Fundamental principles of vascular network topology

2017 ◽  
Vol 45 (3) ◽  
pp. 839-844 ◽  
Author(s):  
Veronika S. Kopylova ◽  
Stanislav E. Boronovskiy ◽  
Yaroslav R. Nartsissov

The vascular system is arguably the most important biological system in many organisms. Although the general principles of its architecture are simple, the growth of blood vessels occurs under extreme physical conditions. Optimization is an important aspect of the development of computational models of the vascular branching structures. This review surveys the approaches used to optimize the topology and estimate different geometrical parameters of the vascular system. The review is focused on optimizations using complex cost functions based on the minimum total energy principle and the relationship between the laws of growth and precise vascular network topology. Experimental studies of vascular networks in different species are also discussed.

1995 ◽  
Vol 20 (4) ◽  
pp. 488-492 ◽  
Author(s):  
R. WOLFRAM-GABEL ◽  
H. SICK

The vascular networks of the periphery of the fingernail have been studied on fingers of adults, foetuses and neonates, by injecting the vascular system with gelatinous Indian ink. The nail is an avascular structure, partially covered by the nail wall. It is lying on the nail bed which is prolonged forwards with the hyponychium. Each part of the nail apparatus presents a characteristic vascular network derived from dorsal collaterals arising from the palmar digital vessels and from their arcades. These networks are papillary, pseudopapillary, reticular and subdermal. Their morphology and density vary according to their localization and correspond with histological variations of the different parts of the nail apparatus. Thus, the germinal part of the nail bed shows poor vascularization. It is responsible for the colour of the lunula. The sterile part and the hyponychium have dense vascular networks with glomus bodies.


2020 ◽  
Author(s):  
Daria Stepanova ◽  
Helen M. Byrne ◽  
Philip K. Maini ◽  
Tomás Alarcón

AbstractWe introduce a hybrid two-dimensional multiscale model of angiogenesis, the process by which endothelial cells (ECs) migrate from a pre-existing vascular bed in response to local environmental cues and cell-cell interactions, to create a new vascular network. Recent experimental studies have highlighted a central role of cell rearrangements in the formation of angiogenic networks. Our model accounts for this phenomenon via the heterogeneous response of ECs to their microenvironment. These cell rearrangements, in turn, dynamically remodel the local environment. The model reproduces characteristic features of angiogenic sprouting that include branching, chemotactic sensitivity, the brush border effect, and cell mixing. These properties, rather than being hardwired into the model, emerge naturally from the gene expression patterns of individual cells. After calibrating and validating our model against experimental data, we use it to predict how the structure of the vascular network changes as the baseline gene expression levels of the VEGF-Delta-Notch pathway, and the composition of the extracellular environment, vary. In order to investigate the impact of cell rearrangements on the vascular network structure, we introduce the mixing measure, a scalar metric that quantifies cell mixing as the vascular network grows. We calculate the mixing measure for the simulated vascular networks generated by ECs of different lineages (wild type cells and mutant cells with impaired expression of a specific receptor). Our results show that the time evolution of the mixing measure is directly correlated to the generic features of the vascular branching pattern, thus, supporting the hypothesis that cell rearrangements play an essential role in sprouting angiogenesis. Furthermore, we predict that lower cell rearrangement leads to an imbalance between branching and sprout elongation. Since the computation of this statistic requires only individual cell trajectories, it can be computed for networks generated in biological experiments, making it a potential biomarker for pathological angiogenesis.Author summaryAngiogenesis, the process by which new blood vessels are formed by sprouting from the pre-existing vascular bed, plays a key role in both physiological and pathological processes, including tumour growth. The structure of a growing vascular network is determined by the coordinated behaviour of endothelial cells in response to various signalling cues. Recent experimental studies have highlighted the importance of cell rearrangements as a driver for sprout elongation. However, the functional role of this phenomenon remains unclear. We formulate a new multiscale model of angiogenesis which, by accounting explicitly for the complex dynamics of endothelial cells within growing angiogenic sprouts, is able to produce generic features of angiogenic structures (branching, chemotactic sensitivity, cell mixing, etc.) as emergent properties of its dynamics. We validate our model against experimental data and then use it to quantify the phenomenon of cell mixing in vascular networks generated by endothelial cells of different lineages. Our results show that there is a direct correlation between the time evolution of cell mixing in a growing vascular network and its branching structure, thus paving the way for understanding the functional role of cell rearrangements in angiogenesis.


Author(s):  
Temitope Mapayi ◽  
Pius A. Owolawi ◽  
Adedayo O. Adio

Automated retinal vascular network detection and analysis using digital retinal images continue to play a major role in the field of biomedicine for the diagnosis and management of various forms of human ailments like hypertension, diabetic retinopathy, retinopathy of prematurity, glaucoma and cardiovascular diseases. Although several literature have implemented different automatic approaches of detecting blood vessels in the retinal and also determining their tortuous states, the results obtained show that there are needs for further investigation on more efficient ways to detect and characterize the blood vessel network tortuosity states. This paper implements the use of an adaptive thresholding method based on local spatial relational variance (LSRV) for the detection of the retinal vascular networks. The suitability of a multi-layer perceptron artificial neural network (MLP-ANN) technique for the tortuosity characterization of retinal blood vascular networks is also presented in this paper. Some vessel geometric features of detected vessels are fed into ANN classifier for the automatic classification of the retinal vascular networks as being tortuous vessels or normal vessels. Experimental studies conducted on DRIVE and STARE databases show that the vascular network detection results obtained from the method implemented in this paper detects large and thin vascular networks in the retina. In comparison to preious methods in the literature, the proposed method for vascular network segmentation achieved better performance than several methods in the literature with a mean accuracy value of 95.04% and mean sensitivity value of 75.16% on DRIVE and mean accuracy value of 94.02% and average sensitivity value of 76.55% on STARE with computational processing time of 4.5 seconds and 9.4 seconds on DRIVE and STARE respectively. The MLP-ANN method proposed for the vascular network tortuosity characterization achieves promising accuracy rates of 77.5%, 80%, 83.33%, 85%, 86.67% and 100% for varying training sample sizes.


2019 ◽  
Vol 316 (5) ◽  
pp. H1113-H1123 ◽  
Author(s):  
Sameed Ahmed ◽  
Rui Hu ◽  
Jessica Leete ◽  
Anita T. Layton

Sex differences in blood pressure and the prevalence of hypertension are found in humans and animal models. Moreover, there has been a recent explosion of data concerning sex differences in nitric oxide, the renin-angiotensin-aldosterone system, inflammation, and kidney function. These data have the potential to reveal the mechanisms underlying male-female differences in blood pressure control. To elucidate the interactions among the multitude of physiological processes involved, one may apply computational models. In this review, we describe published computational models that represent key players in blood pressure regulation, and highlight sex-specific models and their findings.


2017 ◽  
Author(s):  
Benjamin Davies

Computer simulation is a tool increasingly used by archaeologists to build theories about past human activity; however, simulation has had a limited role theorising about the relationship between past behaviours and the formation of observed patterning in the material record. This paper visits the argument for using simulation as a means of addressing the gap that exists between archaeological interpretations of past behaviours and their physical residues. It is argued that simulation is used for much the same reason that archaeologists use ethnographic or experimental studies, and that computational models can help to address some of the practical limitations of these approaches to record formation. A case study from arid Australia, examining the effects of episodic surface erosion on the visibility of the record, shows how simple, generative simulations, grounded in formational logic, can be used to compare different explanatory mechanisms and suggest tests of the archaeological record itself.


Materials ◽  
2020 ◽  
Vol 13 (6) ◽  
pp. 1328 ◽  
Author(s):  
Cristina De Nardi ◽  
Diane Gardner ◽  
Anthony Duncan Jefferson

This paper presents a new form of biomimetic cementitious material, which employs 3D-printed tetrahedral mini-vascular networks (MVNs) to store and deliver healing agents to damage sites within cementitious matrices. The MVNs are required to not only protect the healing agent for a sufficient period of time but also survive the mixing process, release the healing agent when the cementitious matrix is damaged, and have minimal impact on the physical and mechanical properties of the host cementitious matrix. A systematic study is described which fulfilled these design requirements and determined the most appropriate form and material for the MVNs. A subsequent series of experiments showed that MVNs filled with sodium silicate, embedded in concrete specimens, are able to respond effectively to damage, behave as a perfusable vascular system and thus act as healing agent reservoirs that are available for multiple damage-healing events. It was also proved that healing agents encapsulated within these MVNs can be transported to cracked zones in concrete elements under capillary driving action, and produce a recovery of strength, stiffness and fracture energy.


1996 ◽  
Vol 49 (3) ◽  
pp. 155-199 ◽  
Author(s):  
Ahmed K. Noor ◽  
W. Scott Burton ◽  
Charles W. Bert

The focus of this review is on the hierarchy of computational models for sandwich plates and shells, predictor-corrector procedures, and the sensitivity of the sandwich response to variations in the different geometric and material parameters. The literature reviewed is devoted to the following application areas: heat transfer problems; thermal and mechanical stresses (including boundary layer and edge stresses); free vibrations and damping; transient dynamic response; bifurcation buckling, local buckling, face-sheet wrinkling and core crimping; large deflection and postbuckling problems; effects of discontinuities (eg, cutouts and stiffeners), and geometric changes (eg, tapered thickness); damage and failure of sandwich structures; experimental studies; optimization and design studies. Over 800 relevant references are cited in this review, and another 559 references are included in a supplemental bibliography for completeness. Extensive numerical results are presented for thermally stressed sandwich panels with composite face sheets showing the effects of variation in their geometric and material parameters on the accuracy of the free vibration response, and the sensitivity coefficients predicted by eight different modeling approaches (based on two-dimensional theories). The standard of comparison is taken to be the analytic three-dimensional thermoelasticity solutions. Some future directions for research on the modeling of sandwich plates and shells are outlined.


Author(s):  
Alex Mayes ◽  
Phillip Wiseman ◽  
Kshitij P. Gawande

Abstract American Society of Mechanical Engineers (ASME) Boiler and Pressure Vessel Code, Section III, Division 1, Subsection NF, Subparagraph NF-3121.11 does not require that thermal stresses in supports be evaluated. Historically, pipe support engineers have not been concerned with thermal stresses of pipe and component supports, but determining material temperature limits and allowable stresses have been a major role in designing and analyzing supports. Thus, heat transfer is often investigated in finding the temperature of pipe supports and parts of pipe supports that are not in direct contact with pipe or pipe components. There are also other Codes and standards that permit a reduction of temperature away from the outer surface of pipe or pipe components. In some but not all cases, Codes and standards explicitly address reduction of temperature for applications of utilizing thermal insulation. Additionally, the temperature distribution is established by specific geometrical parameters and their respective equations for employment by the pipe support engineer. These reductions are explored by utilizing fundamentals of heat transfer. Additionally, steady-state and transient thermal Finite Element Analyses (FEA) are used to establish computational models of simple geometric bodies in a range of atmospheric conditions. The effects of insulation on the thermal distribution are also represented through closed form solutions and FEA. The results of these analyses allow for assessment of, and recommendations for, the treatment of temperature reduction in Codes and standards.


2015 ◽  
Vol 113 (2) ◽  
pp. 509-523 ◽  
Author(s):  
Vishwa Goudar ◽  
Dean V. Buonomano

Determining the order of sensory events separated by a few hundred milliseconds is critical to many forms of sensory processing, including vocalization and speech discrimination. Although many experimental studies have recorded from auditory order-sensitive and order-selective neurons, the underlying mechanisms are poorly understood. Here we demonstrate that universal properties of cortical synapses—short-term synaptic plasticity of excitatory and inhibitory synapses—are well suited for the generation of order-selective neural responses. Using computational models of canonical disynaptic circuits, we show that the dynamic changes in the balance of excitation and inhibition imposed by short-term plasticity lead to the generation of order-selective responses. Parametric analyses predict that among the forms of short-term plasticity expressed at excitatory-to-excitatory, excitatory-to-inhibitory, and inhibitory-to-excitatory synapses, the single most important contributor to order-selectivity is the paired-pulse depression of inhibitory postsynaptic potentials (IPSPs). A topographic model of the auditory cortex that incorporates short-term plasticity accounts for both context-dependent suppression and enhancement in response to paired tones. Together these results provide a framework to account for an important computational problem based on ubiquitous synaptic properties that did not yet have a clearly established computational function. Additionally, these studies suggest that disynaptic circuits represent a fundamental computational unit that is capable of processing both spatial and temporal information.


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