scholarly journals Incorporating the Laplacian Filter with a Three-Stream Multi-Channel Convolutional Neural Network for Improved Abnormality Detection in Knee MRIs

Author(s):  
Rahul Kumar ◽  
Rohan Bhansali

AbstractDespite ACL and meniscus tears being among the most common movement induced injuries, they are often the most difficult to diagnose due to the variable severity with which these tears occur. Typically, magnetic resonance imaging (MRI) scans are used for diagnosing ligament tears, but performing and analyzing these scans is time consuming and expensive due to the necessitation of a radiologist or professional orthopedic specialist. Consequently, we developed a custom three-stream convolutional neural network (CNN) architecture that contains multiple channels to automate the diagnosis of ACL and meniscus tears from MRI scans. Our algorithm utilizes the sagittal, coronal, and axial slices to maximize feature extraction. Furthermore, we apply the Laplace Operator on the MRI scan images to evaluate and compare its propensity in different medical imaging modalities. The algorithm attained an accuracy of 92.80%, significantly higher than that of orthopedic diagnosis accuracy. Our results point towards the feasibility of shallow, multi-channel CNNs and the ability of the Laplace Operator to improve performance metrics for MRI scan diagnosis.

Diagnostics ◽  
2020 ◽  
Vol 10 (6) ◽  
pp. 402
Author(s):  
Sabyasachi Chakraborty ◽  
Satyabrata Aich ◽  
Hee-Cheol Kim

Parkinson’s Disease is a neurodegenerative disease that affects the aging population and is caused by a progressive loss of dopaminergic neurons in the substantia nigra pars compacta (SNc). With the onset of the disease, the patients suffer from mobility disorders such as tremors, bradykinesia, impairment of posture and balance, etc., and it progressively worsens in the due course of time. Additionally, as there is an exponential growth of the aging population in the world the number of people suffering from Parkinson’s Disease is increasing and it levies a huge economic burden on governments. However, until now no therapeutic method has been discovered for completely eradicating the disease from a person’s body after it’s onset. Therefore, the early detection of Parkinson’s Disease is of paramount importance to tackle the progressive loss of dopaminergic neurons in patients to serve them with a better life. In this study, 3T T1-weighted MRI scans were acquired from the Parkinson’s Progression Markers Initiative (PPMI) database of 406 subjects from baseline visit, where 203 were healthy and 203 were suffering from Parkinson’s Disease. Following data pre-processing, a 3D convolutional neural network (CNN) architecture was developed for learning the intricate patterns in the Magnetic Resonance Imaging (MRI) scans for the detection of Parkinson’s Disease. In the end, it was observed that the developed 3D CNN model performed superiorly by completely aligning with the hypothesis of the study and plotted an overall accuracy of 95.29%, average recall of 0.943, average precision of 0.927, average specificity of 0.9430, f1-score of 0.936, and Receiver Operating Characteristic—Area Under Curve (ROC-AUC) score of 0.98 for both the classes respectively.


2021 ◽  
Author(s):  
Daniel J Delbarre ◽  
Luis Santos ◽  
Habib Ganjgahi ◽  
Neil Horner ◽  
Aaron McCoy ◽  
...  

Large scale neuroimaging datasets present unique challenges for automated processing pipelines. Motivated by a large-scale clinical trials dataset of Multiple Sclerosis (MS) with over 235,000 magnetic resonance imaging (MRI) scans, we consider the challenge of defacing - anonymisation to remove identifying features on the face and the ears. The defacing process must undergo quality control (QC) checks to ensure that the facial features have been adequately anonymised and that the brain tissue is left completely intact. Visual QC checks - particularly on a project of this scale - are time-consuming and can cause delays in preparing data for research. In this study, we have developed a convolutional neural network (CNN) that can assist with the QC of MRI defacing. Our CNN is able to distinguish between scans that are correctly defaced, and three sub-types of failures with high test accuracy (77\%). Through applying visualisation techniques, we are able to verify that the CNN uses the same anatomical features as human scorers when selecting classifications. Due to the sensitive nature of the data, strict thresholds are applied so that only classifications with high confidence are accepted, and scans that are passed by the CNN undergo a time-efficient verification check. Integration of the network into the anonymisation pipeline has led to nearly half of all scans being classified by the CNN, resulting in a considerable reduction in the amount of time needed for manual QC checks, while maintaining high QC standards to protect patient identities.


2021 ◽  
Vol 11 (14) ◽  
pp. 6594
Author(s):  
Yu-Chia Hsu

The interdisciplinary nature of sports and the presence of various systemic and non-systemic factors introduce challenges in predicting sports match outcomes using a single disciplinary approach. In contrast to previous studies that use sports performance metrics and statistical models, this study is the first to apply a deep learning approach in financial time series modeling to predict sports match outcomes. The proposed approach has two main components: a convolutional neural network (CNN) classifier for implicit pattern recognition and a logistic regression model for match outcome judgment. First, the raw data used in the prediction are derived from the betting market odds and actual scores of each game, which are transformed into sports candlesticks. Second, CNN is used to classify the candlesticks time series on a graphical basis. To this end, the original 1D time series are encoded into 2D matrix images using Gramian angular field and are then fed into the CNN classifier. In this way, the winning probability of each matchup team can be derived based on historically implied behavioral patterns. Third, to further consider the differences between strong and weak teams, the CNN classifier adjusts the probability of winning the match by using the logistic regression model and then makes a final judgment regarding the match outcome. We empirically test this approach using 18,944 National Football League game data spanning 32 years and find that using the individual historical data of each team in the CNN classifier for pattern recognition is better than using the data of all teams. The CNN in conjunction with the logistic regression judgment model outperforms the CNN in conjunction with SVM, Naïve Bayes, Adaboost, J48, and random forest, and its accuracy surpasses that of betting market prediction.


2018 ◽  
Vol 4 (9) ◽  
pp. 107 ◽  
Author(s):  
Mohib Ullah ◽  
Ahmed Mohammed ◽  
Faouzi Alaya Cheikh

Articulation modeling, feature extraction, and classification are the important components of pedestrian segmentation. Usually, these components are modeled independently from each other and then combined in a sequential way. However, this approach is prone to poor segmentation if any individual component is weakly designed. To cope with this problem, we proposed a spatio-temporal convolutional neural network named PedNet which exploits temporal information for spatial segmentation. The backbone of the PedNet consists of an encoder–decoder network for downsampling and upsampling the feature maps, respectively. The input to the network is a set of three frames and the output is a binary mask of the segmented regions in the middle frame. Irrespective of classical deep models where the convolution layers are followed by a fully connected layer for classification, PedNet is a Fully Convolutional Network (FCN). It is trained end-to-end and the segmentation is achieved without the need of any pre- or post-processing. The main characteristic of PedNet is its unique design where it performs segmentation on a frame-by-frame basis but it uses the temporal information from the previous and the future frame for segmenting the pedestrian in the current frame. Moreover, to combine the low-level features with the high-level semantic information learned by the deeper layers, we used long-skip connections from the encoder to decoder network and concatenate the output of low-level layers with the higher level layers. This approach helps to get segmentation map with sharp boundaries. To show the potential benefits of temporal information, we also visualized different layers of the network. The visualization showed that the network learned different information from the consecutive frames and then combined the information optimally to segment the middle frame. We evaluated our approach on eight challenging datasets where humans are involved in different activities with severe articulation (football, road crossing, surveillance). The most common CamVid dataset which is used for calculating the performance of the segmentation algorithm is evaluated against seven state-of-the-art methods. The performance is shown on precision/recall, F 1 , F 2 , and mIoU. The qualitative and quantitative results show that PedNet achieves promising results against state-of-the-art methods with substantial improvement in terms of all the performance metrics.


This paper presents brain tumor detection and segmentation using image processing techniques. Convolutional neural networks can be applied for medical research in brain tumor analysis. The tumor in the MRI scans is segmented using the K-means clustering algorithm which is applied of every scan and the feed it to the convolutional neural network for training and testing. In our CNN we propose to use ReLU and Sigmoid activation functions to determine our end result. The training is done only using the CPU power and no GPU is used. The research is done in two phases, image processing and applying neural network.


Author(s):  
P. Manoj Kumar ◽  
M. Parvathy ◽  
C. Abinaya Devi

Intrusion Detection Systems (IDS) is one of the important aspects of cyber security that can detect the anomalies in the network traffic. IDS are a part of Second defense line of a system that can be deployed along with other security measures such as access control, authentication mechanisms and encryption techniques to secure the systems against cyber-attacks. However, IDS suffers from the problem of handling large volume of data and in detecting zero-day attacks (new types of attacks) in a real-time traffic environment. To overcome this problem, an intelligent Deep Learning approach for Intrusion Detection is proposed based on Convolutional Neural Network (CNN-IDS). Initially, the model is trained and tested under a new real-time traffic dataset, CSE-CIC-IDS 2018 dataset. Then, the performance of CNN-IDS model is studied based on three important performance metrics namely, accuracy / training time, detection rate and false alarm rate. Finally, the experimental results are compared with those of various Deep Discriminative models including Recurrent Neural network (RNN), Deep Neural Network (DNN) etc., proposed for IDS under the same dataset. The Comparative results show that the proposed CNN-IDS model is very much suitable for modelling a classification model both in terms of binary and multi-class classification with higher detection rate, accuracy, and lower false alarm rate. The CNN-IDS model improves the accuracy of intrusion detection and provides a new research method for intrusion detection.


2019 ◽  
Vol 18 (2) ◽  
Author(s):  
Ida Bagus Leo Mahadya Suta ◽  
Rukmi Sari Hartati ◽  
Yoga Divayana

Tumor otak menjadi salah satu penyakit yang paling mematikan, salah satu jenis yang paling banyak ditemukan adalah glioma sekitar 6 dari 100.000 pasien adalah penderita glioma. Citra digital melalui Magnetic Resonance Imaging (MRI) merupakan salah satu metode untuk membantu dokter dalam menganalisa dan mengklasifikasikan jenis tumor otak. Namun, klasifikasi secara manual membutuhkan waktu yang lama dan memiliki resiko kesalahan yang tinggi, untuk itu dibutuhkan suatu cara otomatis dan akurat dalam melakukan klasifikasi citra MRI. Convolutional Neural Network (CNN) menjadi salah satu solusi dalam melakukan klasifikasi otomatis dalam citra MRI. CNN merupakan algoritma deep learning yang memiliki kemampuan untuk belajar sendiri dari kasus kasus sebelumnya. Dan dari penelitian yang telah dilakukan, diperoleh hasil bahwa CNN mampu dalam menyelesaikan klasifikasi tumor otak dengan akurasi yang tinggi. Peningkatan akurasi diperoleh dengan mengembangkan algoritma CNN baik melalui menentukan nilai kernel dan/atau fungsi aktivasi.


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