Regulatory long non-coding RNAs in root growth and development

Author(s):  
Thomas Roulé ◽  
Martin Crespi ◽  
Thomas Blein

As sessile organisms, plants have evolved sophisticated mechanisms of gene regulation to cope with changing environments. Among them, long non-coding RNAs (lncRNAs) are a class of RNAs regulating gene expression at both transcriptional and post-transcriptional levels. They are highly responsive to environmental cues or developmental processes and are generally involved in fine-tuning plant responses to these signals. Roots, in addition to anchoring the plant to the soil, allow it to absorb the major part of its mineral nutrients and water. Furthermore, roots directly sense environmental constraints such as mineral nutrient availability and abiotic or biotic stresses and dynamically adapt their growth and architecture. Here, we review the role of lncRNAs in the control of root growth and development. In particular, we highlight their action in fine-tuning primary root growth and the development of root lateral organs, such as lateral roots and symbiotic nodules. Lastly, we report their involvement in plant response to stresses and the regulation of nutrient assimilation and homeostasis, two processes leading to the modification of root architecture. LncRNAs could become interesting targets in plant breeding programs to subtly acclimate crops to coming environmental changes.

2014 ◽  
Vol 33 (5) ◽  
pp. 745-753 ◽  
Author(s):  
Huiyu Tian ◽  
Yuebin Jia ◽  
Tiantian Niu ◽  
Qianqian Yu ◽  
Zhaojun Ding

2021 ◽  
Vol 12 ◽  
Author(s):  
Lijie Li ◽  
Qian Li ◽  
Kyle E. Davis ◽  
Caitlin Patterson ◽  
Sando Oo ◽  
...  

The mechanism of miRNA-mediated root growth and development in response to nutrient deficiency in peanut (Arachis hypogaea L.) is still unclear. In the present study, we found that both nitrogen (N) and potassium (K) deficiency resulted in a significant reduction in plant growth, as indicated by the significantly decreased dry weight of both shoot and root tissues under N or K deficiency. Both N and K deficiency significantly reduced the root length, root surface area, root volume, root vitality, and weakened root respiration, as indicated by the reduced O2 consuming rate. N deficiency significantly decreased primary root length and lateral root number, which might be associated with the upregulation of miR160, miR167, miR393, and miR396, and the downregulation of AFB3 and GRF. The primary and lateral root responses to K deficiency were opposite to that of the N deficiency condition. The upregulated miR156, miR390, NAC4, ARF2, and AFB3, and the downregulated miR160, miR164, miR393, and SPL10 may have contributed to the growth of primary roots and lateral roots under K deficiency. Overall, roots responded differently to the N or K deficiency stresses in peanuts, potentially due to the miRNA-mediated pathway and mechanism.


2018 ◽  
Vol 19 (11) ◽  
pp. 3656 ◽  
Author(s):  
Hua Qin ◽  
Rongfeng Huang

Roots are important plant ground organs, which absorb water and nutrients to control plant growth and development. Phytohormones have been known to play a crucial role in the regulation of root growth, such as auxin and ethylene, which are central regulators of this process. Recent findings have revealed that root development and elongation regulated by ethylene are auxin dependent through alterations of auxin biosynthesis, transport and signaling. In this review, we focus on the recent advances in the study of auxin and auxin–ethylene crosstalk in plant root development, demonstrating that auxin and ethylene act synergistically to control primary root and root hair growth, but function antagonistically in lateral root formation. Moreover, ethylene modulates auxin biosynthesis, transport and signaling to fine-tune root growth and development. Thus, this review steps up the understanding of the regulation of auxin and ethylene in root growth.


1990 ◽  
Vol 8 (4) ◽  
pp. 215-220 ◽  
Author(s):  
Edward F. Gilman

Abstract Root form is governed by seedling genetics and soil characteristics including texture, compaction, depth to the water table, fertility, moisture content and other factors. Trees develop lateral roots growing parallel to the surface of the soil. These are generally located in the top 30 cm (12 in) of soil. Fine roots emerge from lateral roots and grow into the soil close to the surface. If soil conditions permit, some trees grow tap and other vertically oriented roots capable of penetrating several feet into the soil. Many trees, particularly those planted in urban landscapes, do not generate tap roots. Lateral roots spread to well beyond the edge of the branches. Their growth in governed by competition from other plants, available water, soil temperature, fertility, stage of shoot growth and other factors.


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