scholarly journals First Report of Alternaria Brown Spot of Citrus Caused by Alternaria alternata in Peru

Plant Disease ◽  
2006 ◽  
Vol 90 (5) ◽  
pp. 686-686 ◽  
Author(s):  
J. E. Marín ◽  
H. S. Fernández ◽  
N. A. Peres ◽  
M. Andrew ◽  
T. L. Peever ◽  
...  

Alternaria brown spot, caused by Alternaria alternata (Fr.) Keissler, causes leaf, twig, and fruit lesions and reduces yield and fruit quality of many tangerines (Citrus reticulata Blanco) and their hybrids (3). In 2003, characteristic symptoms of brown spot were observed on young leaves and fruit of ‘Minneola’ tangelo in the Satipo Province of Peru. In 2004, the disease was discovered in the provinces of Chanchamayo, Leoncio Prado, and La Convención in the Junin, Huanuco, and Cusco regions, respectively, as well as in the Apurimac and the Ene valleys. In 2005, it was confirmed in the province of Oxapampa in the Pasco Region. Brown-to-black lesions surrounded by yellow halos and veinal necrosis were observed on young leaves, often causing abscission of young shoots and twig dieback. Light brown, circular lesions were observed on fruit, and when severe, resulted in premature abscission. Isolations from infected leaves and twigs were made on potato dextrose agar (PDA) with 10 μg/ml of benomyl. Colonies that developed after 5 days at 27°C were olive brown-to-black and produced small, muriform, pigmented conidia typical of A. alternata. On PDA without benomyl, gray colonies with conidia typical of Colletotrichum gloeosporioides were recovered frequently. Inoculation of three detached young shoots of ‘Minneola’ by spraying with a suspension of 105 conidia/ml of A. alternata produced leaf and twig symptoms characteristic of the disease after 48 h and confirmed pathogenicity of three isolates. Symptoms were not observed on control leaves sprayed with water nor on an equal number of leaves inoculated with a suspension of 105 conidia/ml of C. gloeosporioides. Reisolation of A. alternata from diseased tissue fulfilled Koch's postulates. DNA was extracted from 17 isolates and a partial endopolygalacturonase gene was amplified and sequenced (2). Sequences of all 17 isolates were identical, and in BLAST searches of the NCBI database, the closest matches were A. alternata accession nos. AY295023.1, AY295022.1, and AY295021.1 with 100, 99.8, and 99.8% sequence similarity, respectively. Phylogenetic analyses revealed that all isolates from Peru clustered with brown spot isolates from Israel, Turkey, South Africa, and Australia (1). These results, along with morphological characterization and pathogenicity tests, confirm the identity of the fungus as the tangerine pathotype of A. alternata. The disease has significantly reduced yield and the commercial value of fruit and may be a limiting factor for the production of susceptible cultivars in those areas of Peru. References: (1) T. L. Peever et al. Phytopathology 92:794, 2002. (2) T. L. Peever et al. Mycologia 96:119, 2004, (3) L.W. Timmer et al. Pages 19–21 in: Compendium of Citrus Diseases. 2nd ed. L. W. Timmer et al eds. The American Phytopathological Society, St. Paul, MN, 2000.

Plant Disease ◽  
2000 ◽  
Vol 84 (9) ◽  
pp. 1044-1044 ◽  
Author(s):  
A. Vicent ◽  
J. Armengol ◽  
R. Sales ◽  
J. García-Jiménez ◽  
F. Alfaro-Lassala

In 1998, a new disease of Fortune mandarin trees was detected in orchards in the eastern province of Valencia. This is one of the most important late-maturing cultivars grown in Spain. Symptoms were typical of Alternaria brown spot of citrus (2). Young leaves showed brown necrotic and irregular blighted areas with characteristic yellow halos. The necrosis had a tendency to follow the veins. On fruits, symptoms included light brown, slightly depressed spots to circular and dark brown areas on the external surface. Infected young fruits and leaves often fell and the mature fruits were unmarketable due to lesions, resulting in important economic losses. Isolations on potato dextrose agar supplemented with 0.5 mg/ml of streptomycin sulfate (PDAS) from affected leaves and fruits consistently yielded Alternaria alternata (Fr.:Fr.) Keissl., which was identified based on conidial morphological characteristics. Pathogenicity tests were conducted using 15 isolates from fruit and leaves by inoculating detached immature Fortune leaves with a sterile water suspension of 5 × 105 conidia per ml. Drops of this suspension (40 μl each) were placed on the lower surfaces of each leaflet using four leaves per isolate. Leaves were incubated in a moist chamber in the dark at 27°C (1). After 48 h, most of these isolates caused necrotic lesions on the leaves similar to those observed in the field, and the fungus was reisolated, confirming Koch's postulates. In 1999, the fungus spread to other citrus-growing areas, and to date the disease has been detected affecting Fortune and Nova mandarins and Minneola tangelo. This is the first report of Alternaria brown spot of citrus in Spain. References: (1) K. Kohmoto et al. Phytopathology 81:719, 1991. (2) J. O. Whiteside. Plant Dis. Rep. 60:326, 1976.


2020 ◽  
Vol 11 ◽  
pp. e3358
Author(s):  
Gabriela Da Costa ◽  
Maiara Curtolo ◽  
Thaís Cavichioli Magni ◽  
Mariângela Cristofani-Yaly

Citrus orchards have some limitations, such as the occurrence of phytosanitary problems. Alternaria brown spot (ABS) is caused by fungus Alternaria alternata, which affects several parts of the plant by producing a host-specific toxin, known as ACT. ABS is a limiting factor in orchards due to the susceptibility of most planted cultivars: ‘Murcott’ tangor and ‘Ponkan’ tangerine. The selection of varieties resistant/tolerant to the disease has economic importance. Therefore, the aim of this experiment was to evaluate the response to A. alternata inoculation in a population of ‘Murcott’ tangor vs ‘Pera’ sweet orange hybrids. Leaves of 2-3 centimeters in length of ‘Murcott’ tangor, ‘Pera’ sweet orange, ‘Ponkan’, ‘Dancy’, ‘Fremont’ tangerine and 198 hybrids were collected. For in vitro inoculation, monosporic A. alternata culture at concentration of 105 conidia mL-1 was used. Inoculated leaves were stored in humid chamber. After 24, 48 and 72 hours of inoculation, leaf lesions were evaluated following a diagrammatic scale. The results obtained showed that most hybrids from the crossing of ‘Murcott’ tangor vs ‘Pera’ sweet orange are susceptible to ABS. However, 44 are resistant and ten are tolerant. Among ABS-tolerant hybrids, some have phenotype similar to that of cultivated and commercialized hybrids.


Plants ◽  
2021 ◽  
Vol 10 (2) ◽  
pp. 218
Author(s):  
Chingchai Chaisiri ◽  
Xiang-Yu Liu ◽  
Wei-Xiao Yin ◽  
Chao-Xi Luo ◽  
Yang Lin

The Nanfengmiju (Citrus reticulata cv. Nanfengmiju), a high-quality local variety of mandarin, is one of the major fruit crops in Jiangxi Province, China. Citrus melanose and stem-end rot, two common fungal diseases of Nanfengmiju, are both caused by Diaporthe spp. (syn. Phomopsis spp.). Identification of the Diaporthe species is essential for epidemiological studies, quarantine measures, and management of diseases caused by these fungi. Melanose disease was observed on Nanfengmiju fruit in Jiangxi Province of China in 2016. Based on morphological characterization and multi-locus phylogenetic analyses, three out of 39 isolates from diseased samples were identified as D. passifloricola. Since these three isolates did not cause melanose on citrus fruit in the pathogenicity tests, they were presumed to be endophytic fungi present in the diseased tissues. However, our results indicate that D. passifloricola may persist as a symptom-less endophyte in the peel of citrus fruit, yet it may cause stem-end if it invades the stem end during fruit storage. To the best of our knowledge, this is the first report of D. passifloricola as the causal agent of the stem-end rot disease in Citrusreticulata cv. Nanfengmiju.


2000 ◽  
Vol 90 (7) ◽  
pp. 762-768 ◽  
Author(s):  
A. Masunaka ◽  
A. Tanaka ◽  
T. Tsuge ◽  
T. L. Peever ◽  
L. W. Timmer ◽  
...  

The tangerine pathotype of Alternaria alternata produces a host-selective toxin (HST), known as ACT-toxin, and causes Alternaria brown spot disease of citrus. The structure of ACT-toxin is closely related to AK- and AF-toxins, which are HSTs produced by the Japanese pear and strawberry pathotypes of A. alternata, respectively. AC-, AK-, and AF-toxins are chemically similar and share a 9,10-epoxy-8-hydroxy-9-methyl-decatrienoic acid moiety. Two genes controlling AK-toxin biosynthesis (AKT1 and AKT2) were recently cloned from the Japanese pear pathotype of A. alternata. Portions of these genes were used as heterologous probes in Southern blots, that detected homologs in 13 isolates of A. alternata tangerine pathotype from Minneola tangelo in Florida. Partial sequencing of the homologs in one of these isolates demonstrated high sequence similarity to AKT1 (89.8%) and to AKT2 (90.7%). AKT homologs were not detected in nine isolates of A. alternata from rough lemon, six isolates of nonpathogenic A. alternata, and one isolate of A. citri that causes citrus black rot. The presence of homologs in the Minneola isolates and not in the rough lemon isolates, nonpathogens or black rot isolates, correlates perfectly to pathogenicity on Iyo tangerine and ACT-toxin production. Functionality of the homologs was demonstrated by detection of transcripts using reverse transcription-polymerase chain reaction (RT-PCR) in total RNA of the tangerine pathotype of A. alternata. The high sequence similarity of AKT and AKT homologs in the tangerine patho-type, combined with the structural similarity of AK-toxin and ACT-toxin, may indicate that these homologs are involved in the biosynthesis of the decatrienoic acid moiety of ACT-toxin.


2010 ◽  
Vol 100 (2) ◽  
pp. 120-126 ◽  
Author(s):  
Naoya Ajiro ◽  
Yoko Miyamoto ◽  
Akira Masunaka ◽  
Takashi Tsuge ◽  
Mikihiro Yamamoto ◽  
...  

The tangerine pathotype of Alternaria alternata produces host-selective ACT-toxin and causes Alternaria brown spot disease of tangerines and tangerine hybrids. Sequence analysis of a genomic BAC clone identified a previously uncharacterized portion of the ACT-toxin biosynthesis gene cluster (ACTT). A 1,034-bp gene encoding a putative enoyl-reductase was identified by using rapid amplification of cDNA ends and polymerase chain reaction and designated ACTTS2. Genomic Southern blots demonstrated that ACTTS2 is present only in ACT-toxin producers and is carried on a 1.9 Mb conditionally dispensable chromosome by the tangerine pathotype. Targeted gene disruption of ACTTS2 led to a reduction in ACT-toxin production and pathogenicity, and transcriptional knockdown of ACTTS2 using RNA silencing resulted in complete loss of ACT-toxin production and pathogenicity. These results indicate that ACTTS2 is an essential gene for ACT-toxin biosynthesis in the tangerine pathotype of A. alternata and is required for pathogenicity of this fungus.


Plant Disease ◽  
2015 ◽  
Vol 99 (2) ◽  
pp. 231-239 ◽  
Author(s):  
Byron Vega ◽  
Megan M. Dewdney

Boscalid, a succinate dehydrogenase inhibitor (SDHI), was registered in 2011 to control Alternaria brown spot (ABS) of citrus, caused by Alternaria alternata. In this study, the effect of boscalid on mycelial growth, conidial germination, and resazurin reduction was established in a subset of 16 sensitive isolates using three different media. Conidial germination and mycelial growth inhibition were not suppressed even at higher concentrations of boscalid, although effective concentration to inhibit 50% growth (EC50) values were established with each method. Resazurin reduction produced the lowest EC50 values and was selected for further sensitivity tests. In total, 419 isolates, never exposed to boscalid and collected from Florida tangerine orchards between 1996 to 2012, were tested for boscalid sensitivity. The sensitivity distribution was a unimodal curve with a mean EC50 value of 0.60 μg/ml and a range of 0.07 to 5.84 μg/ml. The molecular characterization of the succinate dehydrogenase (SDH) genes were also determined in a subset of 15 isolates, exhibiting great variability in boscalid sensitivity, by cloning and sequencing the sdhB, sdhC, and sdhD genes. Sequence comparisons of the SDH complex revealed the presence of mutations in 14 of 15 isolates. In total, 21 mutations were identified. Double and multiple mutations were observed in SDHC and SDHD, respectively. In SDHB, 4 mutations were observed while, in SDHC and SDHD, 5 and 12 mutations were detected, respectively. No mutations were found in the highly conserved histidine residues at positions 277 in SDHB, 134 in SDHC, and 133 in SDHD, typically observed in SDHI-resistant isolates. Our findings suggest that A. alternata populations from Florida are sensitive to boscalid and it could be used in ABS spray programs. Boscalid resistance is currently not a problem, although further monitoring for resistance is advisable.


Plant Disease ◽  
2007 ◽  
Vol 91 (12) ◽  
pp. 1600-1606 ◽  
Author(s):  
S. N. Mondal ◽  
A. Vicent ◽  
R. F. Reis ◽  
L. W. Timmer

In greenhouse trials, copper hydroxide, pyraclostrobin, and famoxadone were applied to actively growing young citrus seedlings to determine the duration of protection of young leaves provided by these fungicides against melanose, caused by Diaporthe citri, citrus scab, caused by Elsinoe fawcettii, and Alternaria brown spot, caused by Alternaria alternata. Fungicides were applied to different sets of potted plants of grapefruit for control of melanose, of rough lemon for control of scab, and of Dancy tangerine for control of Alternaria brown spot 1 to 6 days prior to inoculation, as well as on the day of inoculation. Leaf area of treated shoots was estimated on the day of fungicide application and the day of inoculation and disease severity evaluated subsequently. In most cases, copper hydroxide and famoxadone provided at least 50% control of all three diseases for only about 2 days after application. Generally, there was little or no disease control when the products were applied 4 or more days before inoculation. In contrast, pyraclostrobin usually provided a high level of control of all three diseases when applied up to 5 days prior to inoculation. The level of disease control decreased as the interval between a fungicide application and inoculation increased and the relationship between disease control and leaf expansion best fit a quadratic equation. Effective disease control was observed with copper hydroxide and famoxadone until leaf area had increased by 100 to 200%, whereas control with pyraclostrobin was observed up to 400 to 500% increase in leaf area. In postinoculation tests with scab and melanose, pyraclostrobin provided high levels of disease control (>75%) when applied up to 2 days after inoculation, whereas copper hydroxide and famoxadone had minimal postinoculation activity. Applications of pyraclostrobin to the spring flush growth of citrus trees are much more likely to provide control of melanose, scab, and Alternaria brown spot than those of famoxadone or copper hydroxide.


Author(s):  
Yunpeng Gai ◽  
Haijie Ma ◽  
Yanan Chen ◽  
Lei Li ◽  
Yingze Cao ◽  
...  

Alternaria brown spot (ABS) caused by Alternaria alternata is an economically important fungal disease of citrus worldwide. The ABS pathogen A. alternata tangerine pathotype can produce a host-specific ACT toxin, which is regulated by ACT toxin gene cluster located in the conditionally dispensable chromosome (CDC). Previously, we have assembled a draft genome of A. alternata tangerine pathotype strain Z7, which comprises 165 contigs. In this study, we report a chromosome-level genome assembly of A. alternata Z7 through the combination of Oxford nanopore sequencing and Illumina sequencing technologies. The assembly of A. alternata Z7 had a total size of 34.28 Mb, with a GC content of 51.01% and contig N50 of Mb. The genome is encompassed 12067 protein-coding genes, 34 rRNAs, and 107 tRNAs. Interestingly, A. alternata Z7 is composed of 10 essential chromosomes (ECs) and 2 conditionally dispensable chromosomes (CDCs), which is consistent with the experimental evidences of pulsed-field gel electrophoresis (PFGE). To our best knowledge, this is the first chromosome-level genome assembly of A. alternata. In addition, a database for citrus-related Alternaria genomes has been established to provide public resources for the sequences, annotation and comparative genomics data of Alternaria species. The improved genome sequence and annotation at the chromosome level is a significant step toward a better understanding of the pathogenicity of A. alternata. The database will be updated regularly whenever the genomes of newly isolated Alternaria species are available. The citrus-related Alternaria genomes database is open accessible through http://www.zjudata.com/alternaria/blast.php.


Plant Disease ◽  
2010 ◽  
Vol 94 (3) ◽  
pp. 375-375 ◽  
Author(s):  
X. F. Wang ◽  
Z. A. Li ◽  
K. Z. Tang ◽  
C. Y. Zhou ◽  
L. Yi

Brown spot of citrus is considered a major problem on the fruit of many citrus cultivars grown for fresh markets including tangerines (Citrus reticulata) and their hybrids. It causes lesions on leaves, stems, and fruit and reduces yield and fruit quality (2). In 2003 in southern Wenshan Municipality, Yunnan Province in China, sporadic occurrence of Alternaria brown spot was observed on Tangfang mandarin, a local citrus cultivar identified preliminarily as a kind of mandarin hybrid. From 2006 to 2008, nearly 80% of local orchards were infected with the disease. Fruit symptoms typical of Alternaria brown spot ranging from light brown, slightly depressed spots to circular and dark brown areas were observed. Leaves showed small, brown, circular spots and irregular blighted areas with characteristic yellow halos. Tissues from the margin of fruit spots or infected leaf parts of eight different trees were surface sterilized in 1.5% sodium hypochlorite for 1 min, plated on potato dextrose agar (PDA), and then incubated at 27°C in the dark for 1 week. Dark brown mycelia and pigmented septate conidia with lengths of 10 to 35 μm and widths of 5 to 13 μm were produced. On the basis of conidial morphological characteristics, the pathogen was identified as Alternaria alternata (Fr.:Fr.) Keissl (1). Detached young healthy leaves of ‘Minneola’ tangelo (C. reticulata × C. paradisi) were sprayed with a conidial suspension of 105 conidia per ml and incubated in a moist chamber at 27°C. A control treatment with an equal number of leaves was sprayed with distilled water only. After 48 h, seven of these isolates caused necrotic lesions on detached leaves, characteristic of the disease, whereas there were no symptoms on leaves of the water control. Pure cultures were recovered on PDA from symptomatic tissues and the morphological characteristics of the conidia closely fit the description of A. alternata, confirming Koch's postulates. Currently, the distribution of Alternaria brown spot of citrus is confined to southern Wenshan Municipality in Yunnan Province where it is a serious disease problem on the most important commercial cultivar in this region. The identification of the pathogen now allows for appropriate field management and control measures. To our knowledge, this is the first report of Alternaria brown spot of citrus in China. References: (1) Z. Solel. Plant Pathol. 40:145, 1991. (2) J. O. Whiteside. Plant Dis. Rep. 60:326, 1976.


Plant Disease ◽  
2003 ◽  
Vol 87 (9) ◽  
pp. 1089-1093 ◽  
Author(s):  
Alka Bhatia ◽  
P. D. Roberts ◽  
L. W. Timmer

Alternaria brown spot, caused by Alternaria alternata, results in serious yield losses of tangerines and their hybrids in Florida. The Alter-Rater model predicts the need for fungicide applications based on daily cumulative points that are assigned on the basis of rainfall, leaf wetness, and temperature. Previously, Alter-Rater threshold or trigger values of 50, 75, 100, and 150 points for application of copper fungicides were suggested for groves with different cultivars and disease histories. In this study, we evaluated thresholds of 50, 100, and 150 points in four Minneola tangelo and Murcott tangor groves in 2000 and 2001. For comparison, copper fungicides were applied according to the DISC Copper Model in 2000 and according to calendar sprays in 2001. Use of the Alter-Rater model resulted in fewer sprays in three of the four groves in 2000 and better fruit quality in the other grove than the Copper Model. Compared to a calendar spray schedule in 2001, use of the Alter-Rater model resulted in fewer sprays in two of the four groves but more sprays in one grove. The results confirmed that the Alter-Rater is a valuable tool for timing fungicide applications and that its use results in better disease control or fewer sprays.


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