Long non-coding RNA profile in banana shrimp, Fenneropenaeus merguiensis and the potential role of lncPV13 in vitellogenesis

2021 ◽  
pp. 111045
Author(s):  
Timpika Thepsuwan ◽  
Wanilada Rungrassamee ◽  
Unitsa Sangket ◽  
Sukhuman Whankaew ◽  
Ponsit Sathapondecha
Keyword(s):  
Potential Role ◽  
Non Coding Rna ◽  
Fenneropenaeus Merguiensis ◽  
Long Non Coding Rna

scholarly journals Integrated analysis of lncRNA–mRNA networks associated with an SLA titanium surface reveals the potential role of HIF1A-AS1 in bone remodeling

RSC Advances ◽  
2020 ◽  
Vol 10 (35) ◽  
pp. 20972-20990
Author(s):  
Yan Zheng ◽  
Yunfei Zheng ◽  
Lingfei Jia ◽  
Yu Zhang ◽  
Ye Lin
Keyword(s):  
Osteogenic Differentiation ◽  
Bone Remodeling ◽  
P38 Mapk ◽  
Titanium Surface ◽  
Potential Role ◽  
Integrated Analysis ◽  
Non Coding Rna ◽  
Long Non Coding Rna

Long non-coding RNA HIF1A-AS1 plays a role in SLA titanium surface-induced osteogenic differentiation of hBMSCs by regulating p38 MAPK.

scholarly journals Long Non-Coding RNA PVT1 and Its Target miRNA-146a as Potential Prognostic Biomarkers in Rheumatoid Arthritis Patients

Life ◽  
2021 ◽  
Vol 11 (12) ◽  
pp. 1382
Author(s):  
Randa Erfan ◽  
Olfat G. Shaker ◽  
Mahmoud A. F. Khalil ◽  
Yumn A. Elsabagh ◽  
Azza M. Ahmed ◽  
...  
Keyword(s):  
Rheumatoid Arthritis ◽  
Knee Injury ◽  
Potential Role ◽  
Fold Change ◽  
Healthy Individuals ◽  
Expression Levels ◽  
Non Coding Rna ◽  
Non Coding Rnas ◽  
Long Non Coding Rna

Objective: Long non-coding RNAs (lncRNAs) and their target microRNAs were documented in multiple studies to have a significant role in different joint disorders such as rheumatoid arthritis (RA) and osteoarthritis (OA). The current work aimed to determine the potential role of lnc-PVT1 and miR-146a as promising biomarkers to distinguish between RA, OA patients, and healthy individuals. Methods: The expression levels of lnc-PVT1 and its target miR-146a in the serum were measured for three different groups, including patients with RA (40), OA patients (40), and healthy controls (HCs) (40). Participating individuals were subjected to a full history investigation and clinical examination. Blood samples were tested for ESR, RF, CBC, as well as liver and renal functions. Serum was used to detect the relative expression levels of lnc-PVT1 and miR-146a and we correlated the levels with RA and OA activity and severity signs. Results: Lnc-PVT1 expression level was greater among patients with RA compared to that of OA patients, with a fold change median of 2.62 and 0.22, respectively (p = 0.001). The miR-146a fold change was significantly demonstrated between the RA, OA, and HCs groups. There was no correlation between both biomarkers with the disease activity scales (DAS28) of RA, the Knee injury Osteoarthritis Outcome Score (KOOS), or any sign of detection of the disease severity of OA. Conclusions: lnc-PVT1 and miR-146a could be considered as promising biomarkers for the diagnosis of RA and OA and may have an important role as therapeutic targets in the future.

scholarly journals SNHG7 has an oncogenic role in colorectal cancer via potential sponging of MIR-485-5P and MIR-193A-5P; in silico approach

Genetika ◽  
2021 ◽  
Vol 53 (1) ◽  
pp. 65-78
Author(s):  
Farinaz Ziaee ◽  
Mohammadreza Hajjari ◽  
Seyed Kazeminezhad ◽  
Mehrdad Behmanesh
Keyword(s):  
Colorectal Cancer ◽  
Cancer Progression ◽  
In Silico ◽  
Potential Role ◽  
Non Coding Rna ◽  
In Silico Study ◽  
Competing Endogenous Rnas ◽  
Long Non Coding Rna ◽  
In Silico Analyses

SNHG7, as a member of the small nucleolar host gene family, is a recently identified long non-coding RNA (lncRNA). Different reports have identified the SNHGs as competing endogenous RNAs (ceRNAs) sponging miRNAs with a role in cancer progression. However, the biological functions of SNHG7 in the colorectal cancer (CRC) remained to be almost unknown. The current in silico study was aimed to find the potential role of SNHG7 in the CRC development. In this study, we showed the up-regulation of SNHG7 as well as its potential correlation with miRNAs, including mir-193a-5p and mir-485-5P. We hypothesized that SNHG7 modulates these miRNAs availability by acting as a molecular sponge. Our findings showed the potential targets of these miRNAs by studying different databases as well as in silico analyses. In summary, we found SNHG7 as a potential ceRNA which may be a promising biomarker for diagnostic and therapeutic target in CRC.

scholarly journals Emerging Role of Exosomal Long Non-coding RNAs in Spaceflight-Associated Risks in Astronauts

2022 ◽  
Vol 12 ◽  
Author(s):  
Malik Bisserier ◽  
Nathaniel Saffran ◽  
Agnieszka Brojakowska ◽  
Aimy Sebastian ◽  
Angela Clare Evans ◽  
...  
Keyword(s):  
Rna Splicing ◽  
Potential Role ◽  
Space Environment ◽  
Non Coding Rna ◽  
Peripheral Blood Plasma ◽  
Non Coding Rnas ◽  
Associated Risk Factors ◽  
And Function ◽  
Long Non Coding Rna

During spaceflight, astronauts are exposed to multiple unique environmental factors, particularly microgravity and ionizing radiation, that can cause a range of harmful health consequences. Over the past decades, increasing evidence demonstrates that the space environment can induce changes in gene expression and RNA processing. Long non-coding RNA (lncRNA) represent an emerging area of focus in molecular biology as they modulate chromatin structure and function, the transcription of neighboring genes, and affect RNA splicing, stability, and translation. They have been implicated in cancer development and associated with diverse cardiovascular conditions and associated risk factors. However, their role on astronauts’ health after spaceflight remains poorly understood. In this perspective article, we provide new insights into the potential role of exosomal lncRNA after spaceflight. We analyzed the transcriptional profile of exosomes isolated from peripheral blood plasma of three astronauts who flew on various Shuttle missions between 1998–2001 by RNA-sequencing. Computational analysis of the transcriptome of these exosomes identified 27 differentially expressed lncRNAs with a Log2 fold change, with molecular, cellular, and clinical implications.

scholarly journals Ultraconserved Long Non-Coding RNA Uc.112 is Abnormally Expressed in Childhood Acute Lymphoblastic Leukemia Subtypes

2018 ◽  
Author(s):  
Pablo Chagas ◽  
Graziella Sousa ◽  
Marcio Kodama ◽  
Carlos Biagi Junior ◽  
José Yunes Andres ◽  
...  
Keyword(s):  
Acute Lymphoblastic Leukemia ◽  
Potential Role ◽  
Lymphoblastic Leukemia ◽  
Childhood Acute Lymphoblastic Leukemia ◽  
Aberrant Expression ◽  
Non Coding Rna ◽  
Pediatric All ◽  
Long Non Coding Rna

Long non-coding RNA (lncRNA) aberrant expression have been found in several types of cancer, including acute lymphoblastic leukemia (ALL), but lncRNA mapped in transcribed ultraconserved regions (T-UCRs) are little explored. The T-UCRs uc.112, uc.122, uc.160 and uc.262 were evaluated in pediatric ALL and uc.112 expression was higher in T-ALL compared to patients with B-ALL and in patients with hyperdiploid karyotype. These findings suggest a potential role of this uc.112 in pediatric ALL and emphasize the need for further investigation of T-UCR in pediatric ALL.

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