Malaysian weedy rice shows its true stripes: wildOryzaand elite rice cultivars shape agricultural weed evolution in Southeast Asia

2014 ◽  
Vol 23 (20) ◽  
pp. 5003-5017 ◽  
Author(s):  
Beng-Kah Song ◽  
Tse-Seng Chuah ◽  
Sheh May Tam ◽  
Kenneth M. Olsen
Keyword(s):  
Southeast Asia ◽  
Weedy Rice ◽  
Rice Cultivars ◽  
Agricultural Weed ◽  
Weed Evolution

scholarly journals Molecular and Physiological Responses of Rice and Weedy Rice to Heat and Drought Stress

Agriculture ◽  
2020 ◽  
Vol 11 (1) ◽  
pp. 9
Author(s):  
Leonard Bonilha Piveta ◽  
Nilda Roma-Burgos ◽  
José Alberto Noldin ◽  
Vívian Ebeling Viana ◽  
Claudia de Oliveira ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Heat Stress ◽  
Drought Stress ◽  
Intercellular Co2 Concentration ◽  
Tiller Number ◽  
Weedy Rice ◽  
Photosynthetic Parameters ◽  
World Population ◽  
Rice Grain ◽  
Rice Cultivars

Rice is the staple food for about half of the world population. Rice grain yield and quality are affected by climatic changes. Arguably, rice cultivars’ genetic diversity is diminished from decades of breeding using narrow germplasm, requiring introgressions from other Oryza species, weedy or wild. Weedy rice has high genetic diversity, which is an essential resource for rice crop improvement. Here, we analyzed the phenotypic, physiological, and molecular profiles of two rice cultivars (IRGA 424 and SCS119 Rubi) and five weedy rice (WR), from five different Brazilian regions, in response to heat and drought stress. Drought and heat stress affected the phenotype and photosynthetic parameters in different ways in rice and WR genotypes. A WR from Northern Brazil yielded better under heat stress than the non-stressed check. Drought stress upregulated HSF7A while heat stress upregulated HSF2a. HSP74.8, HSP80.2, and HSP24.1 were upregulated in both conditions. Based on all evaluated traits, we hypothesized that in drought conditions increasing HSFA7 expression is related to tiller number and that increase WUE (water use efficiency) and HSFA2a expression are associated with yield. In heat conditions, Gs (stomatal conductance) and E’s increases may be related to plant height; tiller number is inversely associated with HSPs expression, and chlorophyll content and Ci (intercellular CO2 concentration) may be related to yield. Based on morphology, physiology, and gene regulation in heat and drought stress, we can discriminate genotypes that perform well under these stress conditions and utilize such genotypes as a source of genetic diversity for rice breeding.

Competitive ability of weedy rice: toward breeding weed-suppressive rice cultivars

2020 ◽  
Vol 34 (4) ◽  
pp. 455-469 ◽  
Author(s):  
Swati Shrestha ◽  
Gourav Sharma ◽  
Nilda Roma Burgos ◽  
Te-Ming Tseng
Keyword(s):  
Competitive Ability ◽  
Weedy Rice ◽  
Rice Cultivars

Do adjuvants reduce the antagonism of quizalofop-p-ethyl when mixed with bispyribac-Na?

2019 ◽  
Vol 34 (2) ◽  
pp. 180-187
Author(s):  
L. Connor Webster ◽  
Eric P. Webster ◽  
David C. Blouin ◽  
Benjamin M. McKnight
Keyword(s):  
Field Study ◽  
Nitrogen Source ◽  
Weed Control ◽  
Weedy Rice ◽  
Research Station ◽  
Rice Cultivars ◽  
Red Rice ◽  
Silicon Based ◽  
Grass Weed ◽  
Antagonistic Interactions

AbstractAcetyl co-enzyme A carboxylase (ACCase)-resistant rice allows quizlaofop-p-ethyl to be applied as a POST control of troublesome grass weeds. A field study was conducted in 2017 and 2018 at the H. Rouse Caffey Rice Research Station near Crowley, LA, to evaluate the influence of a crop oil concentrate (COC), a silicon-based surfactant plus a nitrogen source (SNS), or a high-concentrate COC (HCOC) in overcoming the grass weed control antagonism of quizalofop-p-ethyl when mixed with bispyribac-Na. Quizalofop-p-ethyl was applied at 120 g ai ha−1, bispyribac-Na was applied at 34 g ai ha−1, and all adjuvants were applied at 1% vol/vol. Antagonistic interactions were observed at 14 d after treatment (DAT) when quizalofop-p-ethyl was mixed with bispyribac-Na with no adjuvant for control of barnyardgrass, the non–ACCase-tolerant rice cultivars ‘CL-111’ and ‘CLXL-745’, and red rice. At 14 DAT, antagonism of quizalofop-p-ethyl for control of barnyardgrass was observed when mixed with bispyribac-Na plus COC, SNS, or HCOC, with an observed control of 43%, 63%, and 86%, respectively, compared with an expected control of 95% for quizalofop-p-ethyl alone. However, the antagonism of quizalofop-p-ethyl when mixed with bispyribac-Na plus HCOC for barnyardgrass control at 14 DAT was overcome by 28 DAT, with an observed control of 91%, compared with an expected control of 97%. Synergistic or neutral interactions were observed at 14 and 28 DAT when COC, SNS, or HCOC was added to a mixture of quizalofop-p-ethyl plus bispyribac-Na for CL-111, CLXL-745, and red rice control. According to the results of this study, HCOC is the most effective adjuvant for quizalofop-p-ethyl and bispyribac-Na mixtures for control of weedy rice and barnyardgrass.

Response of weedy rice (Oryzaspp.) germplasm from Arkansas to glyphosate, glufosinate, and flumioxazin

Weed Science ◽  
2019 ◽  
Vol 67 (3) ◽  
pp. 303-310 ◽  
Author(s):  
Swati Shrestha ◽  
Gourav Sharma ◽  
Nilda Roma Burgos ◽  
Te-Ming Tseng
Keyword(s):  
Crop Improvement ◽  
Herbicide Tolerance ◽  
Weedy Rice ◽  
Response Analysis ◽  
Rice Cultivars ◽  
Plant Mortality ◽  
Cultivated Rice ◽  
Seed Shattering ◽  
Asynchronous Maturation ◽  
High Tillering

AbstractWeedy rice (Oryzaspp.) is one of the most competitive weeds in rice (Oryza sativaL.) production. Rapid growth, high tillering, enhanced ability to uptake fertilizers, asynchronous maturation, seed shattering, and high seedbank longevity makeOryzaspp. more competitive than cultivated rice and highly persistent.Oryzaspp. may be a source of useful traits for crop improvement such as herbicide tolerance. Greenhouse studies were conducted to evaluate the response of 54Oryzaspp. accessions collected between 2008 and 2009 from Arkansas to glyphosate, glufosinate, and flumioxazin applied at field rates. Rice cultivars ‘CL163’ and ‘REX’ were included for comparison. Accessions B20, B2, and S11 and B49, B51, and S59 showed reduced sensitivity to glyphosate and flumioxazin, respectively. These accessions had less than 40% injury 5 wk after treatment (WAT). Rice cultivars (CL163 and REX) were sensitive to both glyphosate and flumioxazin, with more than 95% plant mortality at 5 WAT. On average, blackhull accessions were more tolerant to glyphosate and flumioxazin than strawhull accessions. Dose–response analysis of B20, B2, and S11 confirmed 3- to 8-fold higher tolerance of these accessions to glyphosate. AllOryzaspp. and cultivated rice were not affected by glufosinate applied at 874 g ai ha−1(1X) and were controlled 100% by 1,311 g ai ha−1(1.5X).Oryzaspp. lines with reduced sensitivity to glyphosate and flumioxazin will be studied further for use in rice crop improvement.

scholarly journals Call of the wild rice: Oryza rufipogon shapes weedy rice evolution in Southeast Asia

2018 ◽  
Vol 12 (1) ◽  
pp. 93-104 ◽  
Author(s):  
Cynthia C. Vigueira ◽  
Xinshuai Qi ◽  
Beng‐Kah Song ◽  
Lin‐Feng Li ◽  
Ana L. Caicedo ◽  
...  
Keyword(s):  
Southeast Asia ◽  
Wild Rice ◽  
Oryza Rufipogon ◽  
Weedy Rice

scholarly journals Interactive Effect of Weeding Regimes, Rice Cultivars, and Seeding Rates Influence the Rice-Weed Competition under Dry Direct-Seeded Condition

2020 ◽  
Vol 13 (1) ◽  
pp. 317
Author(s):  
Sharif Ahmed ◽  
M. Jahangir Alam ◽  
Akbar Hossain ◽  
A. K. M. Mominul Islam ◽  
Tahir H. Awan ◽  
...  
Keyword(s):  
Weed Management ◽  
Oryza Sativa L ◽  
Interactive Effect ◽  
Rice Production ◽  
Weedy Rice ◽  
Rice Grain ◽  
Rice Cultivars ◽  
Seeding Rate ◽  
Direct Seeded ◽  
Hybrid Cultivar

Dry direct-seeded rice (Oryza sativa L.), a climate-smart and resource-efficient (labor and water) rice production technology is gaining popularity in many parts of Asian countries; however, weeds are the major constraints for its early establishment and optimum productivity. Chemical weed management is effective, rapid, and also decreases weed management costs in dry direct-seeded rice (DSR) system; however, chemical use for weed management have a negative effect on the environment and also have human health hazards. Therefore, integrated weed management (IWM) is the best option for the sustainability of rice production under the DSR system. Improving competitiveness against weeds, weed-competitive rice cultivars, and high seeding rates were found to be the most promising IWM strategies in DSR. In this context, a field study was conducted to evaluate the weed competitiveness of rice cultivars and seeding rates on the performance of aus rice in dry direct-seeded systems in Bangladesh. Three inbred rice cultivars (CV), namely “BRRI dhan26”, “BRRI dhan48”, and “BRRI dhan55”, and one hybrid cultivar, “Arize” were tested in a seeding rate (SR) of 20, 40, and 80 kg ha−1 under two weeding regimes (WR) of weed-free and partially-weedy. Rice grain yield was strongly affected (p < 0.01) by the interactions of WR, CV, and SR. In weed-free conditions, the yield of all three inbred cultivars was increased up to SR of 40 kg ha−1 and for the hybrid cultivar, up to SR of 20 kg ha−1, and with further increment of SR, there was no yield advantage. Conversely, under partially weedy conditions, the yield of three inbred cultivars increased up to SR of 80 kg ha−1; however, for the hybrid cultivar, this increment was up to SR of 40 kg ha−1 and thereafter, no yield gain. In weedy conditions, the higher SR compensates for the yield losses by increasing the competitiveness of rice with weeds. Across SR, the hybrid cultivar had a significantly (p < 0.01) higher weed competitive index (WCI) than all the inbred cultivars and the highest SR always had a higher WCI.

scholarly journals A large-scale analysis of seed natural aging revealed stronger aging resistance in weedy rice than coexisting cultivated rice for continuous 4 years across China

2019 ◽  
Author(s):  
weimin dai ◽  
Yuan Wang ◽  
Yu-Jie Zhang ◽  
Xi-Xi Sun ◽  
Jin-Ling Yang ◽  
...  
Keyword(s):  
Oryza Sativa ◽  
Large Scale ◽  
Oryza Sativa L ◽  
Germination Rate ◽  
Weedy Rice ◽  
Japonica Rice ◽  
Rice Cultivars ◽  
Cultivated Rice ◽  
Rice Varieties ◽  
Aging Resistance

Abstract Increasing resistance to aging is conducive to seed storage and germination rate of crop. Meanwhile, the resistance to aging is one of the important adaptive mechanisms of weed to thrive in farmland. Weedy rice (Oryza sativa f. spontanea) and cultivated rice (Oryza sativa L.) provide a unique pair demonstrating a weed and conspecific model crop that can be used to study the aging resistance of plants across a diverse geographical range. Chinese weedy rice derived from de-domestication of cultivated rice has rapidly risen to malignant weeds, though the hazard has only been reported for about 20 years. Whether weedy rice rapidly evolves higher seed aging resistance than cultivated rice during the process of dedomestication, which is conducive to its persistence in rice fields, is still unclear. In this experiment, the seeds of weed rice populations and their co-existing rice varieties were collected from 61 regions of China and germinated under normal and high temperatures for consecutive four years (2013–2016). Our study found that the aging resistance of weedy rice was higher than that of the co-existing rice cultivars, and weedy rice may have evolved a different aging resistance mechanism than rice cultivars and could be used as a germplasm resource to cultivate aging-resistant rice. The indica-type has strong aging resistance and no dormancy, while the japonica type has weak aging resistance and a little weak dormancy. Thus, by introducing indica-type aging-resistant alleles into japonica rice, cultivation of aging-resistant japonica rice could be possible.

Distribution of Weedy Red Rice (Oryza sativa) Resistant to Imidazolinone Herbicides and its Relationship to Rice Cultivars and Wild Oryza Species

Weed Science ◽  
2014 ◽  
Vol 62 (2) ◽  
pp. 280-293 ◽  
Author(s):  
Ives C. G. R. Goulart ◽  
Tereza C. O. Borba ◽  
Valmir G. Menezes ◽  
Aldo Merotto
Keyword(s):  
Herbicide Resistance ◽  
Acetolactate Synthase ◽  
Oryza Rufipogon ◽  
Weedy Rice ◽  
Oryza Glaberrima ◽  
Rice Cultivars ◽  
Red Rice ◽  
Seed Migration ◽  
Imidazolinone Herbicides ◽  
Weedy Red Rice

Several weedy red rice populations have evolved resistance to imidazolinone herbicides worldwide. The understanding of the factors related to the herbicide resistance in weedy red rice is important to prevent its occurrence in new areas where imidazolinone-resistant rice cultivars are being used, and to manage the new rice cultivars resistant to herbicides with modes of action other than the acetolactate synthase (ALS)-inhibitors that are being developed. The objectives of this study were to analyze the relationship of weedy red rice populations from southern Brazil with rice cultivars and wild Oryza species and to evaluate the occurrence of introgression from rice cultivars and seed migration as the origin of resistance to imidazolinone herbicides in weedy rice. The study was based on 27 weedy red rice populations, seven rice cultivars, and four wild Oryza species that were genotyped with 24 simple sequence repeats and three ALS-specific single-nucleotide polymorphism markers. A large proportion of the genetic variation of the weedy red rice populations was found within (74%) rather than among populations (26%). The weedy red rice populations were more closely related to the newer rice cultivars that are imidazolinone-resistant than to the older cultivars. The South American native Oryza glumaepatula and the other wild Oryza species—Oryza rufipogon, Oryza longistaminata, and Oryza glaberrima—clustered separately from weedy red rice populations, indicating a low likelihood of introgression among weedy red rice and these wild species. Seed migration was an important factor in the genetic structure of the evaluated weedy red rice populations, although gene flow by pollen from resistant cultivars was the principal reason for the spread of herbicide resistance.

Mutations in the red rice ALS gene associated with resistance to imazethapyr

Weed Science ◽  
2005 ◽  
Vol 53 (5) ◽  
pp. 567-577 ◽  
Author(s):  
Satyendra N. Rajguru ◽  
Nilda R. Burgos ◽  
Vinod K. Shivrain ◽  
James McD. Stewart
Keyword(s):  
Gene Flow ◽  
Ssr Markers ◽  
Point Mutations ◽  
Acetolactate Synthase ◽  
Weedy Rice ◽  
Rice Cultivars ◽  
Red Rice ◽  
Coding Region ◽  
Gene Sequences ◽  
Herbicide Resistant

The introduction of Clearfield (CL) rice cultivars resistant to imidazolinone herbicides, acetolactate synthase (ALS) inhibitors, has raised concerns of gene flow to weedy rice genotypes collectively called “red rice” that infest rice-growing areas in the southern United States. This experiment was conducted to study hybridization between CL rice and red rice using simple sequence repeats (SSR) markers, identify mutations in the ALS gene of imazethapyr-resistant red rice, and to detect the introgression of the ALS-resistant gene from CL rice into red rice. Natural outcrossing experiments between CL rice and strawhull (SH) red rice were set up in Stuttgart, AR, in 2002 and 2003. Putative red rice hybrids were detected among volunteer plants in the following year. Hybridization was confirmed using SSR markers, and introgression of the resistant ALS gene from CL rice to red rice was detected by ALS gene sequencing. The ALS gene sequences of U.S. rice cultivars ‘Bengal’ and ‘Cypress’, SH red rice, CL rice (CL161), and imazethapyr-resistant red rice/CL rice hybrids were compared. Nucleotide sequences of the ALS gene from the rice cultivars were identical. Three point mutations were present in the SH red rice ALS gene coding region relative to Bengal/Cypress. One of these resulted in the substitution of Asp630for Glu630. The ALS gene sequences of confirmed hybrids were identical to that of the herbicide-resistant pollen source, CL161. We identified four ALS gene mutations in the herbicide-resistant red rice hybrids relative to the susceptible rice cultivars. One point mutation, resulting in a substitution of Ser653with Asn, was linked to ALS resistance in callus tissue derived from a Kinmaze rice line from Japan. The other three mutations (Ser186—Pro, Lys416—Glu, and Leu662—Pro) are novel. This experiment confirmed that gene flow from imidazolinone-resistant rice resulted in herbicide-resistant red rice plants.

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