The solid state physical theory of cytochrome oxidase kinetics. Inhibition of second order rate constant, and second to first order kinetic shift with increasing oxygen, predicted from electron injection and trapping

1971 ◽  
Vol 33 (4) ◽  
pp. 579-588 ◽  
Author(s):  
Freeman W. Cope
Keyword(s):  
Solid State ◽  
Cytochrome Oxidase ◽  
Rate Constant ◽  
Physical Theory ◽  
Electron Injection ◽  
Order Rate Constant ◽  
Second Order ◽  
Order Kinetic ◽  
First Order ◽  
Kinetic Shift

The homogeneous decomposition reactions of gaseous formic acid

1960 ◽  
Vol 255 (1283) ◽  
pp. 444-455 ◽  
Keyword(s):  
Formic Acid ◽  
Kinetic Parameters ◽  
Rate Constant ◽  
Ion Pairs ◽  
Order Rate Constant ◽  
Second Order ◽  
Unimolecular Decomposition ◽  
Order Component ◽  
First Order ◽  
Homogeneous Decomposition

By use of reaction vessels with specially treated surfaces the homogeneous decomposition of formic acid has been studied kinetically in the range 436 to 532°C. Neither of the two simultaneous reactions ( a ) HCOOH = CO 2 + H 2 , ( b ) HCOOH = CO + H 2 O, is retarded by the usual inhibitors of chain processes. Each appears to be molecular. Reaction ( a ) is of the first order in the range 3 to 650 mm, the first-order rate constant being given by k CO 2 = 10 4⋅8 exp (–30600/ RT )s -1 . It is suggested tentatively that the abnormal kinetic parameters might be explained by regarding the reaction as a decarboxylation of (H + ) (HCOO¯) ion pairs present in minute concentration. Reaction ( b ) shows a pressure dependence most simply explained by a superposition of a predominant second-order component with a small first-order component. The most satisfactory interpretation of the second-order reaction is that it represents the unimolecular decomposition of dimer molecules, known to be present in formic-acid vapour. On this basis the rate constant is given by k CO dimer = 10 13⋅58 exp (–42600/ RT )s -1 , the kinetic parameters thus being in the normal range. The various alternative interpretations are discussed.

scholarly journals The reaction of Pseudomonas aeruginosa cytochrome c oxidase with carbon monoxide

1975 ◽  
Vol 151 (1) ◽  
pp. 51-59 ◽  
Author(s):  
S R Parr ◽  
M T Wilson ◽  
C Greenwood
Keyword(s):  
Cytochrome Oxidase ◽  
Flash Photolysis ◽  
Order Rate Constant ◽  
Second Order ◽  
Stopped Flow ◽  
First Order ◽  
Order Rate ◽  
Co Concentration ◽  
Pseudo First Order ◽  
Two Phases

The binding of CO to ascorbate-reduced Pseudomonas cytochrome oxidase was investigated by static-titration, stopped-flow and flash-photolytic techniques. Static-titration data indicated that the binding process was non-stoicheiometric, with a Hill number of 1.44. Stopped-flow kinetics obtained on the binding of CO to reduced Pseudomonas cytochrome oxidase were biphasic in form; the faster rate exhibited a linear dependence on CO concentration with a second-order rate constant of 2 × 10(4) M-1-s-1, whereas the slower reaction rapidly reached a pseudo-first-order rate limit at approx. 1s-1. The relative proportions of the two phases observed in stopped-flow experiments also showed a dependency on CO concentration, the slower phase increasing as the CO concentration decreased. The kinetics of CO recombination after flash-photolytic dissociation of the reduced Pseudomonas cytochrome oxidase-CO complex were also biphasic in character, both phases showing a linear pseudo-first-order rate dependence on CO concentration. The second-order rate constants were determined as 3.6 × 10(4)M-1-s-1 and 1.6 × 10(4)M-1-s-1 respectively. Again the relative proportions of the two phases varied with CO concentration, the slower phase predominating at low CO concentrations. CO dissociation from the enzyme-CO complex measured in the presence of O2 and NO indicated the presence of two rates, of the order of 0.03s-1 and 0.15s-1. When sodium dithionite was used as a reducing agent for the Pseudomonas cytochrome oxidase, the CO-combination kinetics observed by both stopped flow and flash photolysis were extremely complex and not able to be simply analysed.

On the Interaction Between Human Plasma Kallikrein and C1-Esterase Inhibitor

1983 ◽  
Vol 49 (03) ◽  
pp. 193-195 ◽  
Author(s):  
Torbjörn Nilsson
Keyword(s):  
Dissociation Constant ◽  
Human Plasma ◽  
Rate Constant ◽  
Enzyme Inhibitor ◽  
Order Rate Constant ◽  
Second Order ◽  
Plasma Kallikrein ◽  
First Order ◽  
Order Rate ◽  
Esterase Inhibitor

SummaryThe kinetics of the reaction between human plasma kallikrein and CĪ-esterase inhibitor was studied in a purified system. By monitoring the inhibition reaction for extended periods of time, it was found to proceed in two consecutive steps, a fast reversible second-order binding step followed by a slower, irreversible first-order transition. The rate constants in this reaction model were determined, as well as the dissociation constant of the initial, reversible enzyme-inhibitor complex. Thus, at 37° C the second-order rate constant was found to be 5 · 104 M -1 · s-1, the first order rate constant was 5 · 10-4 s-1 and the dissociation constant K was 1.5 · 10-8 M. Heparin (28 U/ml) and 6-aminohexanoic acid (10 mM) had no effect on the k1 of the of the reaction.

scholarly journals The oxidation of Pseudomonas cytochrome c-551 oxidase by potassium ferricyanide

1978 ◽  
Vol 173 (2) ◽  
pp. 681-690 ◽  
Author(s):  
D Barber ◽  
S R Parr ◽  
C Greenwood
Keyword(s):  
Cytochrome Oxidase ◽  
Rate Constant ◽  
Order Rate Constant ◽  
Potassium Ferricyanide ◽  
Second Order ◽  
Difference Spectra ◽  
Bimolecular Reactions ◽  
Order Rate ◽  
N2 Atmosphere ◽  
Co Dissociation

Stopped-flow kinetics were made of the reaction between ascorbate-reduced Pseudomonas cytochrome oxidase and potassium ferricyanide under both N2 and CO atmospheres. Under N2 three kinetic processes were observed, two being dependent on ferricyanide concentration, with second-order rate constants of 9.6×10(4)M-1.s-1 and 1.5×10(4)M-1.s-1, whereas the other was concentration-independent, with a first-order rate constant of 0.17 +/- 0.03s-1. Measurements of their kinetic difference spectra have allowed the fastest and second-fastest phases of the reaction to be assigned to direct bimolecular reactions of ferricyanide with the haem c and haem d, moieties of the enzyme respectively. Under CO, the second-order rate constant for the reaction of the haem c was, at 1.3×10(5)M-1.s-1, slightly enhanced over the rate in a N2 atmosphere, but the reaction velocity of the haem d1 component was greatly decreased, being apparently limited to that of the rates of CO dissociation from the molecule (0.15s-1 and 0.03s-1). The results are compared with those obtained during a previous study of the reaction of reduced Pseudomonas cytochrome oxidase with oxidized azurin.

The Pulse Radiolysis of Penicillamine and Penicillamine Disulfide in Aqueous Solution

1973 ◽  
Vol 51 (18) ◽  
pp. 3132-3142 ◽  
Author(s):  
John W. Purdie ◽  
Hugh A. Gillis ◽  
Norman V. Klassen
Keyword(s):  
Rate Constant ◽  
Hydrogen Transfer ◽  
Low Dose ◽  
Order Rate Constant ◽  
Second Order ◽  
High Dose ◽  
Ph Effects ◽  
Pseudo First Order Reaction ◽  
First Order ◽  
Dose Rates

Aqueous solutions of penicillamine (RSH) and penicillamine disulfide (RSSR) have been pulse irradiated at several pH's and the ensuing reactions studied. The rate constant for the reaction of solvated electrons with penicillamine disulfide decreases from 7.3 × 10−9 M−1 s−1 at pH 7 to 0.8 × 109 M−1 s−1 at pH 10. The first-order rate constant for the decomposition of the resulting radical anion, RSSR−, increases from 1.77 × 106 s−1 at pH 7 to 6.5 × 106 s−1 at pH 10. Both of these pH effects are attributed to deprotonation of the two amino groups of the disulfide which have microscopic pK values of 7.9 and 8.5. The equilibrium constant for the reaction[Formula: see text]is (2.31 ± 0.2) × 102 M−1 at pH 8 but increases to 3.04 × 102 M−1 at pH 7 and decreases to 0.96 × 102 M−1 at pH 9. Measured from the kinetics of the build-up of RSSR−, k−2 = 1.83 × 106 s−1 at pH 8.Decay of RSSR− in the presence of RSH follows second-order kinetics at high dose rates and first-order kinetics at low dose rates. At high dose rates two second-order reactions[Formula: see text]appear to be involved with rate constants of 1.7 × 109 M−1 s−1 and 6.4 × 109 M−1 s−1 respectively at pH 8, At low dose rates the decay appears to be due to a pseudo first-order reaction between RSSR− and H2O, k ~ 2 × 103 s−1, with valine (RH) and penicillamine trisulfide (RSSR) as principal products. These products are obtained in similar yields by gamma radiolysis of penicillamine solutions. At pH 5, the thiyl radical decays by second-order kinetics, 2k = (2.85 ± 0.15) × 109 M−1 s−1.Studies of solutions containing penicillamine and methanol showed that penicillamine repairs methanol radicals very efficiently by hydrogen transfer. k = (1.1 ± 0.1) × 108M−1 s−1. The implications of the results for chemical radioprotection are discussed.

scholarly journals The pH-dependence of second-order rate constants of enzyme modification may provide free-reactant pKa values

1977 ◽  
Vol 167 (3) ◽  
pp. 859-862 ◽  
Author(s):  
K Brocklehurst ◽  
H B F Dixon
Keyword(s):  
Rate Constant ◽  
Rate Constants ◽  
Ph Dependence ◽  
Order Rate Constant ◽  
Second Order ◽  
Quasi Equilibrium ◽  
Pka Values ◽  
First Order ◽  
Order Rate ◽  
Parallel Reactions

1. Reactions of enzymes with site-specific reagents may involve intermediate adsorptive complexes formed by parallel reactions in several protonic states. Accordingly, a profile of the apparent second-order rate constant for the modification reaction (Kobs., the observed rate constant under conditions where the reagent concentration is low enough for the reaction to be first-order in reagent) against pH can, in general, reflect free-reactant-state molecular pKa values only if a quasi-equilibrium condition exists around the reactive protonic state (EHR) of the adsorptive complex. 2. Usually the condition for quasi-equilibrium is expressed in terms of the rate constants around EHR: (formula: see text) i.e. k mod. less than k-2. This often cannot be assessed directly, particularly if it is not possible to determine kmod. 3. It is shown that kmod. must be much less than k-2, however, if kobs. (the pH-independent value of kobs.) less than k+2. 4. Since probable values of k+2 greater than 10(6)M-1.S-1 and since values of kobs. for many modification reactions less than 10(6)M-1.S-1, the equilibrium assumption should be valid, and kinetic study of such reactions should provide reactant-state pKa values. 5. This may not apply to catalyses, because for them the value of kcat./Km may exceed 5 X 10(5)M-1.S-1. 6. The conditions under which the formation of an intermediate complex by parallel pathways may come to quasi-equilibrium are discussed in the Appendix.

scholarly journals Active-site-serine d-alanyl-d-alanine-cleaving-peptidase-catalysed acyl-transfer reactions. Procedures for studying the penicillin-binding proteins of bacterial plasma membranes

1986 ◽  
Vol 235 (1) ◽  
pp. 159-165 ◽  
Author(s):  
J M Ghuysen ◽  
J M Frère ◽  
M Leyh-Bouille ◽  
M Nguyen-Distèche ◽  
J Coyette
Keyword(s):  
Rate Constant ◽  
Active Site ◽  
Plasma Membranes ◽  
Binding Proteins ◽  
Order Rate Constant ◽  
Second Order ◽  
Beta Lactam ◽  
Penicillin Binding Proteins ◽  
First Order ◽  
Order Rate

Under certain conditions, the values of the parameters that govern the interactions between the active-site-serine D-alanyl-D-alanine-cleaving peptidases and both carbonyl-donor substrates and beta-lactam suicide substrates can be determined on the basis of the amounts of (serine ester-linked) acyl-protein formed during the reactions. Expressing the ‘affinity’ of a beta-lactam compound for a DD-peptidase in terms of second-order rate constant of enzyme acylation and first-order rate constant of acyl-enzyme breakdown rests upon specific features of the interaction (at a given temperature) and permits study of structure-activity relationships, analysis of the mechanism of intrinsic resistance and use of a ‘specificity index’ to define the capacity of a beta-lactam compound of discriminating between various sensitive enzymes. From knowledge of the first-order rate constant of acyl-enzyme breakdown and the given time of incubation, the beta-lactam compound concentrations that are necessary to achieve given extents of DD-peptidase inactivation can be converted into the second-order rate constant of enzyme acylation. The principles thus developed can be applied to the study of the multiple penicillin-binding proteins that occur in the plasma membranes of bacteria.

Development of Sustained Release Multi-Component Microparticulate System of Diclofenac Sodium and Tizanidine Hydrochloride

1970 ◽  
Vol 1 (1) ◽  
pp. 97-105
Author(s):  
Kamlesh Dashora ◽  
Shailendra Saraf ◽  
Swarnalata Saraf
Keyword(s):  
Particle Size ◽  
Sustained Release ◽  
Cellulose Acetate ◽  
Rate Constant ◽  
Diclofenac Sodium ◽  
Order Rate Constant ◽  
Anomalous Transport ◽  
First Order ◽  
Sem Study ◽  
Transport Type

Sustained released tablets of diclofenac sodium (DIC) and tizanidine hydrochloride (TIZ) were prepared by using different proportions of cellulose acetate (CA) as the retardant material. Nine formulations of tablets having different proportion of microparticles developed by varied proportions of polymer: drug ratio ‘’i.e.’’; 1:9 -1:3 for DIC and 1:1 – 3:1 for TIZ. Each tablet contained equivalent to 100 mg of DIC and 6mg of TIZ. The prepared microparticles were white, free flowing and spherical in shape (SEM study), with  the particle size varying from 78.8±1.94 to 103.33±1.28 µm and 175.92± 9.82 to 194.94±14.28µm for DIC  and TIZ, respectively.  The first order rate constant K1 of formulations were found to be in the range of  K1 = 0.117-0.272 and 0.083- 0.189 %hr-1for DIC and TIZ, respectively. The value of exponent coefficient (n) was found to be in the range of 0.6328-0.9412  and 0.8589-1.1954 for DIC and TIZ respectively indicates anomalous  to  non anomalous transport type of diffusions among different formulations

Kinetics of bioactive compounds in functional spice Jiangpo during thermal processing

2012 ◽  
Vol 8 (3) ◽  
Author(s):  
Xiaoyan Dai ◽  
Chenhuan Yu ◽  
Qiaofeng Wu
Keyword(s):  
Kinetic Parameters ◽  
Bioactive Compounds ◽  
Thermal Processing ◽  
Order Rate Constant ◽  
Heat Processing ◽  
Order Kinetic ◽  
Time Intervals ◽  
First Order ◽  
Order Kinetic Model ◽  
Kinetics Of

Abstract Jiangpo is an increasingly popular East Asian spice which is made from Mangnolia officinalis bark and ginger juice. Since it induces bioactive compounds decomposition and has influence on final flavor and fragrance, cooking is regarded as the key operation in preparation of Jiangpo. To evaluate the bioactive compounds content changes of Jiangpo during thermal processing, kinetic parameters including reaction order, rate constant, T1/2 and activation energy of bioactive markers namely honokiol, magnolol and curcumin were determined. Cooking was set at temperatures 60, 90 and 120 °C for selected time intervals. Results displayed the thermal kinetic characteristics of the three compounds. Thermal degradation of Honokiol and magnolol both followed first order kinetic model and the loss of curcumin fitted second order. A mathematical model based on the obtained kinetic parameters has also been developed to predict the degradation of honokiol, magnolol and curcumin in non-isothermal state. All the information in this paper could contribute necessary information for optimizing the existing heat processing of Jiangpo.

scholarly journals The reactivities and ionization properties of the active-site dithiol groups of mammalian protein disulphide-isomerase

1991 ◽  
Vol 275 (2) ◽  
pp. 335-339 ◽  
Author(s):  
H C Hawkins ◽  
R B Freedman
Keyword(s):  
Rate Constant ◽  
Ph Dependence ◽  
Order Rate Constant ◽  
Second Order ◽  
Native Enzyme ◽  
Liver Protein ◽  
Thiol Groups ◽  
Protein Disulphide Isomerase ◽  
Order Rate ◽  
Reactive Groups

1. The number of reactive thiol groups in mammalian liver protein disulphide-isomerase (PDI) in various conditions was investigated by alkylation with iodo[14C]acetate. 2. Both the native enzyme, as isolated, and the urea-denatured enzyme contained negligible reactive thiol groups; the enzyme reduced with dithiothreitol contained two groups reactive towards iodoacetic acid at pH 7.5, and up to five reactive groups were detectable in the reduced denatured enzyme. 3. Modification of the two reactive groups in the reduced native enzyme led to complete inactivation, and the relationship between the loss of activity and the extent of modification was approximately linear. 4. Inactivation of PDI by alkylation of the reduced enzyme followed pseudo-first-order kinetics; a plot of the pH-dependence of the second-order rate constant for inactivation indicated that the essential reactive groups had a pK of 6.7 and a limiting second-order rate constant at high pH of 11 M-1.s-1. 5. Since sequence data on PDI show the presence within the polypeptide of two regions closely similar to thioredoxin, the data strongly indicate that these regions are chemically and functionally equivalent to thioredoxin. 6. The activity of PDI in thiol/disulphide interchange derives from the presence of vicinal dithiol groups in which one thiol group of each pair has an unusually low pK and high nucleophilic reactivity at physiological pH.

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