n. sp., and Thornelya atlanticoensis n. sp. Our results highlight the biodiversity significance of the Amazon reefs and the need for more comprehensive sampling to clarify the role of bryozoans in modern turbid-zone reefs and rhodolith beds.

Decadal (2006-2018) dynamics of Southwestern Atlantic’s largest turbid zone reefs

Tropical reefs are declining rapidly due to climate changes and local stressors such as water quality deterioration and overfishing. The so-called marginal reefs sustain significant coral cover and growth but are dominated by fewer species adapted to suboptimal conditions to most coral species. However, the dynamics of marginal systems may diverge from that of the archetypical oligotrophic tropical reefs, and it is unclear whether they are more or less susceptible to anthropogenic stress. Here, we present the largest (100 fixed quadrats at five reefs) and longest time series (13 years) of benthic cover data for Southwestern Atlantic turbid zone reefs, covering sites under contrasting anthropogenic and oceanographic forcing. Specifically, we addressed how benthic cover changed among habitats and sites, and possible dominance-shift trends. We found less temporal variation in offshore pinnacles’ tops than on nearshore ones and, conversely, higher temporal fluctuation on offshore pinnacles’ walls than on nearshore ones. In general, the Abrolhos reefs sustained a stable coral cover and we did not record regional-level dominance shifts favoring other organisms. However, coral decline was evidenced in one reef near a dredging disposal site. Relative abundances of longer-lived reef builders showed a high level of synchrony, which indicates that their dynamics fluctuate under similar drivers. Therefore, changes on those drivers could threaten the stability of these reefs. With the intensification of thermal anomalies and land-based stressors, it is unclear whether the Abrolhos reefs will keep providing key ecosystem services. It is paramount to restrain local stressors that contributed to coral reef deterioration in the last decades, once reversal and restoration tend to become increasingly difficult as coral reefs degrade further and climate changes escalate.

Protection of Turbidity on Reefs along the Southeast Coast of the Kalimantan during the 2015 El Niño

Coral reef, the most diverse and highly valuable marine ecosystem, may be influenced by bleaching. This study aimed to determine the effect of turbidity on the severity of coral bleaching and mortality due to thermal stress and high solar irradiation caused by the 2015 El Niño event. Coral colonies in eighteen permanent bleaching belt transects (50 m x 1 m) in six sites were observed from June to November 2015, coinciding with the 2015 El Niño event. Environmental factors: water depth, sea surface temperature (SST), salinity, turbidity, sedimentation and total suspended solid (TSS) were measured on the same transect. The results of the study showed that the 2015 El Niño event was a major disaster for reefs on the southeast coast of the Kalimantan. Of total colonies (N = 12,954), 45.4% of colonies were bleached and 14.7% of colonies died during the period of July to November 2015. Turbidity, TSS, and sedimentation were negatively correlated with the bleaching mortality index (BMI). Coral bleaching in clear and deep waters occurred earlier and increased rapidly compared to that in turbid waters. However, the severity of coral bleaching in the turbid zone increased dramatically when the turbidity dropped to <3 NTU. Turbidity >5 NTU could provide shade, in which the proportion of dead corals was only 3.5%. The severity of coral bleaching in the turbid zone is not solely due to thermal stress and solar irradiation; it may also be influenced by a history of exposure to high turbidity and low salinity.

Screening and quantification of anti-quorum sensing and antibiofilm activities of phyllosphere bacteria against biofilm forming bacteria

Objective The objectives of this research were to screen anti-quorum sensing activity of phyllosphere bacteria and quantify their antibiofilm activity against biofilm forming bacteria (Bacillus cereus, Staphylococcus aureus, Enterococcus faecalis, Salmonella typhimurium, Vibrio cholerae, Pseudomonas aeruginosa). Results We found 11 phyllosphere bacteria isolates with potential anti-quorum sensing activity. Most of the crude extracts from phyllosphere bacteria isolates had anti-quorum sensing activity against Chromobacterium violaceum at certain concentration (20 and 10 mg/mL), but not crude extract from isolate JB 7F. Crude extract showed the largest turbid zone (1,27 cm) using isolate JB 14B with concentration of 10 mg/mL and the narrowest turbid zone isolate (1 cm) using JB 18B with concentration of 10 mg/mL. Crude extracts showed various antibiofilm activities against all tested pathogenic bacteria, it showed the highest biofilm inhibition (90%) and destruction activities (76%) against S. aureus.

Long-term effects of competition and environmental drivers on the growth of the endangered coral Mussismilia braziliensis (Verril, 1867)

Most coral reefs have recently experienced acute changes in benthic community structure, generally involving dominance shifts from slow-growing hard corals to fast-growing benthic invertebrates and fleshy photosynthesizers. Besides overfishing, increased nutrification and sedimentation are important drivers of this process, which is well documented at landscape scales in the Caribbean and in the Indo-Pacific. However, small-scale processes that occur at the level of individual organisms remain poorly explored. In addition, the generality of coral reef decline models still needs to be verified on the vast realm of turbid-zone reefs. Here, we documented the outcome of interactions between an endangered Brazilian-endemic coral (Mussismilia braziliensis) and its most abundant contacting organisms (turf, cyanobacteria, corals, crustose coralline algae and foliose macroalgae). Our study was based on a long (2006–2016) series of high resolution data (fixed photoquadrats) acquired along a cross-shelf gradient that includes coastal unprotected reefs and offshore protected sites. The study region (Abrolhos Bank) comprises the largest and richest coralline complex in the South Atlantic, and a foremost example of a turbid-zone reef system with low diversity and expressive coral cover. Coral growth was significantly different between reefs. Coral-algae contacts predominated inshore, while cyanobacteria and turf contacts dominated offshore. An overall trend in positive coral growth was detected from 2009 onward in the inshore reef, whereas retraction in live coral tissue was observed offshore during this period. Turbidity (+) and cyanobacteria (−) were the best predictors of coral growth. Complimentary incubation experiments, in which treatments of Symbiodinium spp. from M. braziliensis colonies were subjected to cyanobacterial exudates, showed a negative effect of the exudate on the symbionts, demonstrating that cyanobacteria play an important role in coral tissue necrosis. Negative effects of cyanobacteria on living coral tissue may remain undetected from percent cover estimates gathered at larger spatial scales, as these ephemeral organisms tend to be rapidly replaced by longer-living macroalgae, or complex turf-like consortia. The cross-shelf trend of decreasing turbidity and macroalgae abundance suggests either a direct positive effect of turbidity on coral growth, or an indirect effect related to the higher inshore cover of foliose macroalgae, constraining cyanobacterial abundance. It is unclear whether the higher inshore macroalgal abundance (10–20% of reef cover) is a stable phase related to a long-standing high turbidity background, or a contemporary response to anthropogenic stress. Our results challenge the idea that high macroalgal cover is always associated with compromised coral health, as the baselines for turbid zone reefs may derive sharply from those of coral-dominated reefs that dwell under oligotrophic conditions.

SINGLE CHANNEL SEISMIC APPLICATION FOR GAS CHARGED SEDIMENT RECONNAISSANCE IN GEOHAZARD STUDY OF PORT CONSTRUCTION AT WETLAND AREA

<p class="abstrak">Gas charged sediment as a one of parameter for geohazard study in infrastructure especially in swamp area. Instability of sediment layer for exampel subsidence and landslide result in geohazard potention that caused by gas charged sediment. Seismic single channel can be used to identufy gas charged sediment location. Seabed morphology is collected from bathymetry and tidal survey. From seismic profile interpretation shows gas charged sediment indication in Line A and Line B. That indication emerged by presence of acoustic turbid zone and acoustic blanking. Line A and Line B location will be spotlight in next geotechnic port construction study.</p><p> </p>