Introduction: A Framework for Biodiversity Studies

Author(s):  
James R. Gosz ◽  
Avi Perevolotsky

Biodiversity is regarded as a scientific concept, a measurable entity, as well as a social–political construct (Gaston 1996, Wilson 1993). The aim of this volume is to develop the scientific basis for biodiversity studies, and for the integration of the concept into management practice. We emphasize biodiversity as a powerful, integrative concept—one that requires careful articulation and further conceptualization before application. Diversity is a concept that refers to the range of variation or differences among a set of entities; biological diversity then refers to variety within the living world. An example of biological diversity is “species diversity,” which is commonly used to describe the number, variety, and variability of the assemblage of living organisms in a defined area or space. However, biodiversity as a concept has evolved. Current definitions expand the biological diversity concept to emphasize the multiple dimensions and ecological realms in which biodiversity can be observed. These definitions stress that biodiversity encompasses at least four kinds of diversities: genetic diversity, species or taxonomic diversity, ecosystem diversity, and landscape diversity (McAllister 1991; Solbrig 1993, Stuart and Adams 1991; Groombridge 1992; Heywood 1994, Wilson 1993). Two main problems emerge as a consequence of the broad scope that the biodiversity concept has taken at present. Cast as questions, the problems are: (1) How do we incorporate processes (e.g., foraging, energy and nutrient flows, patch dynamics) into a concept that is based on seemingly static entities (i.e., individual organisms, species, habitat types, patch types)? (2) How do we integrate across ecological subdisciplines (e.g., ecosystem, population, landscape ecology) and across scales that are involved in biodiversity studies? The two problems are not mutually exclusive. Indeed, they are inseparable and complementary. For example, to determine how species diversity and ecosystem processes interact requires incorporation of entities and processes, as well as integration of community and ecosystem ecology. The focus on both entities and processes reflects the long-recognized dichotomy of structure and function in biology and ecology. Clearly, both structure and function must be integrated in order to successfully solve ecological questions. Dealing with biodiversity brings this needed integration into focus.

2013 ◽  
pp. 1-32 ◽  
Author(s):  
Leszek Konieczny ◽  
Irena Roterman-Konieczna ◽  
Paweł Spólnik

Water ◽  
2021 ◽  
Vol 13 (22) ◽  
pp. 3155
Author(s):  
Shumin Liu ◽  
Fengbin Zhao ◽  
Xin Fang

Phytoplankton and bacterioplankton play a vital role in the structure and function of aquatic ecosystems, and their activity is closely linked to water eutrophication. However, few researchers have considered the temporal and spatial succession of phytoplankton and bacterioplankton, and their responses to environmental factors. The temporal and spatial succession of bacterioplankton and their ecological interaction with phytoplankton and water quality were analyzed using 16S rDNA high-throughput sequencing for their identification, and the functions of bacterioplankton were predicted. The results showed that the dominant classes of bacterioplankton in the Qingcaosha Reservoir were Gammaproteobacteria, Alphaproteobacteria, Actinomycetes, Acidimicrobiia, and Cyanobacteria. In addition, the Shannon diversity indexes were compared, and the results showed significant temporal differences based on monthly averaged value, although no significant spatial difference. The community structure was found to be mainly influenced by phytoplankton density and biomass, dissolved oxygen, and electrical conductivity. The presence of Pseudomonas and Legionella was positively correlated with that of Pseudanabaena sp., and Sphingomonas and Paragonimus with Melosira granulata. On the contrary, the presence of Planctomycetes was negatively correlated with Melosira granulata, as was Deinococcus-Thermus with Cyclotella sp. The relative abundance of denitrifying bacteria decreased from April to December, while the abundance of nitrogen-fixing bacteria increased. This study provides a scientific basis for understanding the ecological interactions between bacteria, algae, and water quality in reservoir ecosystems.


2006 ◽  
Vol 2 (3) ◽  
pp. 439-442 ◽  
Author(s):  
Gregory P Dietl ◽  
Jonathan R Hendricks

Biological asymmetries are important elements of the structure and function of many living organisms. Using the Plio–Pleistocene fossil record of crab predation on morphologically similar pairs of right- and left-handed snail species, we show here for the first time, contrary to traditional wisdom, that rare left-handed coiling promotes survival from attacks by right-handed crabs. This frequency-dependent result influences the balance of selection processes that maintain left-handedness at the species level and parallels some social interactions in human cultures, such as sports that involve dual contests between opponents of opposite handedness.


2015 ◽  
Vol 59 ◽  
pp. 43-69 ◽  
Author(s):  
Helen Watson

Biological membranes allow life as we know it to exist. They form cells and enable separation between the inside and outside of an organism, controlling by means of their selective permeability which substances enter and leave. By allowing gradients of ions to be created across them, membranes also enable living organisms to generate energy. In addition, they control the flow of messages between cells by sending, receiving and processing information in the form of chemical and electrical signals. This essay summarizes the structure and function of membranes and the proteins within them, and describes their role in trafficking and transport, and their involvement in health and disease. Techniques for studying membranes are also discussed.


EDIS ◽  
1969 ◽  
Vol 2003 (4) ◽  
Author(s):  
Center For Natural Resources

Biodiversity or biological diversity is a relatively new term in ecology. It became popular in the 1980s and is not yet properly understood by all non-ecologists. Biodiversity refers to the variety and richness among living organisms and the ecological systems and processes of which they are a part. There are three levels of biodiversity: habitat or ecosystem diversity, genetic diversity, and species diversity. This publication was produced by the Center for Natural Resources at the University of Florida. CNR 4 is part of a Program Summary Series. First published: September 2000. Minor revision: March 2003.  https://edis.ifas.ufl.edu/cr004


Molecules ◽  
2019 ◽  
Vol 24 (18) ◽  
pp. 3351 ◽  
Author(s):  
Jinkui Li ◽  
Lingya Zhang ◽  
Junwen Xiong ◽  
Xiyao Cheng ◽  
Yongqi Huang ◽  
...  

Polyamines are positively charged small molecules ubiquitously existing in all living organisms, and they are considered as one kind of the most ancient cellular components. The most common polyamines are spermidine, spermine, and their precursor putrescine generated from ornithine. Polyamines play critical roles in cells by stabilizing chromatin structure, regulating DNA replication, modulating gene expression, etc., and they also affect the structure and function of proteins. A few studies have investigated the impact of polyamines on protein structure and function previously, but no reports have focused on a protein-based biological module with a dedicated function. In this report, we investigated the impact of polyamines (putrescine, spermidine, and spermine) on the cyanobacterial KaiABC circadian oscillator. Using an established in vitro reconstitution system, we noticed that polyamines could disrupt the robustness of the KaiABC oscillator by inducing the denaturation of the Kai proteins (KaiA, KaiB, and KaiC). Further experiments showed that the denaturation was likely due to the induced change of the thermal stability of the clock proteins. Our study revealed an intriguing role of polyamines as a component in complex cellular environments and would be of great importance for elucidating the biological function of polyamines in future.


2015 ◽  
Vol 210 (1) ◽  
pp. 7-8 ◽  
Author(s):  
Wendy S. Garrett

Cell biology is the study of the structure and function of the unit or units of living organisms. Enabled by current and evolving technologies, cell biologists today are embracing new scientific challenges that span many disciplines. The eclectic nature of cell biology is core to its future and remains its enduring legacy.


Fine Focus ◽  
2017 ◽  
Vol 3 (1) ◽  
pp. 09-31
Author(s):  
Lei Wei ◽  
Rebecca J. Rubenstein ◽  
Kathleen M. Hanlon ◽  
Heidi Wade ◽  
Celeste N. Peterson ◽  
...  

The microorganisms that inhabit cheese contribute greatly to the flavor and development of the final product. While the rind and curd microbiota have been characterized separately, there is limited information on how the structure and function of microbial communities in rinds and curds vary within and amongst cheeses. To better understand the differences in community structure and function between communities of cheese rinds and curds, we combined culture-based methods with culture-independent community profiling of curds and rinds. Rinds contained greater taxonomic diversity than curds. Lactobacillales dominated curd communities while members from the order Actinomycetales were found in high abundance in rind communities. Communities varied more between rinds and curds than among cheeses produced from different milk types. To better understand microbial community functions, we cultured and assayed isolates for antibiotic susceptibility and carbon source utilization. Among European and U.S. cheeses, 70% of all susceptible isolates were cultured from U.S. cheeses. Overall, our study explored the differences within and between rind and curd microbial communities of natural rind cheeses, provided insights into the environmental factors that shape microbial communities, and demonstrated that at the community and isolate level the cheese microbiome was diverse and metabolically complex.


Sign in / Sign up

Export Citation Format

Share Document