The complete description of larval stages of the lobster shrimpLeonardsaxius amurensis(Kobjakova, 1937) (Decapoda: Axiidea: Axiidae) identified by DNA barcoding

2017 ◽  
Vol 98 (6) ◽  
pp. 1435-1453 ◽  
Author(s):  
Elena S. Kornienko ◽  
Darya D. Golubinskaya ◽  
Olga M. Korn ◽  
Svetlana N. Sharina
Keyword(s):  
Larval Development ◽  
Sequence Data ◽  
Molecular Genetic ◽  
Sympatric Species ◽  
Molecular Genetic Analysis ◽  
Mitochondrial Coi ◽  
Larval Stages ◽  
The Family ◽  
Rdna Sequence Data ◽  
First Time

The complete larval development of the lobster shrimpLeonardsaxius amurensis(Kobjakova, 1937) (Decapoda: Axiidea: Axiidae) is described and illustrated for the first time. The first zoeae of this species were collected from the plankton samples and reared in the laboratory before moulting to the megalopa. A molecular genetic analysis based on comparison of partial mitochondrial COI, 12S rDNA and 16S rDNA sequence data confirmed the identity of axiid larvae found in the plankton andL. amurensisadults collected in the same area. The larval development ofL. amurensisincludes five zoeal stages and a single megalopa. Zoeae I ofL. amurensisare characterized by the presence of one short posterodorsal spine on the fifth pleonite in contrast to the larvae of related sympatric speciesBoasaxius princepshaving four posterodorsal spines on the pleonites 2–5.Leonardsaxius amurensisoccupies an intermediate position between lobster shrimps with abbreviated pelagic development (2–3 zoeal stages) and species with long development (up to eight zoeal stages). Thus, the number of zoeal stages in the family Axiidae varies widely, similarly to that in the families Callianassidae and Upogebiidae.

Molecular insights into the taxonomic status of Coris atlantica (Pisces: Labridae)

2000 ◽  
Vol 80 (5) ◽  
pp. 929-933 ◽  
Author(s):  
Thomas Guillemaud ◽  
Maria L. Cancela ◽  
Pedro Afonso ◽  
Telmo Morato ◽  
Ricardo S. Santos ◽  
...  
Keyword(s):  
Maximum Likelihood ◽  
Phylogenetic Trees ◽  
Sequence Data ◽  
Molecular Genetic ◽  
Taxonomic Status ◽  
Molecular Genetic Analysis ◽  
Maximum Likelihood Analysis ◽  
Rdna Sequence Data ◽  
Likelihood Analysis ◽  
Mitochondrial Rdna

A molecular genetic analysis of Coris julis from different sites in the Mediterranean and the Atlantic and C. atlantica from the Cabo Verde Islands was applied to infer phylogenetic relationships between the taxa. More precisely, partial 12S mitochondrial rDNA sequence data were used in maximum parsimony, neighbour-joining, and maximum likelihood analysis to generate phylogenetic trees. The polymorphism observed indicated an important differentiation between the C. atlantica and C. julis specimens and supported the existence of two different species.

Morphology of the larval stages of the spider crab Herbstia condyliata (Fabricius, 1787) (Brachyura: Majoidea: Pisidae) obtained in laboratory conditions

Zootaxa ◽  
2008 ◽  
Vol 1726 (1) ◽  
pp. 1 ◽  
Author(s):  
GUILLERMO GUERAO ◽  
PERE ABELLÓ ◽  
CORAL HISPANO
Keyword(s):  
Larval Development ◽  
Laboratory Culture ◽  
Western Mediterranean ◽  
Spider Crab ◽  
Basal Segment ◽  
Larval Stages ◽  
Laboratory Conditions ◽  
The Family ◽  
First Time

The complete larval development of the majoid crab Herbstia condyliata (Fabricius, 1787) from the western Mediterranean was obtained from laboratory culture. All larval stages (two zoeal stages and the megalopa) are described and illustrated in detail for the first time. The morphology of the zoeae and megalopa is compared with the corresponding stages of other known species of the family Pisidae. The zoeal stages of H. condyliata present a pleon with unusual characters within the Pisidae such as the presence of dorsolateral processes in pleomere 3, two dorsal setae in pleomeres 2–4 (second zoea) and the very long posterolateral processes in pleomeres 3–4. The megalopa can be differentiated from other Pisidae species by the presence of a very developed cardiac tubercle on the carapace and the absence of plumose setae on the basal segment of the first maxilliped exopod.

scholarly journals A Novel Mutation of ATP7B Gene in a Case of Wilson Disease

Medicina ◽  
2021 ◽  
Vol 57 (2) ◽  
pp. 123
Author(s):  
Cigdem Yuce Kahraman ◽  
Ali Islek ◽  
Abdulgani Tatar ◽  
Özlem Özdemir ◽  
Adil Mardinglu ◽  
...  
Keyword(s):  
Wilson Disease ◽  
Novel Mutation ◽  
Molecular Genetic ◽  
Molecular Genetic Analysis ◽  
Compound Heterozygous ◽  
Atp7b Gene ◽  
Loss Of Function ◽  
Clinical Presentations ◽  
The Family ◽  
The Brain

Wilson disease (WD) (OMIM# 277900) is an autosomal recessive inherited disorder characterized by excess copper (Cu) storage in different human tissues, such as the brain, liver, and the corneas of the eyes. It is a rare disorder that occurs in approximately 1 in 30,000 individuals. The clinical presentations of WD are highly varied, primarily consisting of hepatic and neurological conditions. WD is caused by homozygous or compound heterozygous mutations in the ATP7B gene. The diagnosis of the disease is complicated because of its heterogeneous phenotypes. The molecular genetic analysis encourages early diagnosis, treatment, and the opportunity to screen individuals at risk in the family. In this paper, we reported a case with a novel, hotspot-located mutation in WD. We have suggested that this mutation in the ATP7B gene might contribute to liver findings, progressing to liver failure with a loss of function effect. Besides this, if patients have liver symptoms in childhood and/or are children of consanguineous parents, WD should be considered during the evaluation of the patients.

scholarly journals Redescription, Morphogenesis, and Molecular Phylogeny of Pseudosincirra longicirrata nov. comb., With Establishment of a New Genus Pseudosincirra nov. gen. (Ciliophora, Hypotrichia)

2021 ◽  
Vol 12 ◽  
Author(s):  
Qi Gao ◽  
Chen Shao ◽  
Qiuyue Tang ◽  
Jingbao Li
Keyword(s):  
Molecular Phylogeny ◽  
New Genus ◽  
Sequence Data ◽  
Southern China ◽  
Phylogenetic Analyses ◽  
Small Subunit ◽  
Ssu Rdna ◽  
Original Population ◽  
The Family ◽  
Rdna Sequence Data

The morphology and morphogenesis of Pseudosincirra longicirrata nov. gen. and nov. comb., isolated from southern China, were investigated with living observation and protargol staining. Our population is similar to the original population in living characteristics and ciliary patterns. The main determinable morphogenetic features of P. longicirrata nov. comb. are the presence of five frontoventral-transverse cirral anlagen (FVT-anlagen) and a dorsomarginal kinety anlage. According to the origin of FVT-anlagen IV and V in proter, it can be determined that P. longicirrata nov. comb. possesses two frontoventral rows and one right marginal row. Hence, a new genus, Pseudosincirra nov. gen., is proposed, and the diagnosis of P. longicirrata nov. comb. is improved. The new genus is diagnosed as follows: adoral zone of membranelles and undulating membranes is in a Gonostomum pattern; there are three enlarged frontal cirri, one buccal cirrus, and one parabuccal cirrus; postperistomial cirrus and transverse cirri are lacking; there are two more or less long frontoventral rows and one right and two or more left marginal rows; cirri within all rows very widely spaced; dorsal kinety pattern is of Urosomoida type, that is, three dorsal kineties and one dorsomarginal kinety; and caudal cirri are present. Phylogenetic analyses based on the small subunit ribosomal (SSU rDNA) sequence data indicate that P. longicirrata nov. comb. clusters with Deviata and Perisincirra. It is considered that Pseudosincirra nov. gen. and Perisincirra paucicirrata should be assigned to the family Deviatidae; fine cirri, and cirri within all rows being relatively widely spaced, should be considered as plesiomorphies of Deviatidae; and Deviatidae is closely related to Dorsomarginalia or Strongylidium–Hemiamphisiella–Pseudouroleptus.

scholarly journals Amazing Discoveries of Benthic Fauna from the Abyssal Zone of Lake Baikal

Biology ◽  
2021 ◽  
Vol 10 (10) ◽  
pp. 972
Author(s):  
Ilya Kondratov ◽  
Tatiana Sitnikova ◽  
Irina Kaygorodova ◽  
Natalia Denikina ◽  
Vadim Annenkov ◽  
...  
Keyword(s):  
Lake Baikal ◽  
Molecular Genetic ◽  
Benthic Fauna ◽  
Molecular Genetic Analysis ◽  
Artificial Substrates ◽  
Plastic Substrate ◽  
Freshwater Ecosystem ◽  
Abyssal Zone ◽  
First Time ◽  
Natural Laboratory

Lake Baikal is a natural laboratory for the study of species diversity and evolution, as a unique freshwater ecosystem meeting the all of the main criteria of the World Heritage Convention. However, despite many years of research, the true biodiversity of the lake is clearly insufficiently studied, especially that of deep-water benthic sessile organisms. For the first time, plastic waste was raised from depths of 110 to 190 m of Lake Baikal. The aim of this study was to examine the biological community inhabiting the plastic substrate using morphological and molecular genetic analysis. Fragments of plastic packaging materials were densely populated: bryozoans, leeches and their cocoons, capsules of gastropod eggs, and turbellaria cocoons were found. All the data obtained as a result of an analysis of the nucleotide sequences of the standard bar-coding fragment of the mitochondrial genome turned out to be unique. Our results demonstrate the prospects for conducting comprehensive studies of artificial substrates to determine the true biodiversity of benthos in the abyssal zone of Lake Baikal.

Larval development of Petrolisthes tuberculatus (Guérin, 1835) (Decapoda, Anomura, Porcellanidae) reared in laboratory

Zootaxa ◽  
2019 ◽  
Vol 4623 (2) ◽  
pp. 364-380
Author(s):  
MARIA EUGENIA GONZALEZ-CANALES ◽  
JOSE A. CUESTA ◽  
JUAN IGNACIO GONZÁLEZ-GORDILLO
Keyword(s):  
Larval Development ◽  
The Other ◽  
Larval Stages ◽  
First Time

The complete larval development of Petrolisthes tuberculatus (including two zoeal stages and the megalopa) is described and illustrated in detail for the first time, based on laboratory-reared material. In order to allow the differentiation of specimens from plankton samples, the larval stages of P. tuberculatus are compared with those known for other porcellanid crabs from Chilean waters (Allopetrolisthes angulosus, Petrolisthes granulosus, P. laevigatus and P. violaceus). As expected, this comparison lead to the inclusion of P. tuberculatus within the “sección Porcellanina” together with the other Chilean species of porcellanids. 

Morphological and molecular identification of some species of nematode of the family Protostrongylidae Leiper, 1926

2016 ◽  
Vol 3 (4) ◽  
pp. 454-461
Author(s):  
Салахутдинов ◽  
I. Salakhutdinov ◽  
Рузиев ◽  
B. Ruziev ◽  
Каримова ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Phylogenetic Trees ◽  
Molecular Genetic ◽  
Digital Camera ◽  
Molecular Genetic Analysis ◽  
Nucleotide Sequences ◽  
Genetic Identification ◽  
Mountain Area ◽  
Phylogenetic Relations ◽  
The Family

Objective of research: conducting morphological and molecular-genetic identification and studying phylogenetic relations between protostrongylids. Materials and methods: helminthological material was collected from wild (Capra sibirica, C. falconeri, Ovis vignei and O. ammon) and domestic hollow horned ruminants (C. hircus and O. aries), and land mollusks of the family Xeropicta in the piedmont and mountain area of Uzbekisan. The morphology of protostrongylids was studied using the methods of Boev (1975) and Anderson (1978). To identify the nematode type we used temporary preparations treated with glycerol. The first-stage larvae were investigated by examination of fecal samples from animals taking into account the length, tail form and body size. To study the morphology of the third-stage protostrongylid larvae the feet of infected mollusks Xeropicta candaсharica were separated and placed into the artificial gastric juice where the cap was destroyed and the infected larvae were eliminated. After determination of species belonging of mature and larval nematodes the material was stored in separate test-tubes with distilled water under the low temperature (- 20 ºС) or in 70 % Ethanol for the molecular analysis. We used microscopes ML 2000 with a digital camera and Olympus CX3. DNA extraction, amplification and sequencing were performed with an automated sequencer. Phylogenetic analysis was conducted using the software Clustal X 2.0. Phylogenetic trees were created by the Neighbor–Joining method. Nucleotide sequences ITS-2 regions of species Protostrongylus rufescens (EU018485), P. shiozawai (AB478249), Ortostrongylus macrotis (EU018483), Cystocaulus ocreatus (EU018481) and Umingmakstrongylus pallikuukensis (AY648409) received from the NCBI GenBank were used in phylogenetic analysis. Results and discussion: Four species of adult protostrongylid nematodes: Protostrongylus rufescens, P. hobmaieri, Spiculocaulus leuckarti and Cystocaulus ocreatus were determined. DNA from four species of mature protostrongylids and larvae was amplified by using ITS-2 regions. Amplificate dimension of nematodes P. rufescens and P. hobmaieri was 380 base pairs (b.p.), S. leuckarti – 388, C. ocreatus – 399 b.p. According to the results of phylogenetic analysis and comparison of nucleotide sequences, five protostrongylid species were found in animals of the Caprinae subfamily: P. rufescens, P. hobmaieri, Protostrongylus sp., S. leuckarti and C. ocreatus. The morphological and molecular-genetic analysis of detected nematodes enables the precise identification.

Generic delimitations in the family Stictidaceae (Ostropales, Ascomycota): the Stictis–Conotrema problem

2005 ◽  
Vol 37 (1) ◽  
pp. 67-75 ◽  
Author(s):  
Mats WEDIN ◽  
Heidi DÖRING ◽  
Kristina KÖNBERG ◽  
Gunnar GILENSTAM
Keyword(s):  
Sequence Data ◽  
Sister Group ◽  
Lsu Rdna ◽  
Infrageneric Classification ◽  
Rdna Its ◽  
The Family ◽  
Rdna Sequence Data ◽  
Natural Groups ◽  
High Support

The family Stictidaceae (Ostropales, Ascomycota) contains both lichenized and non-lichenized fungi. Here, we test if Conotrema (lichenized) and Stictis (non-lichenized) as currently delimited are distinct monophyletic genera, by parsimony and parsimony jackknifing analyses of combined nuclear rDNA (ITS and partial LSU rDNA) and mitochondrial SSU rDNA sequence data matrices. The study includes four species of Stictis, three species of Conotrema, and representatives of the related Schizoxylon (lichenized), Odontotrema, Carestiella (at least sometimes associated with algae), Cryptodiscus and Thelotrema (lichenized). In all analyses, the Conotrema species were nested within Stictis with high support. Thus, we conclude that Conotrema are only lichenized representatives of Stictis. The type species of the two generic names, C. urceolatum and S. radiata, are sister taxa in our analyses. Furthermore, the analysis gave no support for the present infrageneric classification of Stictis. Carestiella socia (the type of Carestiella) and the two representatives of Schizoxylon studied were also nested within Stictis s. lat. The Odontotremataceae is the sister group to the Stictidaceae, and Cryptodiscus foveolaris groups with Thelotrema rather than with the Stictidaceae. We conclude that lichenization in the Stictidaceae does not characterize natural groups, and that Conotrema should be considered a synonym to Stictis, as predicted by anatomical characteristics. The new combinations Stictis urceolatum and Stictis populorum are made.

Phylogeny of the Parmeliaceae–DNA Data Versus Morphological Data

1998 ◽  
Vol 30 (4-5) ◽  
pp. 463-472 ◽  
Author(s):  
Jan-Eric Mattsson ◽  
Mats Wedin
Keyword(s):  
Sequence Data ◽  
Phylogenetic Analyses ◽  
Morphological Data ◽  
Slight Variation ◽  
Hypogymnia Physodes ◽  
Nuclear Rdna ◽  
Future Studies ◽  
The Family ◽  
Rdna Sequence Data ◽  
Close Relationship

AbstractIn order to identify monophyletic groups within the family Parmeliaceae, eleven taxa (Bryoria capillaris, Cetraria islandica, Evernia pruniastri, Hypogymnia physodes, Parmelia saxatilis, Platismatia glauca, Pleurosticta acetabulum, Usneaflorida, Vulpicida juniperina, V. pinastri, and Xanthoparmelia conspersa) were studied using newly produced nuclear rDNA sequence data from the ITS and 5·8S regions. The resulting evolutionary hypothesis was compared with results from previous phylogenetic analyses based on anatomy, morphology, and chemistry. The outcome of this comparison does not support the earlier proposed phylogenies but is not stable enough for identifying monophyletic groups, with one exception. The results indicate a close relationship between Cetraria and Vulpicida, which is contradictory to previous published analyses. The variation in ascus structures in the Parmeliaceae is discussed and it is questioned whether the earlier distinguished ‘ forms ’ of ascus types represent synapomorphies, if they are based on poorly supported analyses, or if they are exaggerations of relatively slight variation in shape. Further interpretations of the results are discussed and areas of future studies based on DNA-data are suggested.

Morphological descriptions of the larval and first juvenile stages of the decorator crab Camposcia retusa (Latreille, 1829) from laboratory-reared material

Zootaxa ◽  
2019 ◽  
Vol 4577 (2) ◽  
pp. 295
Author(s):  
TIAN XU ◽  
CHAOSHU ZENG ◽  
KATE S. HUTSON
Keyword(s):  
Coral Reefs ◽  
Larval Development ◽  
Red Sea ◽  
Larval Stage ◽  
Morphological Characters ◽  
Larval Stages ◽  
Juvenile Stages ◽  
Decorator Crab ◽  
Newly Hatched Larvae ◽  
First Time

The complete larval and first crab stages of the decorator crab Camposcia retusa (Latreille, 1829) are described and illustrated based on laboratory-reared material for the first time. Specimens were obtained from larvae hatched from adult crabs collected from coral reefs of Queensland, Australia. Newly hatched larvae were successfully reared to settlement as the first-stage crabs. Larval development consisted of two zoeal stages and one megalopal stage. The morphology of each larval stage was compared with those available from a previous study using material from the Red Sea. Due to substantial differences in morphology of the second zoeal and megalopal stages between the two studies, we argue that these larval stages described by the earlier report may not be that of C. retusa. Finally, the morphological characters of both larval and first crab stages of C. retusa are also compared with the corresponding stages of previously reported Inachidae. 

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