An integrative chemometric approach and correlative metabolite networking of LC-MS and 1H NMR based urine metabolomics for radiation signatures

2022 ◽  
Author(s):  
Kiran Maan ◽  
Ruchi Baghel ◽  
Radhika Bakhshi ◽  
Seema Dhariwal ◽  
Ritu Tyagi ◽  
...  

A comprehensive overview of combining data from LC-MS and NMR using multiblock-OPLSDA analysis, correlation networking and pathway enrichment. This provided novel avenues for understanding biological perturbations post radiation injury.

2020 ◽  
Vol 19 (6) ◽  
pp. 2419-2428 ◽  
Author(s):  
Chiara Bruzzone ◽  
Ana Loizaga-Iriarte ◽  
Pilar Sánchez-Mosquera ◽  
Rubén Gil-Redondo ◽  
Ianire Astobiza ◽  
...  

PLoS ONE ◽  
2015 ◽  
Vol 10 (11) ◽  
pp. e0140993 ◽  
Author(s):  
Monica Garcia-Simon ◽  
Jose M. Morales ◽  
Vicente Modesto-Alapont ◽  
Vannina Gonzalez-Marrachelli ◽  
Rosa Vento-Rehues ◽  
...  

2021 ◽  
Vol 161 ◽  
pp. S47-S48
Author(s):  
A. van der Boog ◽  
S. David ◽  
A. Steennis ◽  
J.W. Dankbaar ◽  
T. Snijders ◽  
...  

Blood ◽  
2009 ◽  
Vol 114 (22) ◽  
pp. 1483-1483
Author(s):  
Scott Peslak ◽  
Jesse Wenger ◽  
Paul Kingsley ◽  
Anne Koniski ◽  
Jeffrey Bemis ◽  
...  

Abstract Abstract 1483 Poster Board I-506 Although the synthesis of two million red blood cells every second is essential for the maintenance of steady state levels of blood cells as well as our well-being, very little is known about the sensitivity of the erythroid lineage to injury or its kinetics and mechanisms of recovery. A novel multispectral imaging flow cytometry analysis utilizing the AMNIS ImageStream and functional colony assays were utilized to study the response of the erythroid lineage in C57Bl/6 mice following 4 Gray whole body irradiation. BrdU cell cycle analysis and erythropoietin ELISA assays were also utilized to investigate erythroid recovery after radiation injury. Two days post-radiation, all erythroid progenitors and precursors in the marrow were severely depleted. Over the next week, early-stage progenitors (BFU-E) only made a partial recovery. In marked contrast, late-stage progenitors (CFU-E) dramatically expanded in numbers at 5-6 days post-radiation to greater than 200% of normal. These CFU-E subsequently generated a wave of erythroid precursors that culminated in the emergence of circulating reticulocytes beginning at 8-9 days post-radiation. Rapid expansion of the CFU-E compartment was associated with an increase in cell cycling. CFU-E expansion was also temporally associated with an acute 20-fold increase in circulating levels of erythropoietin (EPO). Additionally, exogenous EPO administration at 4 days post-radiation resulted in further expansion of CFU-E 2 days later. Interestingly, erythroid progenitors and precursors were not found in the spleen after radiation, indicating that recovery of the erythroid lineage after direct marrow injury is not associated with extramedullary erythropoiesis. We conclude that erythroid progenitors and precursors, unlike circulating erythrocytes, are exquisitely sensitive to clastogenic insults such as radiation. Furthermore, we conclude that the acute recovery of erythropoiesis following sublethal radiation injury is centered on profound expansion and robust cycling of CFU-E. The temporal association of this CFU-E expansion both with the endogenous upregulation and with the exogenous administration of EPO suggests that CFU-E expansion is due primarily to erythropoietin stimulation. We hypothesize CFU-E expansion in the marrow may represent a novel adaptive mechanism of the erythroid lineage to acute injury. Overall, a more thorough understanding of radiation-induced erythroid injury and recovery will ultimately lead to new treatments to protect and mitigate the hematopoietic system from clastogenic agents such as radiation and chemotherapy. Disclosures: No relevant conflicts of interest to declare.


Blood ◽  
2010 ◽  
Vol 116 (21) ◽  
pp. 407-407
Author(s):  
Rebecca L Porter ◽  
Laura M Calvi

Abstract Abstract 407 Since the hematopoietic system is exquisitely sensitive to environmental and iatrogenic injury, the bone marrow microenvironment likely provides protective mechanisms during times of injury or stress. We have previously demonstrated that prostaglandin E2 (PGE2), which can be produced by many cell types in the bone marrow, targets both the bone marrow microarchitecture and primitive hematopoietic cells when administered systemically to mice (Porter, Frisch et. al., Blood, 2009). Since PGE2 is a local mediator of injury and is known to play a protective role in other cell types, we hypothesized that it could be an important microenvironmental regulator of HSPCs during times of injury. To test this hypothesis, we injured mice with a sub-lethal dose of gamma radiation, 6.5 Gy TBI, and sacrificed mice at varying time points from 1 hour to 6 days post-radiation. Bone marrow supernatant was collected and used for quantification of local PGE2 levels by ELISA. We found that, compared to non-irradiated mice, the PGE2 levels were increased greater than two-fold by 4 hours after irradiation (p=0.0030; n=3–6 mice/group), and these levels remain elevated until at least 6 days after injury (p<0.0001 by ANOVA). These data clearly demonstrate that PGE2 production is rapidly upregulated following bone marrow injury. To determine if HSPCs could be responding to this increase in local PGE2, we sorted Lin− c-Kit+ Sca1+ (LSK) cells from murine bone marrow and assayed the expression of the four PGE2 receptors, EP1-EP4. RT-PCR analysis demonstrated that all four receptors are expressed on LSK cells, suggesting that PGE2 could be acting on these primitive hematopoietic cells during times of injury. We next tested whether supplying additional PGE2 to mice could protect hematopoietic cells after injury. Mice were subjected to 6.5 Gy TBI and were treated with 0.5 mg/kg 16,16-dimethyl-PGE2 (dmPGE2) immediately after radiation and once daily thereafter until time of sacrifice. At 24 hours after radiation injury, mice that were treated with dmPGE2 had greater than 8-fold more surviving LSK cells, a population which still retains HSC repopulating activity in competitive transplantation studies, in their bone marrow compared with vehicle treated mice (n=4/group, p=0.046). Similarly, at 72 hr post-radiation, the dmPGE2 treated mice continued to have almost 2-fold greater numbers of LSK cells remaining viable in their bone marrow compared with vehicle treated mice (n=2–3/group). These data suggest that dmPGE2 treatment after bone marrow injury may provide protection, at least in the days immediately following injury, to primitive hematopoietic cells that remain capable of regenerating the hematopoietic system. To further support this idea, we also pretreated uninjured bone marrow cells in vitro with PGE2 (1 μ M) for 90 minutes and then exposed them to the chemotherapeutic agent cytarabine (Ara-C, 10 μ M for 4 hours). Pretreatment with PGE2 results in lower levels of apoptotic LSK cells compared with vehicle pre-treated LSK cells (30.26% vs. 39.02%; n=9/group; 3 independent experiments; p=0.0012). This result correlates with our in vivo radiation injury data and suggests that PGE2 may target primitive hematopoietic cells and render them more resistant to cell death from injury. Taken together, these results suggest that PGE2, which is released in the bone marrow after radiation exposure, may be an important microenvironmental regulator of HSPC response to injury, by preventing cell death, and/or increasing their recovery. Amplification of this physiological signal by treatment with exogenous PGE2 could provide a beneficial means of protecting hematopoietic cells in clinical situations of hematopoietic system injury and bone marrow transplantation, allowing patients to tolerate bone marrow suppressive treatments or to recover more easily. Further, these results also bring forth a potential concern about the safety of blocking prostaglandin synthesis by using anti-inflammatory medications during times of bone marrow injury. Disclosures: No relevant conflicts of interest to declare.


Fuel ◽  
2016 ◽  
Vol 181 ◽  
pp. 660-669 ◽  
Author(s):  
Lucas M. Duarte ◽  
Paulo R. Filgueiras ◽  
Samantha R.C. Silva ◽  
Julio C.M. Dias ◽  
Lize M.S.L. Oliveira ◽  
...  

Molecules ◽  
2019 ◽  
Vol 24 (24) ◽  
pp. 4500 ◽  
Author(s):  
Oana Romina Botoran ◽  
Roxana Elena Ionete ◽  
Marius Gheorghe Miricioiu ◽  
Diana Costinel ◽  
Gabriel Lucian Radu ◽  
...  

This study aims to assess the capability of the 1H-NMR profiling of fruits from different genera in combination with multivariate data analysis to provide feasible information for fruit juices’ authenticity in terms of botanical origin. Nine fruit varieties from four genera were selected for the experimental plan. The juice obtained from the fruits was characterized using the 1H-NMR technique, selecting the obtained amino acid profile of fruits as a potential specific fingerprint. Due to the complex information provided by the NMR spectra, a chemometric approach of the data was further applied to enable the differentiation of the fruit samples, highlighting thus its suitability as a discrimination tool for the varietal origin. The advantage of this analytical approach is given by the relatively simple working procedure, which consists of an easy, fast, and accessible preparation stage while providing complex information on fruit composition.


2000 ◽  
Vol 147 (1) ◽  
pp. 89-94 ◽  
Author(s):  
Robert J.S Brown ◽  
Francesco Capozzi ◽  
Claudio Cavani ◽  
Mauro A Cremonini ◽  
Massimiliano Petracci ◽  
...  

2016 ◽  
Vol 131 (2) ◽  
pp. 277-281 ◽  
Author(s):  
J. A. Molad ◽  
D. T. Blumenthal ◽  
F. Bokstein ◽  
M. Findler ◽  
I. Finkel ◽  
...  

2020 ◽  
Vol 152 ◽  
pp. S465-S466
Author(s):  
A.T.J. Van Der Boog ◽  
J.J.C. Verhoeff ◽  
J.W. Dankbaar ◽  
T.J. Snijders ◽  
P.A.J. Robe

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