scholarly journals Molecular Mediators for Raft-dependent Endocytosis of Syndecan-1, a Highly Conserved, Multifunctional Receptor

2013 ◽  
Vol 288 (20) ◽  
pp. 13988-13999 ◽  
Author(s):  
Keyang Chen ◽  
Kevin Jon Williams

Endocytosis via rafts has attracted considerable recent interest, but the molecular mediators remain incompletely characterized. Here, we focused on the syndecan-1 heparan sulfate proteoglycan, a highly conserved, multifunctional receptor that we previously showed to undergo raft-dependent endocytosis upon clustering. Alanine scanning mutagenesis of three to five consecutive cytoplasmic residues at a time revealed that a conserved juxtamembrane motif, MKKK, was the only region required for efficient endocytosis after clustering. Endocytosis of clustered syndecan-1 occurs in two phases, each requiring a kinase and a corresponding cytoskeletal partner. In the initial phase, ligands trigger rapid MKKK-dependent activation of ERK and the localization of syndecan-1 into rafts. Activation of ERK drives the dissociation of syndecan-1 from α-tubulin, a molecule that may act as an anchor for syndecan-1 at the plasma membrane in the basal state. In the second phase, Src family kinases phosphorylate tyrosyl residues within the transmembrane and cytoplasmic regions of syndecan-1, a process that also requires MKKK. Tyrosine phosphorylation of syndecan-1 triggers the robust recruitment of cortactin, which we found to be an essential mediator of efficient actin-dependent endocytosis. These findings represent the first detailed characterization of the molecular events that drive endocytosis of a raft-dependent receptor and identify a novel endocytic motif, MKKK. Moreover, the results provide new tools to study syndecan function and regulation during uptake of its biologically and medically important ligands, such as HIV-1, atherogenic postprandial remnant lipoproteins, and molecules implicated in Alzheimer disease.

Water ◽  
2021 ◽  
Vol 13 (20) ◽  
pp. 2851
Author(s):  
María Fernández-Raga ◽  
Marco Cabeza-Ortega ◽  
Víctor González-Castro ◽  
Piet Peters ◽  
Meindert Commelin ◽  
...  

Measuring the characteristics of raindrops is essential for different processes studies. There have been many methods used throughout history to measure raindrops. In recent years, automatic image recognition and processing systems have been used with high-speed cameras to characterize rainfall by obtaining the spectrum of droplet sizes and their speeds and thus being able to use this technology to calibrate rainfall simulators. In this work, two phases were carried out: in the first one, individual drops with terminal speeds of different sizes were measured and processed both in speed and in shape with a high-speed camera; and in the second phase, a calibration procedure was designed but in multidrop images, determining the characteristics of the drops produced by a rain simulator. According to results, the real shape of each drop depending on the size was determined, from round to ovaloid shapes, and the terminal velocity of water drops with different sizes was measured. Based on the rain images used to calibrate a rainfall simulator, it was observed that, with a higher intensity of rain, the drops produced were smaller, which contrasts with real rain, in which just the opposite happens. This calibration evaluates their resemblance to reality, calculates the real kinetic energy of the rain they produce and see if they can be used to model events in nature.


Author(s):  
NURUL AIN SYUKRIYAH AHMAD MUHAMUD ◽  
SYAZWANI ITRI AMRAN

Epidemiological studies have proven the influences of tea consumption in prevention of chronic diseases. Tea (Camellia sinensis) is a major source of epigallocatechin-3-gallate (EGCG) compound with pharmacological properties such as anti-obesity, anti-diabetes, anti-inflammation. The aims of this study is to analyze and compare the EGCG content in commercialized tea-based products, infusion tea and ready-to-drink tea beverages available in the local market. This study is divided into two phases. The first phase involved the extraction of EGCG compound from four types of tea namely as white tea (WT), green tea (GT), oolong tea (OT) and black tea (BT) using aqueous and methanol extraction techniques. The amount of EGCG is determined using HPLC. The second phase involved the characterization of EGCG compound in infusion tea bags (ITB) and ready-to-drink tea beverages (RTD) using HPLC. Our findings recorded that GT contain the highest EGCG concentration in comparison to other tea types using both methanol and aqueous extraction methods. Temperature and extraction time have influence on the extraction yield. This study also revealed that ready-to-drink tea beverages contains significantly lower level of EGCG compared to the infusion tea hence makes ready-to-drink beverages less healthy for consumption especially for obese and diabetics individuals.


2014 ◽  
Vol 936 ◽  
pp. 695-700 ◽  
Author(s):  
Nelson Levandowski ◽  
Nelson H.A. Camargo ◽  
Daiara F. Silva ◽  
Gisele M.L. Dalmônico ◽  
Priscila F. Franczak

The present research paper centers on physicochemical characterization of six nanostructured alloplastic bone substitutes developed at Santa Catarina State University (UDESC Brazil). In addition to identifying the main phases, the focus was to measure the morphological and microstructural features, which are believed to be crucial for controlling and guiding biological and molecular events. The studied samples exhibited rounded granules measuring 200μm 10(PO4)6(OH)2] was found as main phase for HAp, BCP and HAp/Al2O3 biomaterials. For HAp/TiO2n, HAp/SiO2n and β-TCP, the major phase was beta tricalcium phosphate [Ca3(PO4)2-β]. The results demonstrate that the presence of a second phase of nanometer order, at a hydroxyapatite bioceramic matrix, may modify the surface diffusion of the grains and the phase transformation kinetics of hydroxyapatite and beta tricalcium phosphate at temperatures up to 1100°C.


2016 ◽  
Vol 20 (2) ◽  
pp. 369-373
Author(s):  
E.P. Akhator ◽  
D.I. Igbinomwanhia ◽  
A.I. Obanor

The work reported in this paper investigated the potentials of commercial biogas production from biodegradable waste in Benin metropolis. The study was carried out in two phases. The first phase involved characterization of solid waste generated and determination of the quantity of potential feed stock for biogas production in Benin metropolis and the second phase was determination of the amount of biogas obtainable from biodegradable waste. The results from the study showed that an average daily generation rate of 0.358kg per person per day (ppd.) of solid waste is generated in study area. Food waste accounted for about 78.49% of the generated solid waste representing 0.281kg per person per day (ppd.) and a total daily food waste generation of 305.075tonnes. Based on this value for food waste the obtainable biogas was estimated to be 28,836.91m3 of biogas in Benin metropolis per day. This volume of biogas can provide cooking gas for about 24,076.91 families per month in Benin metropolis or alternatively can be utilised to generate about 49.023MW of electricity per day.Keywords: Solid waste management, food waste, anaerobic digestion, biogas


Author(s):  
Rosana Sousa Bonfim ◽  
Poliana Moreira Lopes ◽  
Samuel Gonçalves de Araújo ◽  
Marília das Dores Genovez Furtado ◽  
Rafaela Ribeiro de Souza ◽  
...  

Abstract Allamanda puberula is a native species of the Caatinga biome with ornamental and landscaping potential. However, its potential is little explored due to the lack of information about the biology of its seeds and propagation. In this context, a study was carried out in order to characterize the seeds and their potential to produce seedlings in different containers. The experiments were divided into two phases. The first consisted in the characterization of fruits and seeds by evaluating the number of seeds per fruit, their dimensions (length and width), the weight of a thousand seeds, the number of seeds kg-¹, the degree of moisture, germination and emergence. The second phase consisted in the production of seedlings in a nursery, evaluating the growth over the days after sowing (DAS) (15, 30, 45 and 60 DAS) and the effect of the type of container (trays and tubes) for the formation of the seedlings. The species A. puberula has small seeds and a significant number of seeds per fruit. Apparently, there is no physical impediment or type of dormancy that impairs the germination process of the seeds. Seedlings grown in tubes were better in terms of growth and allocation of biomass. However, the indication of the best cultivation container for A. puberula propagated via seeds will depend on the implantation project and the specific characteristics of the field. The characterization of A. puberula seeds showed satisfactory physiological potential for germination and complete seedling formation in the nursery, enabling success in obtaining seedlings through seminiferous propagation.


Retrovirology ◽  
2014 ◽  
Vol 11 (1) ◽  
Author(s):  
Yali Qin ◽  
Heliang Shi ◽  
Saikat Banerjee ◽  
Aditi Agrawal ◽  
Marisa Banasik ◽  
...  

1987 ◽  
Vol 245 (3) ◽  
pp. 731-738 ◽  
Author(s):  
J M McWhirter ◽  
G W Gould ◽  
J M East ◽  
A G Lee

Homogenization of muscle gives a preparation of sealed vesicles derived from the sarcoplasmic reticulum. In the presence of ATP these vesicles will initially accumulate Ca2+ from the external medium and then spontaneously release this Ca2+ in two phases, an initial slow phase and a faster second phase. By measuring ATP concentrations in parallel with measurements of external Ca2+ concentrations we have shown that the second phase of release occurs when the added ATP has been exhausted, but that the first phase of release occurs in the presence of ATP. A similar pattern of uptake and release has been observed in the presence of acetyl phosphate, showing that ADP generated by ATP hydrolysis is not essential for the release process. The temperature-dependence of both phases of release is similar to the temperature-dependence of ATPase activity. Release is dependent on pH over the same pH range as affects binding of Ca2+ to the ATPase. Therefore we propose that Ca2+ release from vesicles of sarcoplasmic reticulum actively loaded with Ca2+ is mediated by the same Ca2+ + mg2+-activated ATPase as is responsible for uptake of Ca2+.


2001 ◽  
Vol 82 (1) ◽  
pp. 139-148 ◽  
Author(s):  
Nicola Berger ◽  
Astrid E. Heller ◽  
Klaus D. Störmann ◽  
Eberhard Pfaff

In order to investigate the functions of the three putative lentiviral integrase (IN) protein domains on viral DNA specificity and target site selection, enzymatically active chimeric enzymes were constructed using the three wild-type IN proteins of caprine arthritis–encephalitis virus (CAEV), maedi–visna virus (MVV) and human immunodeficiency virus type 1 (HIV-1). The chimeric enzymes were expressed in Escherichia coli, purified by affinity chromatography and analysed in vitro for IN-specific endonuclease and integration activities on various DNA substrates. Of the 21 purified chimeric IN proteins constructed, 20 showed distinct site-specific cleavage activity with at least one substrate and six were able to catalyse an efficient integration reaction. Analysis of the chimeric IN proteins revealed that the central domain together with the C terminus determines the activity and substrate specificity of the enzyme. The N terminus appears to have no considerable influence. Furthermore, an efficient integration activity of CAEV wild-type IN was successfully demonstrated after detailed characterization of the reaction conditions that support optimal enzyme activities of CAEV IN. Also, under the same in vitro assay conditions, MVV and HIV-1 IN proteins exhibited endonuclease and integration activities, an indispensable prerequisite of domain-swapping experiments. Thus, the following report presents a detailed characterization of the activities of CAEV IN in vitro as well as the analysis of functional chimeric lentiviral IN proteins.


Tick-borne encephalitis virus (TBEV) was isolated for the first time in Sweden in 1958 (from ticks and from 1 tick-borne encephalitis [TBE] patient).1 In 2003, Haglund and colleagues reported the isolation and antigenic and genetic characterization of 14 TBEV strains from Swedish patients (samples collected 1991–1994).2 The first serum sample, from which TBEV was isolated, was obtained 2–10 days after onset of disease and found to be negative for anti-TBEV immunoglobulin M (IgM) by enzyme-linked immunosorbent assay (ELISA), whereas TBEV-specific IgM (and TBEV-specific immunoglobulin G/cerebrospinal fluid [IgG/CSF] activity) was demonstrated in later serum samples taken during the second phase of the disease.


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