scholarly journals Causal coupling between neural activity, metabolism, and behavior across the Drosophila brain

2020 ◽  
Author(s):  
Kevin Mann ◽  
Stephane Deny ◽  
Surya Ganguli ◽  
Thomas R. Clandinin
Keyword(s):  
Energy Metabolism ◽  
Neural Activity ◽  
Large Scale ◽  
Metabolic Flux ◽  
Fruit Fly ◽  
Brain Network ◽  
Network Activity ◽  
Tight Coupling ◽  
Behavioral States ◽  
The Brain

Coordinated activity across networks of neurons is a hallmark of both resting and active behavioral states in many species, including worms, flies, fish, mice and humans1–5. These global patterns alter energy metabolism in the brain over seconds to hours, making oxygen consumption and glucose uptake widely used proxies of neural activity6,7. However, whether changes in neural activity are causally related to changes in metabolic flux in intact circuits on the sub-second timescales associated with behavior, is unknown. Moreover, it is unclear whether transitions between rest and action are associated with spatiotemporally structured changes in neuronal energy metabolism. Here, we combine two-photon microscopy of the entire fruit fly brain with sensors that allow simultaneous measurements of neural activity and metabolic flux, across both resting and active behavioral states. We demonstrate that neural activity drives changes in metabolic flux, creating a tight coupling between these signals that can be measured across large-scale brain networks. Further, these studies reveal that the initiation of even minimal behavioral movements causes large-scale changes in the pattern of neural activity and energy metabolism, revealing unexpected structure in the functional architecture of the brain. The relationship between neural activity and energy metabolism is likely evolutionarily ancient. Thus, these studies provide a critical foundation for using metabolic proxies to capture changes in neural activity and reveal that even minimal behavioral movements are associated with changes in large-scale brain network activity.

A new method to predict anomaly in brain network based on graph deep learning

2020 ◽  
Vol 31 (6) ◽  
pp. 681-689
Author(s):  
Jalal Mirakhorli ◽  
Hamidreza Amindavar ◽  
Mojgan Mirakhorli
Keyword(s):  
Deep Learning ◽  
Large Scale ◽  
Brain Plasticity ◽  
Brain Network ◽  
High Order ◽  
Brain Diseases ◽  
Simultaneous Occurrence ◽  
Generative Adversarial Network ◽  
The Brain ◽  
Brain Connections

AbstractFunctional magnetic resonance imaging a neuroimaging technique which is used in brain disorders and dysfunction studies, has been improved in recent years by mapping the topology of the brain connections, named connectopic mapping. Based on the fact that healthy and unhealthy brain regions and functions differ slightly, studying the complex topology of the functional and structural networks in the human brain is too complicated considering the growth of evaluation measures. One of the applications of irregular graph deep learning is to analyze the human cognitive functions related to the gene expression and related distributed spatial patterns. Since a variety of brain solutions can be dynamically held in the neuronal networks of the brain with different activity patterns and functional connectivity, both node-centric and graph-centric tasks are involved in this application. In this study, we used an individual generative model and high order graph analysis for the region of interest recognition areas of the brain with abnormal connection during performing certain tasks and resting-state or decompose irregular observations. Accordingly, a high order framework of Variational Graph Autoencoder with a Gaussian distributer was proposed in the paper to analyze the functional data in brain imaging studies in which Generative Adversarial Network is employed for optimizing the latent space in the process of learning strong non-rigid graphs among large scale data. Furthermore, the possible modes of correlations were distinguished in abnormal brain connections. Our goal was to find the degree of correlation between the affected regions and their simultaneous occurrence over time. We can take advantage of this to diagnose brain diseases or show the ability of the nervous system to modify brain topology at all angles and brain plasticity according to input stimuli. In this study, we particularly focused on Alzheimer’s disease.

scholarly journals Energy constraints on brain network formation

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Kosuke Takagi
Keyword(s):  
Network Formation ◽  
Cost Minimization ◽  
Brain Network ◽  
Network Activity ◽  
Rich Functionality ◽  
Energy Constraints ◽  
Dependent Form ◽  
Statistical Similarity ◽  
Simple Ratio ◽  
The Brain

AbstractEnergy constraints are a fundamental limitation of the brain, which is physically embedded in a restricted space. The collective dynamics of neurons through connections enable the brain to achieve rich functionality, but building connections and maintaining activity come at a high cost. The effects of reducing these costs can be found in the characteristic structures of the brain network. Nevertheless, the mechanism by which energy constraints affect the organization and formation of the neuronal network in the brain is unclear. Here, it is shown that a simple model based on cost minimization can reproduce structures characteristic of the brain network. With reference to the behavior of neurons in real brains, the cost function was introduced in an activity-dependent form correlating the activity cost and the wiring cost as a simple ratio. Cost reduction of this ratio resulted in strengthening connections, especially at highly activated nodes, and induced the formation of large clusters. Regarding these network features, statistical similarity was confirmed by comparison to connectome datasets from various real brains. The findings indicate that these networks share an efficient structure maintained with low costs, both for activity and for wiring. These results imply the crucial role of energy constraints in regulating the network activity and structure of the brain.

scholarly journals Amplification and Suppression of Distinct Brain-wide Activity Patterns by Catecholamines

2018 ◽  
Author(s):  
RL van den Brink ◽  
S Nieuwenhuis ◽  
TH Donner
Keyword(s):  
Spatial Distribution ◽  
Human Brain ◽  
Spatial Patterns ◽  
Large Scale ◽  
Network Dynamics ◽  
Brain Network ◽  
Heterogeneous Distribution ◽  
Neurotransmitter Systems ◽  
The Brain ◽  
Catecholamine Levels

ABSTRACTThe widely projecting catecholaminergic (norepinephrine and dopamine) neurotransmitter systems profoundly shape the state of neuronal networks in the forebrain. Current models posit that the effects of catecholaminergic modulation on network dynamics are homogenous across the brain. However, the brain is equipped with a variety of catecholamine receptors with distinct functional effects and heterogeneous density across brain regions. Consequently, catecholaminergic effects on brain-wide network dynamics might be more spatially specific than assumed. We tested this idea through the analysis of functional magnetic resonance imaging (fMRI) measurements performed in humans (19 females, 5 males) at ‘rest’ under pharmacological (atomoxetine-induced) elevation of catecholamine levels. We used a linear decomposition technique to identify spatial patterns of correlated fMRI signal fluctuations that were either increased or decreased by atomoxetine. This yielded two distinct spatial patterns, each expressing reliable and specific drug effects. The spatial structure of both fluctuation patterns resembled the spatial distribution of the expression of catecholamine receptor genes: α1 norepinephrine receptors (for the fluctuation pattern: placebo > atomoxetine), ‘D2-like’ dopamine receptors (pattern: atomoxetine > placebo), and β norepinephrine receptors (for both patterns, with correlations of opposite sign). We conclude that catecholaminergic effects on the forebrain are spatially more structured than traditionally assumed and at least in part explained by the heterogeneous distribution of various catecholamine receptors. Our findings link catecholaminergic effects on large-scale brain networks to low-level characteristics of the underlying neurotransmitter systems. They also provide key constraints for the development of realistic models of neuromodulatory effects on large-scale brain network dynamics.SIGNIFICANCE STATEMENTThe catecholamines norepinephrine and dopamine are an important class of modulatory neurotransmitters. Because of the widespread and diffuse release of these neuromodulators, it has commonly been assumed that their effects on neural interactions are homogenous across the brain. Here, we present results from the human brain that challenge this view. We pharmacologically increased catecholamine levels and imaged the effects on the spontaneous covariations between brain-wide fMRI signals at ‘rest’. We identified two distinct spatial patterns of covariations: one that was amplified and another that was suppressed by catecholamines. Each pattern was associated with the heterogeneous spatial distribution of the expression of distinct catecholamine receptor genes. Our results provide novel insights into the catecholaminergic modulation of large-scale human brain dynamics.

Large-scale plastic changes of the brain network in an animal model of neuropathic pain

NeuroImage ◽  
2014 ◽  
Vol 98 ◽  
pp. 203-215 ◽  
Author(s):  
Chang-Eop Kim ◽  
Yu Kyeong Kim ◽  
Geehoon Chung ◽  
Jae Min Jeong ◽  
Dong Soo Lee ◽  
...  
Keyword(s):  
Animal Model ◽  
Neuropathic Pain ◽  
Large Scale ◽  
Brain Network ◽  
Plastic Changes ◽  
The Brain

scholarly journals Brain network dynamics are hierarchically organized in time

2017 ◽  
Vol 114 (48) ◽  
pp. 12827-12832 ◽  
Author(s):  
Diego Vidaurre ◽  
Stephen M. Smith ◽  
Mark W. Woolrich
Keyword(s):  
Large Scale ◽  
Temporal Dynamics ◽  
Brain Network ◽  
Specific Measure ◽  
Brain Areas ◽  
Neuronal Populations ◽  
Subject Specific ◽  
Large Scale Networks ◽  
Network Patterns ◽  
The Brain

The brain recruits neuronal populations in a temporally coordinated manner in task and at rest. However, the extent to which large-scale networks exhibit their own organized temporal dynamics is unclear. We use an approach designed to find repeating network patterns in whole-brain resting fMRI data, where networks are defined as graphs of interacting brain areas. We find that the transitions between networks are nonrandom, with certain networks more likely to occur after others. Further, this nonrandom sequencing is itself hierarchically organized, revealing two distinct sets of networks, or metastates, that the brain has a tendency to cycle within. One metastate is associated with sensory and motor regions, and the other involves areas related to higher order cognition. Moreover, we find that the proportion of time that a subject spends in each brain network and metastate is a consistent subject-specific measure, is heritable, and shows a significant relationship with cognitive traits.

scholarly journals Loss of integration of brain networks after sleep deprivation relates to the worsening of cognitive functions

2020 ◽  
Author(s):  
Pesoli Matteo ◽  
Rucco Rosaria ◽  
Liparoti Marianna ◽  
Lardone Anna ◽  
D’Aurizio Giula ◽  
...  
Keyword(s):  
Sleep Deprivation ◽  
Resting State ◽  
Large Scale ◽  
Brain Networks ◽  
Brain Network ◽  
Cognitive Tasks ◽  
Functional Networks ◽  
Long Sleep ◽  
Before And After ◽  
The Brain

AbstractThe topology of brain networks changes according to environmental demands and can be described within the framework of graph theory. We hypothesized that 24-hours long sleep deprivation (SD) causes functional rearrangements of the brain topology so as to impair optimal communication, and that such rearrangements relate to the performance in specific cognitive tasks, namely the ones specifically requiring attention. Thirty-two young men underwent resting-state MEG recording and assessments of attention and switching abilities before and after SD. We found loss of integration of brain network and a worsening of attention but not of switching abilities. These results show that brain network changes due to SD affect switching abilities, worsened attention and induce large-scale rearrangements in the functional networks.

scholarly journals Global connectivity of the frontoparietal cognitive control network is related to depression symptoms in the general population

2017 ◽  
Author(s):  
Douglas H. Schultz ◽  
Takuya Ito ◽  
Levi I. Solomyak ◽  
Richard H. Chen ◽  
Ravi D. Mill ◽  
...  
Keyword(s):  
Mental Health ◽  
Cognitive Control ◽  
Large Scale ◽  
Brain Network ◽  
Depression Symptoms ◽  
Control Network ◽  
Mental Health Symptoms ◽  
Health Symptoms ◽  
Cognitive Control Network ◽  
The Brain

ABSTRACTWe all vary in our mental health, even among people not meeting diagnostic criteria for mental illness. Understanding this individual variability may reveal factors driving the risk for mental illness, as well as factors driving sub-clinical problems that still adversely affect quality of life. To better understand the large-scale brain network mechanisms underlying this variability we examined the relationship between mental health symptoms and resting-state functional connectivity patterns in cognitive control systems. One such system is the frontoparietal cognitive control network (FPN). Changes in FPN connectivity may impact mental health by disrupting the ability to regulate symptoms in a goal-directed manner. Here we test the hypothesis that FPN dysconnectivity relates to mental health symptoms even among individuals who do not meet formal diagnostic criteria but may exhibit meaningful symptom variation. We found that depression symptoms severity negatively correlated with between-network global connectivity (BGC) of the FPN. This suggests that decreased connectivity between the FPN and the rest of the brain is related to increased depression symptoms in the general population. These findings complement previous clinical studies to support the hypothesis that global FPN connectivity contributes to the regulation of mental health symptoms across both health and disease.AUTHOR SUMMARYUnderstanding how large-scale network interactions in the brain contribute to (or serve a protective role against) mental health symptoms is an important step toward developing more effective mental health treatments. Here we test the hypothesis that cognitive control networks play an important role in mental health by being highly connected to other brain networks and able to serve as a feedback mechanism capable of regulating symptoms in a goal-directed manner. We found that the more well-connected the frontoparietal cognitive control network was to other networks in the brain the less depression symptoms were reported by participants. These results contribute to our understanding of how brain network interactions are related to mental health symptoms, even in individuals who have not been diagnosed with a disorder.

scholarly journals Synthesizing Brain-network-inspired Interconnections for Large-scale Network-on-chips

2022 ◽  
Vol 27 (1) ◽  
pp. 1-30
Author(s):  
Mengke Ge ◽  
Xiaobing Ni ◽  
Xu Qi ◽  
Song Chen ◽  
Jinglei Huang ◽  
...  
Keyword(s):  
Large Scale ◽  
Small World ◽  
Brain Network ◽  
Graph Processing ◽  
Hop Count ◽  
Scale Free ◽  
Large Scale Network ◽  
Average Latency ◽  
Scale Network ◽  
The Brain

Brain network is a large-scale complex network with scale-free, small-world, and modularity properties, which largely supports this high-efficiency massive system. In this article, we propose to synthesize brain-network-inspired interconnections for large-scale network-on-chips. First, we propose a method to generate brain-network-inspired topologies with limited scale-free and power-law small-world properties, which have a low total link length and extremely low average hop count approximately proportional to the logarithm of the network size. In addition, given the large-scale applications, considering the modularity of the brain-network-inspired topologies, we present an application mapping method, including task mapping and deterministic deadlock-free routing, to minimize the power consumption and hop count. Finally, a cycle-accurate simulator BookSim2 is used to validate the architecture performance with different synthetic traffic patterns and large-scale test cases, including real-world communication networks for the graph processing application. Experiments show that, compared with other topologies and methods, the brain-network-inspired network-on-chips (NoCs) generated by the proposed method present significantly lower average hop count and lower average latency. Especially in graph processing applications with a power-law and tightly coupled inter-core communication, the brain-network-inspired NoC has up to 70% lower average hop count and 75% lower average latency than mesh-based NoCs.

scholarly journals Large-scale brain networks and Freudian ego

2019 ◽  
Vol 12 (2) ◽  
pp. 162-175 ◽  
Author(s):  
Petar Radoev Dimkov
Keyword(s):  
Sigmund Freud ◽  
Default Mode Network ◽  
Large Scale ◽  
Structural Model ◽  
Brain Network ◽  
Default Mode ◽  
Current Thinking ◽  
Theoretical Hypothesis ◽  
Brain Correlates ◽  
The Brain

Sigmund Freud, the founder of psychoanalysis, is predominantly known for his conception of the id, ego and super-ego, representing a part of his meta-psychology of the psychic apparatus. Nowadays, with the advancements in technology and science, his meta-psychological structural model of the psyche might be either confirmed or denied by comparing the account of the psychic apparatus of the classical psychoanalysis to the newest findings in neuropsychology and cognitive neuroscience. Indeed, the founded interdisciplinary project of neuro-psychoanalysis strives to answer such questions. In this article, the current thinking on the discussions around Freudian ego and its possible brain correlates is presented. In 2010, Robin Carhart-Harris and Karl Friston introduced a neuro-psychoanalytic account of the psychic apparatus, where the ego correlated with a large-scale brain network called the default-mode network. In the end of this paper, an original theoretical hypothesis is offered, supplemented with review of the literature, namely that the central-executive network and the salience network are viewed as the true representatives of Freudian ego. The offered hypothesis criticizes Carhart-Harris and Friston’s postulating of the default-mode network as being the brain representative of Freudian ego.

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