scholarly journals Surface densities prewet a near-critical membrane

2021 ◽  
Vol 118 (40) ◽  
pp. e2103401118
Author(s):  
Mason Rouches ◽  
Sarah L. Veatch ◽  
Benjamin B. Machta

Recent work has highlighted roles for thermodynamic phase behavior in diverse cellular processes. Proteins and nucleic acids can phase separate into three-dimensional liquid droplets in the cytoplasm and nucleus and the plasma membrane of animal cells appears tuned close to a two-dimensional liquid–liquid critical point. In some examples, cytoplasmic proteins aggregate at plasma membrane domains, forming structures such as the postsynaptic density and diverse signaling clusters. Here we examine the physics of these surface densities, employing minimal simulations of polymers prone to phase separation coupled to an Ising membrane surface in conjunction with a complementary Landau theory. We argue that these surface densities are a phase reminiscent of prewetting, in which a molecularly thin three-dimensional liquid forms on a usually solid surface. However, in surface densities the solid surface is replaced by a membrane with an independent propensity to phase separate. We show that proximity to criticality in the membrane dramatically increases the parameter regime in which a prewetting-like transition occurs, leading to a broad region where coexisting surface phases can form even when a bulk phase is unstable. Our simulations naturally exhibit three-surface phase coexistence even though both the membrane and the polymer bulk only display two-phase coexistence on their own. We argue that the physics of these surface densities may be shared with diverse functional structures seen in eukaryotic cells.

2021 ◽  
Author(s):  
Mason Rouches ◽  
Sarah Veatch ◽  
Benjamin Machta

Recent work has highlighted roles for thermodynamic phase behavior in diverse cellular processes. Proteins and nucleic acids can phase separate into three-dimensional liquid droplets in the cytoplasm and nucleus and the plasma membrane of animal cells appears tuned close to a two-dimensional liquid-liquid critical point. In some examples, cytoplasmic proteins aggregate at plasma membrane domains, forming structures such as the post-synaptic density and diverse signaling clusters. Here we examine the physics of these surface densities, employing minimal simulations of co-acervating polymers coupled to an Ising membrane surface in conjunction with a complementary Landau theory. We argue that these surface densities are a novel phase reminiscent of pre-wetting, in which a molecularly thin three-dimensional liquid forms on a usually solid surface. However, in surface densities the solid surface is replaced by a membrane with an independent propensity to phase separate. We show that proximity to criticality in the membrane dramatically increases the parameter regime in which a pre-wetting-like transition occurs, leading to a broad region where coexisting surface phases can form even when a bulk phase is unstable. Our simulations naturally exhibit three surface phase coexistence even though both the membrane and the polymer bulk can only display two phase coexistence on their own. We argue that the physics of these surface densities enables diverse functions seen in Eukaryotic cells.


Author(s):  
R. C. Payne ◽  
A. J. White

The present paper describes a three-dimensional computational method developed to solve the flow of a two-phase air-water mixture, including the effects of evaporation for a monodispersion of liquid droplets. The calculations employ a fully Eulerian method for the conservation of droplet number and liquid mass and are applicable to multiple blade rows, both stationary and rotating. The method is first tested to ensure that it computes the correct droplet evaporation rate and the correct physical behavior for evaporation within a 1D duct. Results are then presented for flow within a single compressor stage, i.e., a rotor-stator combination.


Author(s):  
R. C. Payne ◽  
A. J. White

The present paper describes a three-dimensional computational method developed to solve the flow of a two-phase airwater mixture, including the effects of evaporation for a monodispersion of liquid droplets. The calculations employ a fully Eulerian method for the conservation of droplet number and liquid mass and are applicable to multiple blade rows, both stationary and rotating. The method is first tested to ensure that it computes the correct droplet evaporation rate and the correct physical behaviour for evaporation within a 1-D duct. Results are then presented for flow within a single compressor stage — i.e., a rotor-stator combination.


Author(s):  
James Cronshaw ◽  
Jamison E. Gilder

Adenosine triphosphatase (ATPase) activity has been shown to be associated with numerous physiological processes in both plants and animal cells. Biochemical studies have shown that in higher plants ATPase activity is high in cell wall preparations and is associated with the plasma membrane, nuclei, mitochondria, chloroplasts and lysosomes. However, there have been only a few ATPase localization studies of higher plants at the electron microscope level. Poux (1967) demonstrated ATPase activity associated with most cellular organelles in the protoderm cells of Cucumis roots. Hall (1971) has demonstrated ATPase activity in root tip cells of Zea mays. There was high surface activity largely associated with the plasma membrane and plasmodesmata. ATPase activity was also demonstrated in mitochondria, dictyosomes, endoplasmic reticulum and plastids.


Author(s):  
M.B. Braunfeld ◽  
M. Moritz ◽  
B.M. Alberts ◽  
J.W. Sedat ◽  
D.A. Agard

In animal cells, the centrosome functions as the primary microtubule organizing center (MTOC). As such the centrosome plays a vital role in determining a cell's shape, migration, and perhaps most importantly, its division. Despite the obvious importance of this organelle little is known about centrosomal regulation, duplication, or how it nucleates microtubules. Furthermore, no high resolution model for centrosomal structure exists.We have used automated electron tomography, and reconstruction techniques in an attempt to better understand the complex nature of the centrosome. Additionally we hope to identify nucleation sites for microtubule growth.Centrosomes were isolated from early Drosophila embryos. Briefly, after large organelles and debris from homogenized embryos were pelleted, the resulting supernatant was separated on a sucrose velocity gradient. Fractions were collected and assayed for centrosome-mediated microtubule -nucleating activity by incubating with fluorescently-labeled tubulin subunits. The resulting microtubule asters were then spun onto coverslips and viewed by fluorescence microscopy.


Author(s):  
Tamas Szili-Torok ◽  
Jens Rump ◽  
Torsten Luther ◽  
Sing-Chien Yap

Abstract Better understanding of the lead curvature, movement and their spatial distribution may be beneficial in developing lead testing methods, guiding implantations and improving life expectancy of implanted leads. Objective The aim of this two-phase study was to develop and test a novel biplane cine-fluoroscopy-based method to evaluate input parameters for bending stress in leads based on their in vivo 3D motion using precisely determined spatial distributions of lead curvatures. Potential tensile, compressive or torque forces were not subjects of this study. Methods A method to measure lead curvature and curvature evolution was initially tested in a phantom study. In the second phase using this model 51 patients with implanted ICD leads were included. A biplane cine-fluoroscopy recording of the intracardiac region of the lead was performed. The lead centerline and its motion were reconstructed in 3D and used to define lead curvature and curvature changes. The maximum absolute curvature Cmax during a cardiac cycle, the maximum curvature amplitude Camp and the maximum curvature Cmax@amp at the location of Camp were calculated. These parameters can be used to characterize fatigue stress in a lead under cyclical bending. Results The medians of Camp and Cmax@amp were 0.18 cm−1 and 0.42 cm−1, respectively. The median location of Cmax was in the atrium whereas the median location of Camp occurred close to where the transit through the tricuspid valve can be assumed. Increased curvatures were found for higher slack grades. Conclusion Our results suggest that reconstruction of 3D ICD lead motion is feasible using biplane cine-fluoroscopy. Lead curvatures can be computed with high accuracy and the results can be implemented to improve lead design and testing.


2021 ◽  
Vol 11 (15) ◽  
pp. 6972
Author(s):  
Lihua Cui ◽  
Fei Ma ◽  
Tengfei Cai

The cavitation phenomenon of the self-resonating waterjet for the modulation of erosion characteristics is investigated in this paper. A three-dimensional computational fluid dynamics (CFD) model was developed to analyze the unsteady characteristics of the self-resonating jet. The numerical model employs the mixture two-phase model, coupling the realizable turbulence model and Schnerr–Sauer cavitation model. Collected data from experimental tests were used to validate the model. Results of numerical simulations and experimental data frequency bands obtained by the Fast Fourier transform (FFT) method were in very good agreement. For better understanding the physical phenomena, the velocity, the pressure distributions, and the cavitation characteristics were investigated. The obtained results show that the sudden change of the flow velocity at the outlet of the nozzle leads to the forms of the low-pressure zone. When the pressure at the low-pressure zone is lower than the vapor pressure, the cavitation occurs. The flow field structure of the waterjet can be directly perceived through simulation, which can provide theoretical support for realizing the modulation of the erosion characteristics, optimizing nozzle structure.


1967 ◽  
Vol 89 (4) ◽  
pp. 577-586 ◽  
Author(s):  
P. Cooper

A model is developed for analytically determining pump inducer performance in both the single-phase and cavitating flow regimes. An equation of state for vaporizing flow is used in an approximate, three-dimensional analysis of the flow field. The method accounts for losses and yields internal distributions of fluid pressure, velocity, and density together with the resulting overall efficiency and pressure rise. The results of calculated performance of two sample inducers are presented. Comparison with recent theory for fluid thermal effects on suction head requirements is made with the aid of a resulting dimensionless vaporization parameter.


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