scholarly journals Characterizing allele-by-environment interactions using maize introgression lines

2019 ◽  
Author(s):  
Zhi Li ◽  
Sara B. Tirado ◽  
Dnyaneshwar C. Kadam ◽  
Lisa Coffey ◽  
Nathan D. Miller ◽  
...  
Keyword(s):  
Reproductive Traits ◽  
Developmental Time ◽  
Genotype By Environment Interaction ◽  
Growth Stages ◽  
Individual Plant ◽  
Environment Interaction ◽  
Planting Dates ◽  
Genotype By Environment ◽  
Whole Plant ◽  
Wide Range

AbstractRelatively small genomic introgressions containing quantitative trait loci can have significant impacts on the phenotype of an individual plant. However, the magnitude of phenotypic effects for the same introgression can vary quite substantially in different environments due to allele-by-environment interactions. To study potential patterns of allele-by-environment interactions, fifteen near-isogenic lines (NILs) with >90% B73 genetic background and multiple Mo17 introgressions were grown in 16 different environments. These environments included five geographical locations with multiple planting dates and multiple planting densities. The phenotypic impact of the introgressions was evaluated for up to 26 traits that span different growth stages in each environment to assess allele-by-environment interactions. Results from this study showed that small portions of the genome can drive significant genotype-by-environment interaction across a wide range of vegetative and reproductive traits, and the magnitude of the allele-by-environment interaction varies across traits. Some introgressed segments were more prone to genotype-by-environment interaction than others when evaluating the interaction on a whole plant basis throughout developmental time, indicating variation in phenotypic plasticity throughout the genome. Understanding the profile of allele-by-environment interaction is useful in considerations of how small introgressions of QTL or transgene containing regions might be expected to impact traits in diverse environments.Key MessageSignificant allele-by-environment interactions are observed for traits throughout development from small introgressed segments of the genome.

scholarly journals Identification of stable genotypes and genotype by environment interaction for grain yield in sorghum (Sorghum bicolor L. Moench)

2018 ◽  
Vol 17 (1) ◽  
pp. 81-86 ◽  
Author(s):  
Massaoudou Hamidou ◽  
Oumarou Souleymane ◽  
Malick N. Ba ◽  
Eric Yirenkyi Danquah ◽  
Issoufou Kapran ◽  
...  
Keyword(s):  
Grain Yield ◽  
Genotype By Environment Interaction ◽  
Planting Date ◽  
Environment Interaction ◽  
Gge Biplot ◽  
Food Crop ◽  
Planting Dates ◽  
Genotype By Environment ◽  
Biplot Analysis ◽  
Sorghum Bicolor L

AbstractSorghum is a staple food crop in Niger and its production is constrained by sorghum midge and the use of low yielding, local sorghum varieties. To improve sorghum productivity, it is crucial to provide farmers with high yielding sorghum cultivars that are resistant to midge. We evaluated 282 genotypes in four environments of Niger Republic. Alpha (0.1) lattice with two replications was the experimental design. Genotype and genotype by environment (GGE) biplot analysis was used to study grain yield (GY) stability and G × E interactions. The results revealed that two distinct mega environments were present. Genotype L232 was the best genotype for GY in the first planting date at Konni and the first and second planting dates (PDs) at Maradi. Genotype L17 was the best for GY in the second PD at Konni. The second PD at Konni was the most discriminating environment while the first PD at Konni is suitable for selecting widely adapted genotypes for GY.

Study of genotype by environment interaction in tall fescue genotypes and their polycross progenies in Iran based on AMMI model analysis

2016 ◽  
Vol 67 (7) ◽  
pp. 792
Author(s):  
M. R. Dehghani ◽  
M. M. Majidi ◽  
A. Mirlohi ◽  
G. Saeidi
Keyword(s):  
Tall Fescue ◽  
Genotype By Environment Interaction ◽  
Model Analysis ◽  
Forage Yield ◽  
Environment Interaction ◽  
Interaction Patterns ◽  
Yield Data ◽  
Genotype By Environment ◽  
Wide Range ◽  
Ammi Model

Development of forage grass genotypes which maintain a high level of performance over a wide range of environments is a goal of most breeding programs. In this study the additive main effects and multiplicative interactions (AMMI) model analysis was used to understand the complexity of genotype by environment interaction and to evaluate the adaptability and yield stability of some tall fescue genotypes and their selected polycross progenies. Replicated forage yield data of 72 genotypes (24 parental, 24 early flowering and 24 late flowering progenies) from six main cropping seasons (2008–14) at two locations and under two levels of irrigation were used for this purpose. The AMMI-1 analysis results accounted for 47.6% of the genotype by environment interaction. Interaction patterns revealed by AMMI-1 biplots indicated that most of the tall fescue genotypes were narrowly adapted and among all evaluated genotypes, only four genotypes (G22, G50, G62 and G65) with yield performance above the average were considered broadly adapted. The AMMI-1 mega-environment analysis indicated that all the environments in Lavark were grouped in one mega-environment, except for E1 and E2. For this mega-environment the winning genotypes were the genotypes G9, G48 and G72. The environments in Isfahan location, except for E13, were grouped in another mega-environment. The genotypes G23, G8 and G15 were the winners in this mega-environment.

Survival, height and genotype by environment interaction in winter wheat

1993 ◽  
Vol 73 (2) ◽  
pp. 417-427 ◽  
Author(s):  
J. B. Thomas ◽  
G. B. Schaalje ◽  
M. N. Grant
Keyword(s):  
Winter Wheat ◽  
Cold Stress ◽  
Grain Yield ◽  
Plant Height ◽  
High Stress ◽  
Genotype By Environment Interaction ◽  
Environment Interaction ◽  
Genotype By Environment ◽  
Wide Range ◽  
As Stress

This study examines the relationship between plant height, winterhardiness and genotype-by-environment interaction in the grain yield of winter wheat in western Canada. Positive correlations between plant height and winter survival ability (WSA) and between plant height and lodging score have persisted among entries in Western Hard Red Winter Wheat Cooperative Trials (WWC) for 33 yr. Progress has been made in developing winterhardy semidwarfs; however, no short cultivars have yet been isolated in the most hardy group. For Saskatchewan and Manitoba trials, correlations between WSA and yield (WSA:Y) were mostly positive, indicating widespread and intense cold stress. In southwest Alberta trials, WSA:Y ranged from significantly positive to significantly negative, indicating the wide range and unpredictability of cold stress in this area; in North and Central Alberta the distribution of WSA: Y was intermediate between southwest Alberta and Manitoba and Saskatchewan. In high stress trials (WSA:Y > 0.4), cultivar grain yield increased with increased cultivar height (on average, +0.024 tonnes ha−1 for each centimetre increase in height) but as stress levels declined, this relationship was reversed. In trials with WSA: Y < −0.4, cultivar yield was negatively related to cultivar height (average slope of −0.026 tonnes ha−1 per centimetre increase in height). Similar results were found in a trial of six winter wheat cultivars over three sites and 6 years within southern Alberta. In high stress trials, tall and hardy cultivars stabilized grain yield through high rates of survival while non-hardy cultivars performed poorly. Without damaging cold stress, short and non-hardy cultivars showed the highest yields and the greatest response to environmental productivity. Key words: Yield, winterhardiness, coldstress

scholarly journals Genotype by Environment Interaction and Grain Yield Stability of Drought Tolerant Cowpea landraces in Ethiopia

2021 ◽  
Author(s):  
Tesfaye Walle Mekonnen ◽  
Firew Mekbib ◽  
Berhanu Amsalu ◽  
Melaku Gedil ◽  
Maryke Labuschagne
Keyword(s):  
Grain Yield ◽  
Primary Source ◽  
Genotype By Environment Interaction ◽  
Climatic Conditions ◽  
Yield Stability ◽  
Environment Interaction ◽  
Lattice Design ◽  
Genotype By Environment ◽  
Drought Tolerant ◽  
Wide Range

Abstract Cowpea is one of the most important indigenous food and forage legumes in Africa. It serves as a primary source of protein for poor farmers in drought-prone areas of Ethiopia. The crop is used as a source of food, and insurance crop during the dry season. Cowpea is adaptable to a wide range of climatic conditions. Despite this, the productivity of the crop is generally low due to lack of stable and drought tolerant varieties. In this study, 25 cowpea genotypes were evaluated in five environments using a triple lattice design during the 2017 and 2018 main cropping seasons. The objectives of this study were to estimate the magnitude of genotype by environment interaction (GEI) and grain yield stability of selected drought tolerant cowpea genotypes across different environments. The additive main effect and multiplicative interaction (AMMI) model indicated the contribution of environment, genotype and GEI as 63.98 6%, 2.66% and 16.30% of the total variation for grain yield, respectively. The magnitudes of the GEI sum of squares were 6.12 times that of the genotypes for grain yield. The IPCA1, IPCA2 and IPCA3 were all significant and explained 45.47%, 28.05% and 16.59% of the GEI variation, respectively. The results from AMMI, cultivar superior measure (Pi), genotype plus genotype-by-environment (GGE) biplot yield stability index (YSI), and AMMI stability value (ASV) analyses identified NLLP-CPC-07-145-21, NLLP-CPC-103-B and NLLP_CPC-07-54 as stable and high yielding genotypes across environments. Thus, these genotypes should be recommended for release for production for drought prone areas. NLLP-CPC-07-143, Kanketi and CP-EXTERETIS were the least stable. The AMMI1 biplot showed that Jinka was a high potential and favorable environment while Babile was an unfavorable environment for cowpea production.

Using AMMI approach to delineate genotype by environment interaction and stability of barley (Hordeum vulgare L.) genotypes under northern Indian shivalik hill conditions

2020 ◽  
Vol 80 (03) ◽  
Author(s):  
Om Prakash Yadav ◽  
A. K. Razdan ◽  
Bupesh Kumar ◽  
Praveen Singh ◽  
Anjani K. Singh
Keyword(s):  
Hordeum Vulgare ◽  
Grain Yield ◽  
Principal Component ◽  
Genotype By Environment Interaction ◽  
Environment Interaction ◽  
Hordeum Vulgare L ◽  
Genotype By Environment ◽  
Biplot Analysis ◽  
Principal Component Axis ◽  
Ammi Analysis

Genotype by environment interaction (GEI) of 18 barley varieties was assessed during two successive rabi crop seasons so as to identify high yielding and stable barley varieties. AMMI analysis showed that genotypes (G), environment (E) and GEI accounted for 1672.35, 78.25 and 20.51 of total variance, respectively. Partitioning of sum of squares due to GEI revealed significance of interaction principal component axis IPCA1 only On the basis of AMMI biplot analysis DWRB 137 (41.03qha–1), RD 2715 (32.54qha–1), BH 902 (37.53qha–1) and RD 2907 (33.29qha–1) exhibited grain yield superiority of 64.45, 30.42, 50.42 and 33.42 per cent, respectively over farmers’ recycled variety (24.43qha–1).

Exploring genotype‐by‐environment interaction in sweet sorghum under tropical environments

2021 ◽  
Author(s):  
Vander Fillipe Souza ◽  
Pedro César de Oliveira Ribeiro ◽  
Indalécio Cunha Vieira Júnior ◽  
Isadora Cristina Martins Oliveira ◽  
Cynthia Maria Borges Damasceno ◽  
...  
Keyword(s):  
Sweet Sorghum ◽  
Genotype By Environment Interaction ◽  
Environment Interaction ◽  
Genotype By Environment ◽  
Tropical Environments

Genotype by environment interaction on phenology and synchronous maturity of mungbean

2021 ◽  
Author(s):  
Siti Marwiyah ◽  
Willy Bayuardi Suwarno ◽  
Desta Wirnas ◽  
Trikoesoemaningtyas xxx ◽  
Surjono Hadi Sutjahjo
Keyword(s):  
Genotype By Environment Interaction ◽  
Environment Interaction ◽  
Genotype By Environment

scholarly journals Genotype and environment interaction of sweetpotato varieties

2019 ◽  
Vol 44 (3) ◽  
pp. 501-512
Author(s):  
S Sultana ◽  
HC Mohanta ◽  
Z Alam ◽  
S Naznin ◽  
S Begum
Keyword(s):  
Tuber Yield ◽  
Agricultural Research ◽  
Genotype By Environment Interaction ◽  
Yield Potential ◽  
Environment Interaction ◽  
Dry Matter Content ◽  
Genotype By Environment ◽  
Discriminating Power ◽  
Study Results ◽  
Main Effect

The article presents results of additive main effect and multiplicative interaction (AMMI) and genotype (G) main effect and genotype by environment (GE) interaction (G × GE) biplot analysis of a multi environmental trial (MET) data of 15 sweetpotato varieties released from Bangladesh Agricultural Research Institute conducted during 2015–2018. The objective of this study was to determine the effects of genotype, environment and their interaction on tuber yield and to identify stable sweetpotato genotypes over the years. The experimental layout was a randomized complete block design with three replications at Gazipur location. Combined analysis of variance (ANOVA) indicated that the main effects due to genotypes, environments and genotype by environment interaction were highly significant. The contribution of genotypes, environments and genotype by environment interaction to the total variation in tuber yield was about 60.16, 10.72 and 12.82%, respectively. The first two principal components obtained by singular value decomposition of the centred data of yield accounted for 100% of the total variability caused by G × GE. Out of these variations, PC1 and PC2 accounted for 71.5% and 28.5% of variability, respectively. The study results identified BARI Mistialu- 5, BARI Mistialu- 14 and BARI Mistialu- 15 as the closest to the “ideal” genotype in terms of yield potential and stability. Varieties ‘BARI Mistialu- 8, BARI Mistialu- 11 and BARI Mistialu- 12’ were also selected as superior genotypes. BARI Mistialu- 3 and BARI Mistialu- 13 was comparatively low yielder but was stable over the environment. Among them BARI Mistialu-12, BARI Mistialu-14 and BARI Mistialu-15 are rich in nutrient content while BARI Mistialu-8 and BARI Mistialu-11 are the best with dry matter content and organoleptic taste. Environments representing in 1st and 3rd year with comparatively short vectors had a low discriminating power and environment in 2nd year was characterized by a high discriminating power. Bangladesh J. Agril. Res. 44(3): 501-512, September 2019

EFFECTS OF GROWTH INHIBITION BY HYDROCORTISONE ACETATE ON VARIANCE IN CHICKENS

1970 ◽  
Vol 12 (3) ◽  
pp. 627-634
Author(s):  
J. S. Gavora ◽  
G. C. Hodgson
Keyword(s):  
Body Weight ◽  
External Environment ◽  
Hormonal Treatment ◽  
Genotype By Environment Interaction ◽  
Future Research ◽  
Environment Interaction ◽  
Internal Environment ◽  
Hydrocortisone Acetate ◽  
Genotype By Environment ◽  
Treatment Interaction

Traditionally genotype by environment interaction studies have dealt with changes in external environment. In this experiment an attempt was made to alter internal environment and keep external environment constant. Cockerels from each of six different commercial stocks were injected with 0,1,2 and 4 mgs hydrocortisone acetate per 100 gms body weight at 14 days of age. This type of hormonal treatment was shown to release additional variability in growth without producing any stock-treatment interaction at the level of means. The results indicate a possible new avenue for future research.

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