scholarly journals Virtual microscopy and digital pathology in training and education

Apmis ◽  
2012 ◽  
Vol 120 (4) ◽  
pp. 305-315 ◽  
Author(s):  
Peter W. Hamilton ◽  
Yinhai Wang ◽  
Stephen J. McCullough
Author(s):  
Marcial García Rojo ◽  
Christel Daniel

In anatomic pathology, digital pathology integrates information management systems to manage both digital images and text-based information. Digital pathology allows information sharing for diagnosis, biomedical research and education. Virtual microscopy resulting in digital slides is an outreaching technology in anatomic pathology. Limiting factors in the expansion of virtual microscopy are formidable storage dimension, scanning speed, quality of image and cultural change. Anatomic pathology data and images should be an important part of the patient electronic health records as well as of clinical datawarehouses, epidemiological or biomedical research databases, and platforms dedicated to translational medicine. Integrating anatomic pathology to the “healthcare enterprise” can only be achieved using existing and emerging medical informatics standards like Digital Imaging and Communications in Medicine (DICOM®1), Health Level Seven (HL7®), and Systematized Nomenclature of Medicine-Clinical Terms (SNOMED CT®), following the recommendations of Integrating the Healthcare Enterprise (IHE®).


CytoJournal ◽  
2009 ◽  
Vol 6 ◽  
pp. 6 ◽  
Author(s):  
Liron Pantanowitz ◽  
Maryanne Hornish ◽  
Robert A. Goulart

With the introduction of digital imaging, pathology is undergoing a digital transformation. In the field of cytology, digital images are being used for telecytology, automated screening of Pap test slides, training and education (e.g. online digital atlases), and proficiency testing. To date, there has been no systematic review on the impact of digital imaging on the practice of cytopathology. This article critically addresses the emerging role of computer-assisted screening and the application of digital imaging to the field of cytology, including telecytology, virtual microscopy, and the impact of online cytology resources. The role of novel diagnostic techniques like image cytometry is also reviewed.


2011 ◽  
pp. 1235-1262
Author(s):  
Marcial García Rojo ◽  
Christel Daniel

In anatomic pathology, digital pathology integrates information management systems to manage both digital images and text-based information. Digital pathology allows information sharing for diagnosis, biomedical research and education. Virtual microscopy resulting in digital slides is an outreaching technology in anatomic pathology. Limiting factors in the expansion of virtual microscopy are formidable storage dimension, scanning speed, quality of image and cultural change. Anatomic pathology data and images should be an important part of the patient electronic health records as well as of clinical datawarehouses, epidemiological or biomedical research databases, and platforms dedicated to translational medicine. Integrating anatomic pathology to the “healthcare enterprise” can only be achieved using existing and emerging medical informatics standards like Digital Imaging and Communications in Medicine (DICOM®1), Health Level Seven (HL7®), and Systematized Nomenclature of Medicine-Clinical Terms (SNOMED CT®), following the recommendations of Integrating the Healthcare Enterprise (IHE®).


2019 ◽  
Vol 64 (11) ◽  
pp. 649-653
Author(s):  
I. A. Kruglova ◽  
S. V. Zinoviev ◽  
O. V. Utkin ◽  
A. N. Denisenko ◽  
O. E. Ilyinskaya ◽  
...  

Cytological study is a highly specialized type of laboratory analysis of the cellular composition of biological material and is to assess the morphological characteristics of cellular elements. The modern development of digital technologies is increasingly forming the interest of specialists to such a section as telepathology (digital pathology), which is a process of virtual microscopy with the transformation of classical cytological preparations into digital. Most morphologists currently use some forms of digital imaging, such as static images obtained by optical cameras mounted under a microscope. The development of more high quality image and resolution in the digital pathology promotes the use of telepathology, including telecitology in their daily work for training specialists, counselling of medications, monitoring the quality of diagnosis.


Author(s):  
Ritu Lakhtakia

Objectives: Whole-slide imaging (WSI) and virtual microscopy (VM) have revolutionized teaching, diagnosis and research in histopathology. The aims of this study were to establish the feasibility of achieving early integration of clinical reasoning with undergraduate pathology teaching on a virtual microscopy platform and, to determine its student-centricity through student feedback. Methods: Thirty-eight VM-centered clinical cases were introduced to forty-nine students in an integrated undergraduate medical curriculum. The cases were aligned to curricular objectives, reinforced the pathologic basis of disease with critical thinking and were delivered across fifteen interactive small-group sessions. A simulated cross-disciplinary integration and judicious choice of pertinent diagnostic investigations was linked to principles of management. Feedback was obtained through a mixed-methods approach. Results:  User-friendliness, gradual learning curve of VM and annotation-capacity were scored 4-5 on a Likert scale of 1-5 by 91.84%, 87.75% and 83.67% students respectively. Students agreed on content-match to the stage of learning (81.63%), theme of the week (91.84%) and development of a strong clinical foundation (77.5%). Integration (85.71%) and clinico-pathological correlation (83.67%) were strengths of this educational effort. High student attendance (~100%) and improved assessment scores on critical thinking (80%) were observed. Software lacunae included frequent logouts and lack of note-taking tools. Easy access was a significant student-centric advantage. Conclusion: A VM-centered approach with clinico-pathological correlation has been successfully introduced to inculcate integrated learning. Using the pathologic basis of disease as fulcrum and critical reasoning as anchor, a digitally-enabled generation of medical students have embraced this educational tool for tutor-guided, student-centered learning. Keywords: virtual, digital, pathology, microscopy, medical education


2021 ◽  
Vol 8 ◽  
pp. 237428952110068
Author(s):  
Robert J. Christian ◽  
Mandy VanSandt

The COVID-19 pandemic has forced educational programs, including pathology residency, to move to a physically distanced learning environment. Tandem microscopic review (also known as “double-scoping”) of pathology slides is a traditional cornerstone of pathology education. However, this requires the use of a double- or multi-headed optical light microscope which is unfortunately not amenable to physical distancing. The loss of double-scoping has forced educational innovation in order to continue teaching microscopy. Digital pathology options such as whole slide imaging could be considered; however, financial constraints felt by many departments often render this option cost-prohibitive. Alternatively, a shift toward teaching via dynamic virtual microscopy offers a readily available, physically distanced, and cost-conscious alternative for pathology education. Required elements include a standard light microscope, a mounted digital camera, computers, and videoconferencing software to share a slide image with the learner(s). Through survey data, we show immediate benefits include maintaining the essence of the traditional light microscope teaching experience, and additional gains were discovered such as the ability for educators and learners to annotate images in real time, among others. Existing technology may not be initially optimized for a dynamic virtual experience, resulting in lag time with image movement, problems focusing, image quality issues, and a narrower field of view; however, these technological barriers can be overcome through hardware and software optimization. Herein, we share the experience of establishing a dynamic virtual microscopy educational system in response to the COVID-19 pandemic, utilizing readily available technology in the pathology department of a major academic medical center.


2012 ◽  
Vol 35 (2) ◽  
pp. 93-95 ◽  
Author(s):  
Essam Ayad ◽  
Yukako Yagi

Background: Telepathology, the practice of pathology at a long distance, has advanced continuously since 1986. The progress of telepathology passed through four stages: Static, Dynamic, Hybrid & Whole Slide Imaging.Materials and Methods: A pilot project between the Italian Hospital in Cairo & the Civico Hospital in Palermo was completed successfully, applying the static & dynamic techniques of telepathology. This project began in 2003 and continued till now. In 2004, centers in Venice, London and Pittsburgh participated actively in our project.Results: Over eight years we consulted on many problematic pathological cases with specialized pathological centers in Italy, UK & USA. In addition to the highly specialized scientific value, we saved a lot of time and money.Conclusion: We concluded from our experience that telepathology is a very useful and applicable tool for additional consulting on difficult pathological cases especially for emerging countries. In view of this success we have already established our Digital Telepathology Unit in Cairo University, using the WSI technique in teaching which was greatly successful and encouraged us to build a huge digital pathology library which will expand our telepathology & E-learning programs to cover staff and students in Egypt and Eastern Mediterranean.


2020 ◽  
pp. 019262332096589
Author(s):  
David A. Clunie

As the use of digital techniques in toxicologic pathology expands, challenges of scalability and interoperability come to the fore. Proprietary formats and closed single-vendor platforms prevail but depend on the availability and maintenance of multiformat conversion libraries. Expedient for small deployments, this is not sustainable at an industrial scale. Primarily known as a standard for radiology, the Digital Imaging and Communications in Medicine (DICOM) standard has been evolving to support other specialties since its inception, to become the single ubiquitous standard throughout medical imaging. The adoption of DICOM for whole slide imaging (WSI) has been sluggish. Prospects for widespread commercially viable clinical use of digital pathology change the incentives. Connectathons using DICOM have demonstrated its feasibility for WSI and virtual microscopy. Adoption of DICOM for digital and computational pathology will allow the reuse of enterprise-wide infrastructure for storage, security, and business continuity. The DICOM embedded metadata allows detached files to remain useful. Bright-field and multichannel fluorescence, Z-stacks, cytology, and sparse and fully tiled encoding are supported. External terminologies and standard compression schemes are supported. Color consistency is defined using International Color Consortium profiles. The DICOM files can be dual personality Tagged Image File Format (TIFF) for legacy support. Annotations for computational pathology results can be encoded.


2020 ◽  
Vol 35 (Supplement_3) ◽  
Author(s):  
Vincenzo L'Imperio ◽  
Franco Ferrario ◽  
Manuela Nebuloni ◽  
Federico Pieruzzi ◽  
Renato Alberto Sinico ◽  
...  

Abstract Background and Aims Whole-slide imaging (WSI) and virtual microscopy are useful tools implemented in the routine pathology workflow in the last 10 years, allowing second-opinion on definitive or frozen-section diagnosis (telepathology) and demonstrating a substantial role in multidisciplinary (MDT) meetings and education (Griffin et al, Histopathology. 2017;70(1):134-145). The FDA approval of the clinical employment of this technology led to the progressive digitalization of routine pathological practice. In this setting, a recent work explored the usefulness of this technology applied to renal biopsies, stressing the possibility to create integrate networks to share cases for diagnostic and research purposes (Barisoni et al, Clin Kidney J. 2017;10(2):176–187). Here is discussed the 5-years experience of an Italian Renal Pathology service in which telepathology is a definitive standard of care. Method Renal biopsies were collected in the Anatomic Pathology Department of San Gerardo Hospital, Monza, Italy from 14 different Italian Nephrology centers (9 from the North, 1 from the Center and 4 from the South of Italy) from January 2015 to December 2019. After the routing processing of the tissue, biopsies were scanned with Aperio CS2 device for light microscopy and Aperio ScanScope FL for immunofluorescence (Leica Biosystem, Illinois, USA, Figure 1A). Digital slides were then imported in the Spectrum platform along with the final report and additional pictures (eg. electron micrographs and special stains) such as shown in Figure 1B. Results In 5 years, 704 renal biopsies (interval 110-160) were scanned and analysed with a turnaround time of around 2-3 working days. The most frequent diagnosis was represented by MN (16%, 115 cases, interval 18-28) followed by IgA nephropathy (12%, 84 cases, interval 12-21), FSGS (9%, 66 cases, interval 8-18), MCD (8%, 54 cases, interval 7-13), paucimmune crescentic GN (7%, 48 cases, interval 6-13), diabetic nephropathy (6%, 45 cases, interval 6-12), lupus nephritis (5%, 37 cases, interval 5-11), arterionephrosclerosis (5%, 35 cases, interval 5-13), amyloidosis (5%, 32 cases, interval 3-7) and tubulointerstitial nephritis (4%, 28 cases, interval 4-6). Only 4% of cases (28, interval 4-10) were suboptimal for the diagnosis and the remaining 19% (132 cases, interval 20-36) were characterized by rarer diseases, as detailed in Figure 1C. Conclusion In renal pathology the assessment of biopsies with different techniques (light and electron microscopy and immunofluorescence) is mandatory and can represent an obstacle in the routine employment of digital pathology. In the present experience we demonstrated the feasibility and sustainability of the digital switch in renal pathology routine, thanks to appropriate devices and platform. This led to store cases for teaching and MDT meetings, allowing to maintain the same short turnaround time for the diagnosis. Moreover, the employment of WSI technique can allow to couple the proteomic features of renal tissue with the classic morphological aspects of the diseased parenchyma (L’Imperio et al Proteomics Clin Appl. 2016 Apr;10(4):371-83). This approach, along with the possibility of a multicentric enrollment of patients, led to the publication of 6 scientific papers in highly impacted journals, further confirming the positive role of digital pathology in this field.


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