scholarly journals Draft Genome Sequence of Streptococcus salivarius AGIRA0003, Isolated from Functional Gastrointestinal Disorder Duodenal Tissue

2021 ◽  
Vol 10 (39) ◽  
Author(s):  
Emily C. Hoedt ◽  
Erin R. Shanahan ◽  
Simon Keely ◽  
Ayesha Shah ◽  
Grace L. Burns ◽  
...  
Keyword(s):  
Functional Dyspepsia ◽  
Genome Sequence ◽  
Relative Abundance ◽  
Draft Genome ◽  
Gastrointestinal Disorder ◽  
Functional Gastrointestinal Disorder ◽  
Streptococcus Salivarius ◽  
Genomic Features ◽  
Content Type ◽  
Dyspeptic Symptoms

Patients suffering functional dyspepsia symptoms have been shown to possess a greater relative abundance of Streptococcus compared to asymptomatic controls. Here, we describe the isolation and genomic features of a new Streptococcus isolate, from the duodenal tissue of a subject reporting dyspeptic symptoms, taxonomically assigned to Streptococcus salivarius and designated strain AGIRA0003.

scholarly journals Genome Sequence of the Bacteriocin-Producing Oral Probiotic Streptococcus salivarius Strain M18

2011 ◽  
Vol 193 (22) ◽  
pp. 6402-6403 ◽  
Author(s):  
Nicholas C. K. Heng ◽  
Nurul S. Haji-Ishak ◽  
Alaina Kalyan ◽  
Andrew Y. C. Wong ◽  
Marija Lovrić ◽  
...  
Keyword(s):  
Oral Cavity ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Streptococcus Salivarius ◽  
Gram Positive ◽  
Content Type ◽  
Human Oral Cavity

Streptococcus salivarius is a Gram-positive bacterial commensal and pioneer colonizer of the human oral cavity. Many strains produce ribosomally synthesized proteinaceous antibiotics (bacteriocins), and some strains have been developed for use as oral probiotics. Here, we present the draft genome sequence of the bacteriocin-producing oral probiotic S. salivarius strain M18.

scholarly journals Draft Genome Sequence of Collimonas pratensis Strain PMB3(1), an Effective Mineral-Weathering and Chitin-Hydrolyzing Bacterial Strain

2020 ◽  
Vol 9 (37) ◽  
Author(s):  
Laura Picard ◽  
Philippe Oger ◽  
Marie-Pierre Turpault ◽  
Stéphane Uroz
Keyword(s):  
Antifungal Activity ◽  
Genome Sequence ◽  
Draft Genome ◽  
Mineral Weathering ◽  
Draft Genome Sequence ◽  
Genomic Features ◽  
Content Type ◽  
Scleroderma Citrinum ◽  
Plant Growth Promoting ◽  
Growth Promoting

ABSTRACT We announce the draft genome sequence of Collimonas pratensis PMB3(1), isolated from the Scleroderma citrinum mycorrhizosphere. In addition to its mineral-weathering effectiveness and antifungal activity, this strain is characterized by genomic features that give it great potential as a biocontrol and plant growth-promoting agent in nutrient-poor soils.

scholarly journals Draft Genome Sequence of the Lantibiotic-Producing Strain Streptococcus salivarius HS0302

2019 ◽  
Vol 8 (1) ◽  
Author(s):  
Mengxin Geng ◽  
Peng Deng ◽  
Timothy Mire ◽  
Frank Austin ◽  
Leif Smith
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Streptococcus Salivarius ◽  
Content Type ◽  
Commensal Species ◽  
Mucosal Surfaces

Streptococcus salivarius is a prevalent commensal species of human oral mucosal surfaces. S. salivarius strain HS0302 produces the type AII lantibiotic salivaricin A2. Here, we report its draft genome sequence, revealing its potential to produce a variety of bacteriocins.

scholarly journals Draft Genome Sequence of the Acidophilic, Halotolerant, and Iron/Sulfur-Oxidizing Acidihalobacter prosperus DSM 14174 (Strain V6)

2017 ◽  
Vol 5 (3) ◽  
Author(s):  
Himel Nahreen Khaleque ◽  
Joshua P. Ramsay ◽  
Riley J. T. Murphy ◽  
Anna H. Kaksonen ◽  
Naomi J. Boxall ◽  
...  
Keyword(s):  
Genome Sequence ◽  
High Salinity ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Source Water ◽  
Genomic Features ◽  
Content Type ◽  
Iron Sulfur ◽  
Sulfur Oxidizing

ABSTRACT The principal genomic features of Acidihalobacter prosperus DSM 14174 (strain V6) are presented here. This is a mesophilic, halotolerant, and iron/sulfur-oxidizing acidophile that was isolated from seawater at Vulcano, Italy. It has potential for use in biomining applications in regions where high salinity exists in the source water and ores.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

scholarly journals Draft Genome Sequence of Pantoea sp. Strain A4, a Rafflesia-Associated Bacterium That ProducesN-Acylhomoserine Lactones as Quorum-Sensing Molecules

2012 ◽  
Vol 194 (23) ◽  
pp. 6610-6610 ◽  
Author(s):  
Kar-Wai Hong ◽  
Han Ming Gan ◽  
Siew-Moon Low ◽  
Patrick Kok Yuen Lee ◽  
Yee-Meng Chong ◽  
...  
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
First Time

ABSTRACTPantoeasp. strain A4 is a Gram-negative bacterium isolated from theRafflesiaflower. We present here, for the first time, the genome sequence ofRafflesia-associatedPantoeasp. strain A4, which exhibited quorum-sensing activity.

scholarly journals Draft Genome Sequence of the Iridescent Marine Bacterium Cellulophaga lytica CECT 8139

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Maylis Chapelais-Baron ◽  
Isabelle Goubet ◽  
Eric Duchaud ◽  
Eric Rosenfeld
Keyword(s):  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Physiological Properties

ABSTRACT Some species of the genus Cellulophaga have been reported as having biotechnological interests and noteworthy physiological properties. We report here the draft genome sequence of Cellulophaga lytica CECT 8139, a bacterium that produces an intensely iridescent colony biofilm on agar surfaces.

scholarly journals Draft Genome Sequence of a Clinical Isolate of Streptococcus mutans Strain HM

2017 ◽  
Vol 5 (33) ◽  
Author(s):  
Yoshio Kondo ◽  
Haruka Nishimata ◽  
Kiyoshi Hidaka ◽  
Tomoyuki Hasuwa ◽  
Hiroyuki Moriuchi ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Infective Endocarditis ◽  
Streptococcus Mutans ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Virulence Potential

ABSTRACT We report the draft genome sequence of Streptococcus mutans strain HM isolated from a 4-year-old girl with infective endocarditis. The genomics information will provide information on the genetic diversity and virulence potential of S. mutans strain HM.

scholarly journals Draft Genome Sequence of Enterococcus faecalis DD14, a Bacteriocinogenic Lactic Acid Bacterium with Anti-Clostridium Activity

2017 ◽  
Vol 5 (30) ◽  
Author(s):  
Yanath Belguesmia ◽  
Valérie Leclère ◽  
Matthieu Duban ◽  
Eric Auclair ◽  
Djamel Drider
Keyword(s):  
Lactic Acid ◽  
Lactic Acid Bacterium ◽  
Enterococcus Faecalis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Coding Sequences ◽  
Content Type ◽  
Gram Positive Bacteria ◽  
Healthy Newborn

ABSTRACT We report the draft genome sequence of Enterococcus faecalis DD14, a strain isolated from meconium of a healthy newborn at Roubaix Hospital (France). The strain displayed antagonism against a set of Gram-positive bacteria through concomitant production of lactic acid and bacteriocin. The genome has a size of 2,893,365 bp and a 37.3% G+C ratio and is predicted to contain at least 2,755 coding sequences and 62 RNAs.

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