A frameshift deletion in the GDF9 gene in Icelandic Loa prolific sheep

2021 ◽  
Author(s):  
Lars‐Erik Holm ◽  
Christian Bendixen ◽  
Emma Eythorsdottir ◽  
Jon H. Hallsson
Animals ◽  
2021 ◽  
Vol 11 (2) ◽  
pp. 571
Author(s):  
Fengyan Wang ◽  
Mingxing Chu ◽  
Linxiang Pan ◽  
Xiangyu Wang ◽  
Xiaoyun He ◽  
...  

Litter size is one of the most important economic traits in sheep. GDF9 and BMPR1B are major genes affecting the litter size of sheep. In this study, the whole coding region of GDF9 was sequenced and all the SNPs (single nucleotide polymorphisms) were determined in Luzhong mutton ewes. The FecB mutation was genotyped using the Sequenom MassARRAY®SNP assay technology. Then, the association analyses between polymorphic loci of GDF9 gene, FecB, and litter size were performed using a general linear model procedure. The results showed that eight SNPs were detected in GDF9 of Luzhong mutton sheep, including one novel mutation (g.41769606 T > G). The g.41768501A > G, g.41768485 G > A in GDF9 and FecB were significantly associated with litter size in Luzhong mutton ewes. The g.41768485 G > A is a missense mutation in the mature GDF9 protein region and is predicted to affect the tertiary structure of the protein. The results preliminarily demonstrated that GDF9 was a major gene affecting the fecundity of Luzhong mutton sheep and the two loci g.41768501A > G and g.41768485 G > A may be potential genetic markers for improving litter size.


2004 ◽  
Vol 186 (15) ◽  
pp. 5147-5152 ◽  
Author(s):  
Dongsheng Zhou ◽  
Zongzhong Tong ◽  
Yajun Song ◽  
Yanping Han ◽  
Decui Pei ◽  
...  

ABSTRACT Yersinia pestis has been historically divided into three biovars: antiqua, mediaevalis, and orientalis. On the basis of this study, strains from Microtus-related plague foci are proposed to constitute a new biovar, microtus. Based on the ability to ferment glycerol and arabinose and to reduce nitrate, Y. pestis strains can be assigned to one of four biovars: antiqua (glycerol positive, arabinose positive, and nitrate positive), mediaevalis (glycerol positive, arabinose positive, and nitrate negative), orientalis (glycerol negative, arabinose positive, and nitrate positive), and microtus (glycerol positive, arabinose negative, and nitrate negative). A 93-bp in-frame deletion in glpD gene results in the glycerol-negative characteristic of biovar orientalis strains. Two kinds of point mutations in the napA gene may cause the nitrate reduction-negative characteristic in biovars mediaevalis and microtus, respectively. A 122-bp frameshift deletion in the araC gene may lead to the arabinose-negative phenotype of biovar microtus strains. Biovar microtus strains have a unique genomic profile of gene loss and pseudogene distribution, which most likely accounts for the human attenuation of this new biovar. Focused, hypothesis-based investigations on these specific genes will help delineate the determinants that enable this deadly pathogen to be virulent to humans and give insight into the evolution of Y. pestis and plague pathogenesis. Moreover, there may be the implications for development of biovar microtus strains as a potential vaccine.


2018 ◽  
Vol 6 (12) ◽  
pp. 2399-2402
Author(s):  
Sweta Jain ◽  
Vamsee Chaitanya ◽  
Mohammed Faruq

2020 ◽  
Vol 7 (2) ◽  
pp. 283-292
Author(s):  
Faruk Hossain ◽  
Sharmin Akter Suma ◽  
Mohammad Shamsul Alam Bhuiyan

Sheep in Bangladesh are well known as efficient users of low quality roughages, welladapted to hot and humid agro-climatic conditions, capable of bi-annual lambing withmultiple births and resistant to common prevalent diseases. They play an important role inthe supply of animal protein. Present study aimed to investigate possible association ofGDF9 gene polymorphisms with litter size. A total of 126 DNA samples extracted from theblood of indigenous sheep from 5 locations namely Tangail, Noakhali, Naogaon,Gaibandha and Satkhira with known litter size were used to study the association ofGDF9 polymorphism by PCR based RFLP method. Two polymorphic regions of GDF9(FecG1 and FecG8) were amplified by PCR, digested with respective restriction enzymesand 126 sheep were genotyped. Current study revealed that genotype and allelefrequency for FecG1 varied among the sheep from different locations. The genotype (GG,AG, AA) frequency were 51.59%, 45.24% and 3.17% and the allele (G and A) frequenciesin the overall population were 74.21% and 25.79%, respectively. There was a significantassociation of FecG1 of GDF9 gene polymorphism with litter size. The homozygous GGgenotype had the lowest litter size (1.59±0.09; n=65) and homozygous AA genotype hadthe highest litter size (2.00±0.41; n=4). No genotypic variations were found for FecG8.Findings of this study specially the polymorphism of FecG1 together with genotyping ofsome sheep could be utilized in the selection program to increase the lamb productionpotentiality of indigenous sheep of Bangladesh. Res. Agric., Livest. Fish.7(2): 283-292,  August 2020


2018 ◽  
Vol 63 (8) ◽  
pp. 923-926 ◽  
Author(s):  
Alice Costantini ◽  
Panagiotis Ν. Krallis ◽  
Anders Kämpe ◽  
Emmanouil M. Karavitakis ◽  
Fulya Taylan ◽  
...  

2019 ◽  
Vol 10 ◽  
Author(s):  
Martijn F. L. Derks ◽  
Barbara Harlizius ◽  
Marcos S. Lopes ◽  
Sylvia W. M. Greijdanus-van der Putten ◽  
Bert Dibbits ◽  
...  

2017 ◽  
Vol 13 (7S_Part_13) ◽  
pp. P650-P650
Author(s):  
Holly N. Cukier ◽  
Neil Mehta ◽  
Juliana Ramirez ◽  
Sophie Rolati ◽  
Patrice L. Whitehead ◽  
...  

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