Screening human lung cancer with predictive models of serum magnetic resonance spectroscopy metabolomics

2021 ◽  
Vol 118 (51) ◽  
pp. e2110633118
Author(s):  
Tjada A. Schult ◽  
Mara J. Lauer ◽  
Yannick Berker ◽  
Marcella R. Cardoso ◽  
Lindsey A. Vandergrift ◽  
...  

The current high mortality of human lung cancer stems largely from the lack of feasible, early disease detection tools. An effective test with serum metabolomics predictive models able to suggest patients harboring disease could expedite triage patient to specialized imaging assessment. Here, using a training-validation-testing-cohort design, we establish our high-resolution magic angle spinning (HRMAS) magnetic resonance spectroscopy (MRS)-based metabolomics predictive models to indicate lung cancer presence and patient survival using serum samples collected prior to their disease diagnoses. Studied serum samples were collected from 79 patients before (within 5.0 y) and at lung cancer diagnosis. Disease predictive models were established by comparing serum metabolomic patterns between our training cohorts: patients with lung cancer at time of diagnosis, and matched healthy controls. These predictive models were then applied to evaluate serum samples of our validation and testing cohorts, all collected from patients before their lung cancer diagnosis. Our study found that the predictive model yielded values for prior-to-detection serum samples to be intermediate between values for patients at time of diagnosis and for healthy controls; these intermediate values significantly differed from both groups, with an F1 score = 0.628 for cancer prediction. Furthermore, values from metabolomics predictive model measured from prior-to-diagnosis sera could significantly predict 5-y survival for patients with localized disease.

2020 ◽  
Vol 47 (9) ◽  
pp. 4125-4136
Author(s):  
Noemi Garau ◽  
Chiara Paganelli ◽  
Paul Summers ◽  
Wookjin Choi ◽  
Sadegh Alam ◽  
...  

Author(s):  
Byron Enrique Urizar Catalan ◽  
Belén Callejón Leblic ◽  
Victoria Ignacio Barrios ◽  
Eva Vázquez Gandullo ◽  
Rocio Baya Arenas ◽  
...  

2021 ◽  
Vol 18 (2) ◽  
pp. 129-139
Author(s):  
Sai Ren ◽  
Xiaodong Ren ◽  
Haiqin Guo ◽  
Lan Liang ◽  
Kun Wei ◽  
...  

Aim: To explore the role of urine cell-free DNA (ucfDNA) concentration and integrity indexes as potential biomarkers for lung cancer diagnosis. Materials & methods: Quantitative real-time PCR targeting Arthrobacter luteus ( ALU) repeats at three size fragments ( ALU-60, 115 and 247 bp) was performed in 55 lung cancer patients and 35 healthy individuals. Results: ucfDNA concentration and integrity indexes were significantly higher in lung cancer patients than in healthy controls. The area under the receiver operating characteristic curve for differentiating patients with stage I/II from healthy controls by ALU fragments concentration were 0.856, 0.909 and 0.932, respectively. In addition, the ucfDNA integrity indexes in patients with lymph node metastasis were significantly higher than in patients with non-metastatic. Conclusion: ucfDNA concentration and integrity indexes could serve as promising biomarkers for lung cancer diagnosis.


2013 ◽  
Author(s):  
Hailiang Huang ◽  
Emily A. Decelle ◽  
Yannick Berker ◽  
Andreas Schuler ◽  
Isabel Dittman ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document