Target and Non–target site Mechanisms Confer Resistance to Glyphosate in Canadian Accessions ofConyza canadensis

Glyphosate-resistant populations ofConyza canadensishave been spreading at a rapid rate in Ontario, Canada, since first being documented in 2010. Determining the genetic relationship among existing Ontario populations is necessary to understand the spread and selection of the resistant biotypes. The objectives of this study were to: (1) characterize the genetic variation ofC. canadensisaccessions from the province of Ontario using simple sequence repeat (SSR) markers and (2) investigate the molecular mechanism (s) conferring resistance in these accessions. Ninety-eightC. canadensisaccessions were genotyped using 8 SSR markers. Germinable accessions were challenged with glyphosate to determine their dose response, and the sequences of 5-enolpyruvylshikimate-3-phosphate synthase genes 1 and 2 were obtained. Results indicate that a majority of glyphosate-resistant accessions from Ontario possessed a proline to serine substitution at position 106, which has previously been reported to confer glyphosate resistance in other crop and weed species. Accessions possessing this substitution demonstrated notably higher levels of resistance than non–target site resistant (NTSR) accessions from within or outside the growing region and were observed to form a subpopulation genetically distinct from geographically proximate glyphosate-susceptible and NTSR accessions. Although it is unclear whether other non–target site resistance mechanisms are contributing to the levels of resistance observed in target-site resistant accessions, these results indicate that, at a minimum, selection for Pro-106-Ser has occurred in addition to selection for non–target site resistance and has significantly enhanced the levels of resistance to glyphosate inC. canadensisaccessions from Ontario.

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Functional Genomics Analysis of Horseweed (Conyza canadensis) with Special Reference to the Evolution of Non–Target-Site Glyphosate Resistance

Weed Science ◽

10.1614/ws-d-09-00037.1 ◽

2010 ◽

Vol 58 (2) ◽

pp. 109-117 ◽

Cited By ~ 48

Author(s):

Joshua S. Yuan ◽

Laura L. G. Abercrombie ◽

Yongwei Cao ◽

Matthew D. Halfhill ◽

Xin Zhou ◽

...

Keyword(s):

Functional Genomics ◽

Molecular Mechanisms ◽

Glyphosate Resistance ◽

Resistance Mechanisms ◽

Target Site ◽

Environmentally Benign ◽

Conyza Canadensis ◽

Target Site Resistance ◽

Weedy Species ◽

Heterologous Microarray

The evolution of glyphosate resistance in weedy species places an environmentally benign herbicide in peril. The first report of a dicot plant with evolved glyphosate resistance was horseweed, which occurred in 2001. Since then, several species have evolved glyphosate resistance and genomic information about nontarget resistance mechanisms in any of them ranges from none to little. Here, we report a study combining iGentifier transcriptome analysis, cDNA sequencing, and a heterologous microarray analysis to explore potential molecular and transcriptomic mechanisms of nontarget glyphosate resistance of horseweed. The results indicate that similar molecular mechanisms might exist for nontarget herbicide resistance across multiple resistant plants from different locations, even though resistance among these resistant plants likely evolved independently and available evidence suggests resistance has evolved at least four separate times. In addition, both the microarray and sequence analyses identified non–target-site resistance candidate genes for follow-on functional genomics analysis.

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Point Mutations and Cytochrome P450 Can Contribute to Resistance to ACCase-Inhibiting Herbicides in Three Phalaris Species

Plants ◽

10.3390/plants10081703 ◽

2021 ◽

Vol 10 (8) ◽

pp. 1703

Author(s):

José G. Vázquez-García ◽

Joel Torra ◽

Candelario Palma-Bautista ◽

Ricardo Alcántara-de la Cruz ◽

Rafael De Prado

Keyword(s):

Point Mutations ◽

Resistance Mechanisms ◽

Target Site ◽

In Vitro Assays ◽

Cross Resistance ◽

Northern Iran ◽

Target Site Resistance ◽

Acetyl Coenzyme A Carboxylase ◽

Selection Of

Species of Phalaris have historically been controlled by acetyl-coenzyme A carboxylase (ACCase)-inhibiting herbicides; however, overreliance on herbicides with this mechanism of action has resulted in the selection of resistant biotypes. The resistance to ACCase-inhibiting herbicides was characterized in Phalaris brachystachys, Phalaris minor, and Phalaris paradoxa samples collected from winter wheat fields in northern Iran. Three resistant (R) biotypes, one of each Phalaris species, presented high cross-resistance levels to diclofop-methyl, cycloxydim, and pinoxaden, which belong to the chemical families of aryloxyphenoxypropionates (FOPs), cyclohexanediones (DIMs), and phenylpyrazolines (DENs), respectively. The metabolism of 14C-diclofop-methyl contributed to the resistance of the P. brachystachys R biotype, while no evidence of herbicide metabolism was found in P. minor or P. paradoxa. ACCase in vitro assays showed that the target sites were very sensitive to FOP, DIM, and DEN herbicides in the S biotypes of the three species, while the R Phalaris spp. biotypes presented different levels of resistance to these herbicides. ACCase gene sequencing confirmed that cross-resistance in Phalaris species was conferred by specific point mutations. Resistance in the P. brachystachys R biotype was due to target site and non-target-site resistance mechanisms, while in P. minor and P. paradoxa, only an altered target site was found.

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Non-Target-Site Resistance to Herbicides: Recent Developments

Plants ◽

10.3390/plants8100417 ◽

2019 ◽

Vol 8 (10) ◽

pp. 417 ◽

Cited By ~ 10

Author(s):

Jugulam ◽

Shyam

Keyword(s):

Weed Management ◽

Management Strategies ◽

Target Site ◽

Cross Resistance ◽

Weed Species ◽

Physiological Processes ◽

Recent Developments ◽

Target Site Resistance ◽

Resistance To Herbicides ◽

Selection Of

Non-target-site resistance (NTSR) to herbicides in weeds can be conferred as a result of the alteration of one or more physiological processes, including herbicide absorption, translocation, sequestration, and metabolism. The mechanisms of NTSR are generally more complex to decipher than target-site resistance (TSR) and can impart cross-resistance to herbicides with different modes of action. Metabolism-based NTSR has been reported in many agriculturally important weeds, although reduced translocation and sequestration of herbicides has also been found in some weeds. This review focuses on summarizing the recent advances in our understanding of the physiological, biochemical, and molecular basis of NTSR mechanisms found in weed species. Further, the importance of examining the co-existence of TSR and NTSR for the same herbicide in the same weed species and influence of environmental conditions in the altering and selection of NTSR is also discussed. Knowledge of the prevalence of NTSR mechanisms and co-existing TSR and NTSR in weeds is crucial for designing sustainable weed management strategies to discourage the further evolution and selection of herbicide resistance in weeds.

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Non-Target Site Mechanisms Endow Resistance to Glyphosate in Saltmarsh Aster (Aster squamatus)

Plants ◽

10.3390/plants10091970 ◽

2021 ◽

Vol 10 (9) ◽

pp. 1970

Author(s):

José Alfredo Domínguez-Valenzuela ◽

Ricardo Alcántara-de la Cruz ◽

Candelario Palma-Bautista ◽

José Guadalupe Vázquez-García ◽

Hugo E. Cruz-Hipolito ◽

...

Keyword(s):

Shikimic Acid ◽

Glyphosate Resistance ◽

Resistance Mechanisms ◽

Target Site ◽

Weed Species ◽

The Third ◽

Citrus Groves ◽

First Case ◽

Treated Leaf ◽

Target Site Resistance

Of the six-glyphosate resistant weed species reported in Mexico, five were found in citrus groves. Here, the glyphosate susceptibility level and resistance mechanisms were evaluated in saltmarsh aster (Aster squamatus), a weed that also occurs in Mexican citrus groves. The R population accumulated 4.5-fold less shikimic acid than S population. S plants hardly survived at 125 g ae ha−1 while most of the R plants that were treated with 1000 g ae ha−1, which suffered a strong growth arrest, showed a vigorous regrowth from the third week after treatment. Further, 5-enolpyruvylshikimate-3-phosphate basal and enzymatic activities did not diverge between populations, suggesting the absence of target-site resistance mechanisms. At 96 h after treatment, R plants absorbed ~18% less glyphosate and maintained 63% of the 14C-glyphsoate absorbed in the treated leaf in comparison to S plants. R plants metabolized twice as much (72%) glyphosate to amino methyl phosphonic acid and glyoxylate as the S plants. Three non-target mechanisms, reduced absorption and translocation and increased metabolism, confer glyphosate resistance saltmarsh aster. This is the first case of glyphosate resistance recorded for A. squamatus in the world.

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Multiple Herbicide-Resistant Weeds and Non-target Site Resistance Mechanisms: A Global Challenge for Food Production

10.3389/978-2-88971-908-2 ◽

2021 ◽

Keyword(s):

Food Production ◽

Resistance Mechanisms ◽

Target Site ◽

Herbicide Resistant ◽

Global Challenge ◽

Target Site Resistance

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Insecticide resistance selection and reversal in two strains of Aedes aegypti

Wellcome Open Research ◽

10.12688/wellcomeopenres.15974.1 ◽

2020 ◽

Vol 5 ◽

pp. 183

Author(s):

Jonathan Thornton ◽

Bruno Gomes ◽

Constância Ayres ◽

Lisa Reimer

Keyword(s):

Aedes Aegypti ◽

Insecticide Resistance ◽

Vector Competence ◽

Resistance Mechanisms ◽

Target Site ◽

Metabolic Resistance ◽

Resistance Selection ◽

Similar Phenotype ◽

Target Site Resistance ◽

Homozygous Resistant

Background: Laboratory reared mosquito colonies are essential tools to understand insecticide action. However, they differ considerably from wild populations and from each other depending on their origin and rearing conditions, which makes studying the effects of specific resistance mechanisms difficult. This paper describes our methods for establishing multiple resistant strains of Aedes aegypti from two colonies as a new resource for further research on metabolic and target site resistance. Methods: Two resistant colonies of Ae. aegypti, from Cayman and Recife, were selected through 10 generations of exposure to insecticides including permethrin, malathion and temephos, to yield eight strains with different profiles of resistance due to either target site or metabolic resistance. Resistance ratios for each insecticide were calculated for the selected and unselected strains. The frequency of kdr alleles in the Cayman strains was determined using TaqMan assays. A comparative gene expression analysis among Recife strains was conducted using qPCR in larvae (CCae3A, CYP6N12, CYP6F3, CYP9M9) and adults (CCae3A, CYP6N12, CYP6BB2, CYP9J28a). Results: In the selected strain of Cayman, mortality against permethrin reduced almost to 0% and kdr became fixated by 5 generations. A similar phenotype was seen in the unselected homozygous resistant colony, whilst mortality in the susceptible homozygous colony rose to 82.9%. The Recife strains showed different responses between exposure to adulticide and larvicide, with detoxification genes in the temephos selected strain staying similar to the baseline, but a reduction in detoxification genes displayed in the other strains. Conclusions: These selected strains, with a range of insecticide resistance phenotypes and genotypes, will support further research on the effects of target-site and/or metabolic resistance mechanisms on various life-history traits, behaviours and vector competence of this important arbovirus vector.

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Genome-wide gene expression profiling reveals that cuticle alterations and P450 detoxification are associated with pyrethroid resistance in Anopheles arabiensis populations from Ethiopia

10.1101/451336 ◽

2018 ◽

Author(s):

Eba Alemayehu Simma ◽

Wannes Dermauw ◽

Vasileia Balabanidou ◽

Simon Snoeck ◽

Astrid Bryon ◽

...

Keyword(s):

Insecticide Resistance ◽

Anopheles Arabiensis ◽

Pyrethroid Resistance ◽

Resistance Mutation ◽

Resistance Mechanisms ◽

Target Site ◽

Malaria Vectors ◽

Metabolic Resistance ◽

Genome Wide ◽

Target Site Resistance

AbstractBACKGROUNDVector control is the main intervention in malaria control and elimination strategies. However, the development of insecticide resistance is one of the major challenges for controlling malaria vectors. Anopheles arabiensis populations in Ethiopia showed resistance against both DDT and the pyrethroid deltamethrin. Although a L1014F target-site resistance mutation was present in the voltage gated sodium channel of investigated populations, the levels of resistance and biochemical studies indicated the presence of additional resistance mechanisms. In this study, we used genome-wide transcriptome profiling by RNAseq to assess differentially expressed genes between three deltamethrin and DDT resistant An. arabiensis field populations (Tolay, Asendabo, Chewaka) and two susceptible strains (Sekoru and Mozambique).RESULTSBoth RNAseq analysis and RT-qPCR showed that a glutathione-S-transferase, gstd3, and a cytochrome P450 monooxygenase, cyp6p4, were significantly overexpressed in the group of resistant populations compared to the susceptible strains, suggesting that the enzymes they encode play a key role in metabolic resistance against deltamethrin or DDT. Furthermore, a gene ontology enrichment analysis showed that expression changes of cuticle related genes were strongly associated with insecticide resistance, although this did not translate in increased thickness of the procuticle.CONCLUSIONOur transcriptome sequencing of deltamethrin/DDT resistant An. arabiensis populations from Ethiopia suggests non-target site resistance mechanisms and pave the way for further investigation of the role of cuticle composition in resistance.

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Resistance to mesosulfuron-methyl in Beckmannia syzigachne may involve ROS burst and non-target-site resistance mechanisms

Ecotoxicology and Environmental Safety ◽

10.1016/j.ecoenv.2021.113072 ◽

2022 ◽

Vol 229 ◽

pp. 113072

Author(s):

Junzhi Wang ◽

Wanfen Cao ◽

Qiushuang Guo ◽

Yang Yang ◽

Lianyang Bai ◽

...

Keyword(s):

Resistance Mechanisms ◽

Target Site ◽

Target Site Resistance ◽

Ros Burst

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Resistance Mechanisms to 2,4-D in Six Different Dicotyledonous Weeds Around the World

Agronomy ◽

10.3390/agronomy10040566 ◽

2020 ◽

Vol 10 (4) ◽

pp. 566 ◽

Cited By ~ 3

Author(s):

Candelario Palma-Bautista ◽

Antonia M. Rojano-Delgado ◽

Ignacio Dellaferrera ◽

Jesús M. Rosario ◽

Mario R. Vigna ◽

...

Keyword(s):

Resistance Mechanism ◽

Resistance Mechanisms ◽

Conyza Canadensis ◽

Weed Species ◽

Amaranthus Hybridus ◽

Resistance Factors ◽

Herbicide Degradation ◽

The World ◽

Differential Contribution

2,4-D resistance is increasing around the world due to both transgenic crops and resistance to other herbicides. The objective of the this study was to characterize the currently unknown mechanisms of 2,4-D resistance in five weed species from around the globe: Amaranthus hybridus (Argentina), Conyza canadensis (Hungary), Conyza sumatrensis (France), Hirschfeldia incana (Argentina) and Parthenium hysterophorus (Dominican Republic), using Papaver rhoeas (Spain) as a standard resistant (R) species. Dose-response trials using malathion and absorption, translocation and metabolism experiments were performed to unravel the resistance mechanisms. R plants produced at least 3-folds less ethylene than susceptible plants, confirming the resistance to 2,4-D, together with resistance factors >4. A. hybridus, P. hysterophorus and P. rhoeas showed both reduced translocation and enhanced metabolism. In the two Conyza sps., the only resistance mechanism found was enhanced metabolism. Malathion synergized with 2,4-D in all these species, indicating the role of cytochrome P450 in the herbicide degradation. In H. incana, reduced translocation was the only contributing mechanism to resistance. Among the six dicotyledonous weed species investigated, there was a differential contribution to 2,4-D resistance of enhanced metabolism and reduced translocation. Thus, extrapolating 2,4-D resistance mechanisms from one weed species to another is very risky, if even related.

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