scholarly journals Draft Genome Sequence of Phenol-Degrading Variovorax boronicumulans Strain c24

2020 ◽  
Vol 9 (37) ◽  
Author(s):  
Fatma Azwani Abdul Aziz ◽  
Kenshi Suzuki ◽  
Koki Amano ◽  
Ryota Moriuchi ◽  
Hideo Dohra ◽  
...  
Keyword(s):  
Energy Source ◽  
Genome Sequence ◽  
Chemostat Culture ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Degradation Mechanisms ◽  
Content Type ◽  
Genome Data ◽  
Xenobiotic Compound

ABSTRACT We report the draft genome sequence of Variovorax boronicumulans strain c24, which was isolated from a soil-inoculated chemostat culture amended with phenol as a sole carbon and energy source. The genome data will provide insights into phenol and other xenobiotic compound degradation mechanisms for bioremediation applications.

scholarly journals Draft Genome Sequence of the Strain Francisella tularensis subsp. mediasiatica 240, Isolated in Kazakhstan

2020 ◽  
Vol 9 (35) ◽  
Author(s):  
Marat Kuibagarov ◽  
Alma Kairzhanova ◽  
Gilles Vergnaud ◽  
Asylulan Amirgazin ◽  
Larissa Lukhnova ◽  
...  
Keyword(s):  
Francisella Tularensis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Southern Region ◽  
Draft Genome Sequence ◽  
Tularensis Subsp ◽  
Content Type ◽  
Genome Data

ABSTRACT Francisella tularensis subsp. mediasiatica is the least studied among the four F. tularensis subspecies. We present here the genome data of F. tularensis subsp. mediasiatica 240, isolated in the southern region of Kazakhstan.

scholarly journals Draft Genome Sequence of Pseudomonas aeruginosa Strain Hex1T Isolated from Soils Contaminated with Used Lubricating Oil in Argentina

2017 ◽  
Vol 5 (2) ◽  
Author(s):  
Adela M. Luján ◽  
Sofía Feliziani ◽  
Andrea M. Smania
Keyword(s):  
Energy Source ◽  
Pseudomonas Aeruginosa ◽  
Genome Sequence ◽  
Draft Genome ◽  
Heavy Metal Resistance ◽  
Metal Resistance ◽  
Draft Genome Sequence ◽  
Lubricating Oil ◽  
Content Type ◽  
Used Lubricating Oil

ABSTRACT Pseudomonas aeruginosa Hex1T was isolated from soils contaminated with used lubricating oil from a garage in Córdoba, Argentina. This strain is capable of utilizing this pollutant as the sole carbon and energy source. Here, we present the 6.9-Mb draft genome sequence of Hex1T, which contains many heavy metal-resistance genes.

scholarly journals Draft Genome Sequence of the Caffeine-Degrading Methylotroph Methylorubrum populi Pinkel

2019 ◽  
Vol 8 (47) ◽  
Author(s):  
Rebecca E. Parales ◽  
Gaurav Sharma ◽  
Xiangsheng Zhang ◽  
Gabriel A. Subuyuj ◽  
Jordan T. Langner ◽  
...  
Keyword(s):  
Energy Source ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Quality ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Selective Enrichment ◽  
Caffeine Degradation

A pink-pigmented facultative methylotroph, Methylorubrum populi Pinkel, was isolated from compost by selective enrichment with caffeine (3,5,7-trimethylxanthine) as the sole carbon, nitrogen, and energy source. We report here its high-quality draft genome sequence, assembled in 35 contigs totaling 5,630,907 bp. We identified 5,681 protein-coding sequences, including those putatively involved in caffeine degradation.

scholarly journals Genome Sequence of Saccharomyces cerevisiae Strain Kagoshima No. 2, Used for Brewing the Japanese Distilled Spirit Shōchū

2017 ◽  
Vol 5 (41) ◽  
Author(s):  
Kazuki Mori ◽  
Chihiro Kadooka ◽  
Chika Masuda ◽  
Ai Muto ◽  
Kayu Okutsu ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Genome Sequence ◽  
Genetic Background ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Genome Data ◽  
Characteristic Features

ABSTRACT Here, we report a draft genome sequence of Saccharomyces cerevisiae strain Kagoshima no. 2, which is used for brewing shōchū, a traditional distilled spirit in Japan. The genome data will facilitate an understanding of the evolutional traits and genetic background related to the characteristic features of strain Kagoshima no. 2.

scholarly journals Genome Sequence of Pseudomonas putida Strain ASAD, an Acetylsalicylic Acid-Degrading Bacterium

2017 ◽  
Vol 5 (41) ◽  
Author(s):  
Rebecca E. Parales ◽  
Rachita Navara ◽  
Rebecca Gettys ◽  
Jean J. Huang
Keyword(s):  
Energy Source ◽  
Acetylsalicylic Acid ◽  
Pseudomonas Putida ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Biodegradation Pathway ◽  
Degrading Bacterium ◽  
Insight Into

ABSTRACT Pseudomonas putida strain ASAD was isolated from compost because of its ability to utilize aspirin (acetylsalicylic acid) as a carbon and energy source. We report the draft genome sequence of strain ASAD, with an estimated length of 6.9 Mb. Study of this isolate will provide insight into the aspirin biodegradation pathway.

scholarly journals Draft Genome Sequence of Phenol-Degrading Variovorax boronicumulans Strain HAB-30

2020 ◽  
Vol 9 (7) ◽  
Author(s):  
Fatma Azwani Abdul Aziz ◽  
Kenshi Suzuki ◽  
Ryota Moriuchi ◽  
Hideo Dohra ◽  
Yosuke Tashiro ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Aromatic Compounds ◽  
Metabolic Pathways ◽  
Chemostat Culture ◽  
Phenol Degradation ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Degradation Pathways ◽  
Content Type ◽  
Genes Encoding

We report the draft genome sequence of Variovorax boronicumulans strain HAB-30, which was isolated from a phenol-degrading chemostat culture. This strain contains genes encoding a multicomponent type of phenol hydroxylase, with degradation pathways for catechol and other aromatic compounds. The genome sequence will be useful for understanding the metabolic pathways involved in phenol degradation.

scholarly journals Draft Genome Sequence of Paucibacter aquatile CR182 T , a Strain with Antimicrobial Activity Isolated from Freshwater of Nakdong River in South Korea

2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Eu Jin Chung ◽  
Gang-Guk Choi ◽  
Young-Ho Nam ◽  
Ahyoung Choi
Keyword(s):  
Genome Sequence ◽  
Genetic Basis ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Nakdong River ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Genome Data ◽  
Adaptive Mechanisms

ABSTRACT This report details a draft genome sequence of Paucibacter aquatile CR182 T , isolated from river water, which contains 5,523,543 bp, has a G+C content of 66.3%, and harbors 4,544 protein-coding genes in 4 contigs. These genome data provide insights into the genetic basis of this strain’s antibacterial activity and adaptive mechanisms.

scholarly journals Draft Genome Sequence of Deefgea sp. Strain CFH1-16, Isolated from the Intestine of the Freshwater Fish Hypomesus nipponensis

2021 ◽  
Vol 10 (19) ◽  
Author(s):  
Ji-Hye Han
Keyword(s):  
Freshwater Fish ◽  
Genome Sequence ◽  
Draft Genome ◽  
Republic Of Korea ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Genome Data ◽  
Fish Intestine ◽  
The Republic

ABSTRACT Reported here is the draft genome sequence of Deefgea sp. strain CFH1-16, isolated from the intestine of a Hypomesus nipponensis fish collected from the Republic of Korea. The genome sequence was assembled into two contigs with 48.2% G+C content. These genome data could improve our understanding of adaptation in the fish intestine.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

Sign in / Sign up

Export Citation Format

Share Document