scholarly journals Stable polymer bilayers for protein channel recordings at high guanidinium chloride concentrations

Author(s):  
Luning Yu ◽  
Xinqi Kang ◽  
Mohammad Amin Alibakhshi ◽  
Mikhail Pavlenok ◽  
Michael Niederweis ◽  
...  
2020 ◽  
Author(s):  
Luning Yu ◽  
Xinqi Kang ◽  
Mohammad Amin Alibakhshi ◽  
Mikhail Pavlenok ◽  
Michael Niederweis ◽  
...  

AbstractUse of chaotropic reagents is common in biophysical characterization of biomolecules. When the study involves transmembrane protein channels, the stability of the protein channel and supporting bilayer membrane must be considered. In this letter we show that planar bilayers composed of poly(1,2-butadiene)-b-poly(ethylene oxide) diblock copolymer are stable and leak-free at high guanidinium chloride concentrations, in contrast to diphytanoyl phosphatidylcholine bilayers which exhibit deleterious leakage under similar conditions. Further, insertion and functional analysis of channels such as α-hemolysin and MspA are straightforward in these polymer membranes. Finally, we demonstrate that α-hemolysin channels maintain their structural integrity at 2M guanidinium chloride concentrations using blunt DNA hairpins as molecular reporters.


1983 ◽  
Vol 215 (3) ◽  
pp. 525-529 ◽  
Author(s):  
R M Thomas ◽  
J Feeney ◽  
R B Nicholson ◽  
R H Pain ◽  
G C K Roberts

The unfolding of beta-lactamase (penicillinase) from Staphylococcus aureus by guanidinium chloride was followed by using n.m.r. spectroscopy. On the basis of the observation of resonances corresponding to histidine, tyrosine and other amino acid side chains, the existence of a stable partially folded species was demonstrated. These experiments provide detailed characterization of the intermediate that confirms and extends previous characterization by absorption and c.d. spectroscopy and by flow properties. In addition, they show that residues in the N-terminal third of the molecule are affected by the native-to-intermediate transition. Persistent non-equivalence of the two imidazole C2 proton resonances at high guanidinium chloride concentrations is discussed in terms of local sequence effects on the chemical shift.


1984 ◽  
Vol 217 (1) ◽  
pp. 327-330 ◽  
Author(s):  
E T Bell ◽  
J E Bell

Previous workers have shown that the hexamers of glutamate dehydrogenase are dissociated first into trimers and subsequently into monomers by increasing guanidinium chloride concentrations. In renaturation experiments it is shown that trimers of glutamate dehydrogenase can be reassociated to give the hexamer form of the enzyme, with full regain of activity. Monomeric subunits produced at high guanidinium chloride concentrations cannot be renatured. The trimer form of the enzyme is shown to have no catalytic activity, although the hexamer form in guanidinium chloride has full activity.


1968 ◽  
Vol 110 (1) ◽  
pp. 59-66 ◽  
Author(s):  
N. M. Green ◽  
M. E. Ross

1. Each molecule of biotin bound to avidin protected four tryptophan residues from oxidation by N-bromosuccinimide, regardless of the occupancy of neighbouring binding sites in the four-sub-unit avidin molecule. 2. The oxidation products from avidin molecules in which some of the sites were occupied were separated on columns of Sephadex G-100. In the absence of biotin, oxidized avidin broke down into sub-units, which partly aggregated. When some of the sites were occupied by biotin, the only detectable products were completely oxidized avidin (sub-units and large aggregates) and unoxidized avidin–biotin complex (tetramer). Since the biotin-containing sub-units were randomly distributed before oxidation took place, they must have dissociated from the molecules containing oxidized sub-units and then reassociated to form the tetrameric avidin–biotin complex. 3. This reassociation still occurred in 3·5m-guanidinium chloride, which prevents the reassociation of unoccupied sub-units. During their brief existence in this medium, the sub-units of avidin–biotin complex were protected from oxidation by N-bromo-succinimide to the same extent as was the tetrameric complex. 4. It is concluded that sub-units of avidin–biotin complex do not readily lose their biotin, even in 3·5m-guanidinium chloride, and that monomeric biotin–binding species are probably present in solutions of avidin sub-units at guanidinium chloride concentrations between 3·0m and 3·5m.


2010 ◽  
Vol 45 (4) ◽  
pp. 451-461 ◽  
Author(s):  
Nandana Perera ◽  
Bahram Gharabaghi ◽  
Peter Noehammer ◽  
Bruce Kilgour

Abstract Occurrence of increasing chloride concentrations in urban streams of cold climates, mainly due to road salt application, has raised concerns on its adverse effects on aquatic and terrestrial ecosystems. Therefore, there is a need for a better understanding of processes associated with road salt application and subsequent discharge into the environment in order to develop management practices to minimize detrimental effects of chlorides. The chloride mass analysis for the Highland Creek watershed based on four years of hourly monitoring data indicates that approximately 60% of the chlorides applied on the watershed enter streams prior to subsequent salting period, 85% of which occurs during the period between November and March. Contribution of private de-icing operations on chloride mass input within Highland Creek watershed was estimated to be approximately 38%, indicating its significance in overall chloride mass balance. Salt application rates, as well as chloride output in the streams, vary spatially based on land use, influencing chloride concentrations in surface waters. The estimated groundwater chloride concentration of 275 mg/L indicates that some aquatic organisms in Highland Creek would potentially be at risk even outside the winter period under dry weather flow conditions.


1977 ◽  
Vol 12 (1) ◽  
pp. 233-255
Author(s):  
J.F. Sykes ◽  
A.J. Crutcher

Abstract A two-dimensional Galerkin finite element model for flow and contaminant transport in variably saturated porous media is used to analyze the transport of chlorides from a sanitary landfill located in Southern Ontario. A representative cross-section is selected for the analysis. Predicted chloride concentrations are presented for the cross section at various horizon years.


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