Evolution-In-Materio: Solving Machine Learning Classification Problems Using Materials

2014 ◽  
pp. 721-730 ◽  
Author(s):  
Maktuba Mohid ◽  
Julian Francis Miller ◽  
Simon L. Harding ◽  
Gunnar Tufte ◽  
Odd Rune Lykkebø ◽  
...  
Keyword(s):  
Machine Learning ◽  
Classification Problems ◽  
Machine Learning Classification

scholarly journals A Novel Performance Measure for Machine Learning Classification

2021 ◽  
Vol 13 (1) ◽  
pp. 11-19
Author(s):  
Mingxing Gong
Keyword(s):  
Machine Learning ◽  
Performance Measures ◽  
Critical Role ◽  
Model Development ◽  
Performance Measure ◽  
Classification Problems ◽  
Comprehensive Overview ◽  
Machine Learning Classification ◽  
And Performance ◽  
Evaluation Metric

Machine learning models have been widely used in numerous classification problems and performance measures play a critical role in machine learning model development, selection, and evaluation. This paper covers a comprehensive overview of performance measures in machine learning classification. Besides, we proposed a framework to construct a novel evaluation metric that is based on the voting results of three performance measures, each of which has strengths and limitations. The new metric can be proved better than accuracy in terms of consistency and discriminancy.

scholarly journals Multi-Level Comparison of Machine Learning Classifiers and Their Performance Metrics

Molecules ◽  
2019 ◽  
Vol 24 (15) ◽  
pp. 2811 ◽  
Author(s):  
Rácz ◽  
Bajusz ◽  
Héberger
Keyword(s):  
Machine Learning ◽  
Performance Metrics ◽  
Learning Algorithm ◽  
Classification Problems ◽  
Machine Learning Classification ◽  
Learning Tasks ◽  
Sum Of Ranking Differences ◽  
Multi Level

Machine learning classification algorithms are widely used for the prediction and classification of the different properties of molecules such as toxicity or biological activity. the prediction of toxic vs. non-toxic molecules is important due to testing on living animals, which has ethical and cost drawbacks as well. The quality of classification models can be determined with several performance parameters. which often give conflicting results. In this study, we performed a multi-level comparison with the use of different performance metrics and machine learning classification methods. Well-established and standardized protocols for the machine learning tasks were used in each case. The comparison was applied to three datasets (acute and aquatic toxicities) and the robust, yet sensitive, sum of ranking differences (SRD) and analysis of variance (ANOVA) were applied for evaluation. The effect of dataset composition (balanced vs. imbalanced) and 2-class vs. multiclass classification scenarios was also studied. Most of the performance metrics are sensitive to dataset composition, especially in 2-class classification problems. The optimal machine learning algorithm also depends significantly on the composition of the dataset.

scholarly journals A survey of dimension reduction and classification methods for RNA-Seq data on malaria vector

2021 ◽  
Vol 8 (1) ◽  
Author(s):  
Micheal Olaolu Arowolo ◽  
Marion Olubunmi Adebiyi ◽  
Charity Aremu ◽  
Ayodele A. Adebiyi
Keyword(s):  
Machine Learning ◽  
Early Stage ◽  
Integrated Analysis ◽  
Classification Methods ◽  
Rna Seq ◽  
Classification Problems ◽  
Machine Learning Classification ◽  
Reduction Techniques ◽  
Dimensionality Reduction Techniques ◽  
Huge Challenge

AbstractRecently unique spans of genetic data are produced by researchers, there is a trend in genetic exploration using machine learning integrated analysis and virtual combination of adaptive data into the solution of classification problems. Detection of ailments and infections at early stage is of key concern and a huge challenge for researchers in the field of machine learning classification and bioinformatics. Considerate genes contributing to diseases are of huge dispute to a lot of researchers. This study reviews various works on Dimensionality reduction techniques for reducing sets of features that groups data effectively with less computational processing time and classification methods that contributes to the advances of RNA-Sequencing approach.

A Comparative Study of Different Machine Learning Algorithms for Disease Prediction

2017 ◽  
Vol 7 (7) ◽  
pp. 172
Author(s):  
Anantvir Singh Romana
Keyword(s):  
Machine Learning ◽  
Subsequent Treatment ◽  
Machine Learning Algorithms ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
Disease Prediction ◽  
Classification Problems ◽  
Learning Techniques ◽  
Neural Network Classifiers ◽  
Diagnostic Detection

Accurate diagnostic detection of the disease in a patient is critical and may alter the subsequent treatment and increase the chances of survival rate. Machine learning techniques have been instrumental in disease detection and are currently being used in various classification problems due to their accurate prediction performance. Various techniques may provide different desired accuracies and it is therefore imperative to use the most suitable method which provides the best desired results. This research seeks to provide comparative analysis of Support Vector Machine, Naïve bayes, J48 Decision Tree and neural network classifiers breast cancer and diabetes datsets.

Intelligent Techniques Analysis for Glycosylation Site Prediction

2021 ◽  
Vol 15 ◽  
Author(s):  
Alhassan Alkuhlani ◽  
Walaa Gad ◽  
Mohamed Roushdy ◽  
Abdel-Badeeh M. Salem
Keyword(s):  
Machine Learning ◽  
Prediction Models ◽  
Cell Interaction ◽  
Glycosylation Site ◽  
Machine Learning Classification ◽  
Site Prediction ◽  
Glycosylation Sites ◽  
Wide Range ◽  
Feature Extraction And Selection ◽  
Computational Intelligent

Background: Glycosylation is one of the most common post-translation modifications (PTMs) in organism cells. It plays important roles in several biological processes including cell-cell interaction, protein folding, antigen’s recognition, and immune response. In addition, glycosylation is associated with many human diseases such as cancer, diabetes and coronaviruses. The experimental techniques for identifying glycosylation sites are time-consuming, extensive laboratory work, and expensive. Therefore, computational intelligence techniques are becoming very important for glycosylation site prediction. Objective: This paper is a theoretical discussion of the technical aspects of the biotechnological (e.g., using artificial intelligence and machine learning) to digital bioinformatics research and intelligent biocomputing. The computational intelligent techniques have shown efficient results for predicting N-linked, O-linked and C-linked glycosylation sites. In the last two decades, many studies have been conducted for glycosylation site prediction using these techniques. In this paper, we analyze and compare a wide range of intelligent techniques of these studies from multiple aspects. The current challenges and difficulties facing the software developers and knowledge engineers for predicting glycosylation sites are also included. Method: The comparison between these different studies is introduced including many criteria such as databases, feature extraction and selection, machine learning classification methods, evaluation measures and the performance results. Results and conclusions: Many challenges and problems are presented. Consequently, more efforts are needed to get more accurate prediction models for the three basic types of glycosylation sites.

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