Elucidation of sequence polymorphism in fuzzless-seed cotton lines

Author(s):  
Marina Naoumkina ◽  
Gregory N. Thyssen ◽  
David D. Fang ◽  
Ping Li ◽  
Christopher B. Florane
2016 ◽  
Vol 42 (1) ◽  
pp. 11 ◽  
Author(s):  
Ai-Qin YUE ◽  
Ang LI ◽  
Xin-Guo MAO ◽  
Xiao-Ping CHANG ◽  
Yu-Ping LIU ◽  
...  

Genetics ◽  
1998 ◽  
Vol 150 (4) ◽  
pp. 1585-1593 ◽  
Author(s):  
Wolfgang Stephan ◽  
Charles H Langley

Abstract Surveys in Drosophila have consistently found reduced levels of DNA sequence polymorphism in genomic regions experiencing low crossing-over per physical length, while these same regions exhibit normal amounts of interspecific divergence. Here we show that for 36 loci across the genomes of eight Lycopersicon species, naturally occurring DNA polymorphism (scaled by locus-specific divergence between species) is positively correlated with the density of crossing-over per physical length. Large between-species differences in the amount of DNA sequence polymorphism reflect breeding systems: selfing species show much less within-species polymorphism than outcrossing species. The strongest association of expected heterozygosity with crossing-over is found in species with intermediate levels of average nucleotide diversity. All of these observations appear to be in qualitative agreement with the hitchhiking effects caused by the fixation of advantageous mutations and/or “background selection” against deleterious mutations.


2017 ◽  
Vol 13 (5) ◽  
pp. 20170153 ◽  
Author(s):  
Mai Miyata ◽  
Tatsuro Konagaya ◽  
Kenji Yukuhiro ◽  
Masashi Nomura ◽  
Daisuke Kageyama

Maternally inherited Wolbachia endosymbionts manipulate arthropod reproduction in various ways. In the butterfly Eurema mandarina , a cytoplasmic incompatibility-inducing Wolbachia strain w CI and the associated mtDNA haplotypes are known to originate from the sister species Eurema hecabe , which offered a good case study for microbe-mediated hybrid introgression. Besides w CI, some females with the Z0 karyotype harbour a distinct Wolbachia strain w Fem, which causes all-female production by meiotic drive and feminization. We report that a considerable proportion of E. mandarina females (65.7%) were infected with both w CI and w Fem (CF) on Tanegashima Island. While females singly infected with w CI (C) produced offspring at a 1 : 1 sex ratio, CF females produced only females. Although Z-linked sequence polymorphism showed no signs of divergence between C and CF females, mtDNA split into two discrete clades; one consisted of C females and the other CF females, both of which formed a clade with E. hecabe but not with uninfected E. mandarina . This suggests that CF matrilines also, but independently, experienced a selective sweep after hybrid introgression from E. hecabe . Distinct evolutionary forces were suggested to have caused C and CF matrilines to diverge, which would be irreversible because of the particular phenotype of w Fem.


1971 ◽  
Vol 17 (4) ◽  
pp. 484-485
Author(s):  
P. V. M. Richards ◽  
P. E. L. Thomas
Keyword(s):  

2010 ◽  
Vol 42 (3) ◽  
pp. 339-346 ◽  
Author(s):  
Andreas ENGELEN ◽  
Peter CONVEY ◽  
Sieglinde OTT

AbstractCoal Nunatak is an ice-free inland nunatak located on southern Alexander Island, adjacent to the west coast of the Antarctic Peninsula. Situated close to the Antarctic continent, it is characterized by harsh environmental conditions. Macroscopic colonization is restricted to micro-niches offering suitable conditions for a small number of lichens and mosses. The extreme environmental conditions place particular pressures on colonizers. Lepraria borealis is the dominant crustose lichen species present on Coal Nunatak, and shows distinctive features in its life history strategy, in particular expressing unusually low selectivity of the mycobiont towards potential photobionts. To assess selectivity, we measured algal DNA sequence polymorphism in a region of 480–660 bp of the nuclear internal transcribed spacer region of ribosomal DNA. We identified three different photobiont species, belonging to two different genera. We interpret this strategy as being advantageous in facilitating the colonization and community dominance of L. borealis under the isolation and extreme environmental conditions of Coal Nunatak.


2017 ◽  
Vol 32 (1) ◽  
pp. 60-65 ◽  
Author(s):  
Matheus G. Palhano ◽  
Jason K. Norsworthy ◽  
Tom Barber

AbstractWith the recent confirmation of protoporphyrinogen oxidase (PPO)-resistant Palmer amaranth in the US South, concern is increasing about the sustainability of weed management in cotton production systems. Cover crops can help to alleviate this problem, as they can suppress weed emergence via allelochemicals and/or a physical residue barrier. Field experiments were conducted in 2014 and 2015 at the Arkansas Agricultural Research and Extension Center to evaluate various cover crops for suppressing weed emergence and protecting cotton yield. In both years, cereal rye and wheat had the highest biomass production, whereas the amount of biomass present in spring did not differ among the remaining cover crops. All cover crops initially diminished Palmer amaranth emergence. However, cereal rye provided the greatest suppression, with 83% less emergence than in no cover crop plots. Physical suppression of Palmer amaranth and other weeds with cereal residues is probably the greatest contributor to reducing weed emergence. Seed cotton yield in the legume and rapeseed cover crop plots were similar when compared with the no cover crop treatment. The seed cotton yield collected from cereal cover crop plots was lower than from other treatments due to decreased cotton stand.


1993 ◽  
Vol 2 (10) ◽  
pp. 1750-1750 ◽  
Author(s):  
A. Braun ◽  
A. Kofler ◽  
R. Bichlmaier ◽  
S. Kammerer ◽  
H. Cleve

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