Towards a better understanding of the genus Sciurella Allman, 1883 (Cnidaria: Hydrozoa: Plumulariidae): evidence from an integrative study

Zootaxa ◽  
2021 ◽  
Vol 5040 (1) ◽  
pp. 1-32
Author(s):  
HORIA R. GALEA ◽  
DAVIDE MAGGIONI ◽  
CRISTINA G. DI CAMILLO

The genus Sciurella Allman, 1883 is reassessed based on fertile specimens from Indonesia and Australia, using both morphological and genetic approaches. The genus is resurrected and kept distinct from Nemertesia Lamouroux, 1812 on the account of its long, tubular hydrothecae, and the gonothecae (of which only the female ones are known) provided with nematothecae. Stellate gonothecae correspond to S. indivisa Allman, 1883, while urn-shaped gonothecae are subjectively attributable to S. cylindrica (Kirchenpauer, 1876), comb. nov., a nominal species originally described based on sterile material. The taxonomy of the latter species is discussed in light of the available literature data, and Antennularia cylindrica Bale, 1884 is confidently assigned to its synonymy. Plumularia dolichotheca Allman, 1883 is provisionally transferred to Sciurella, as S. dolichotheca comb. nov., pending the discovery of fertile specimens and reliable evidence from molecular studies. The newly-generated genetic data for S. indivisa and S. cylindrica clearly confirm the distinction between Sciurella and Nemertesia, the two genera occupying divergent positions within the Plumulariidae phylogenetic hypotheses.  

Zootaxa ◽  
2011 ◽  
Vol 2771 (1) ◽  
pp. 41 ◽  
Author(s):  
SARP KAYA ◽  
BATTAL CIPLAK

Among the Anatolian Tettigoniinae (Orthoptera, Tettigoniidae) the genera Anterastes, Koroglus, Sureyaella and Rhacocleis are distinguishable from the others by presence of one pair of spurs on the apico-ventral end of hind tibiae. The last two can be easily distinguished from the others by several distinct features, but the separation of the first two from each other is problematic. A new species described here provided opportunity of re-evaluating their taxonomy. The new species Anterastes antecessor sp. n. is described based on morphology, male calling song and genetic data. The taxonomy of Anterastes and Koroglus is rectified based on phylogentic hypotheses obtained from representative 16S rDNA haplotypes. Sureyaella bella, Parapholidoptera signata and Bolua turkiyae are used as out groups in different combinations to obtain a more stable phylogeny. Although analyses with different outgroups suggested the same topology, the phylogenetic tree with outgroups Parapholidoptera signata and Bolua turkiyae resulted with the highest bootstrap supports to the branches. Phylogenetic trees suggested the following relationships for the ingroup species; (A. antecessor sp. n. + ((Koroglus disparalatus + A. uludaghensis) + (A. turcicus + (A. niger + (A. ucari + A. babadaghi))) + ((A. tolunayi + (A. serbicus + A. antitauricus + A. burri)))). Considering the phylogenetic hypotheses and characters used in previous publications, Koroglus is put in synonymy with Anterastes, and a new combination is suggested for the only species of the former Anterastes disparalatus comb. n. A short remark is given about the characters used in the generic taxonomy of the group.


Author(s):  
James P. Hereward ◽  
Tobias J. Smith ◽  
Ros Gloag ◽  
Dean R. Brookes ◽  
Gimme H. Walter

AbstractDiscrepancies in mitochondrial and nuclear genetic data are often interpreted as evidence of hybridisation. We re-examined reports of hybridisation in three cryptic stingless bee species in the genus Tetragonula in South East Queensland, Australia (T. carbonaria, T. davenporti, and T. hockingsi). Previous studies on this group using microsatellite markers proposed that occasional hybrids are found. In contrast, we find that allele frequencies at neutral regions of the nuclear genome, both microsatellites and random snps, reliably separated the three species, and thus do not support hybridisation. We found no inter-species variation in PCR amplicons of the nuclear gene EF1alpha, but low and moderate species-specific polymorphisms in the nuclear gene Opsin and the mitochondrial 16S respectively, with no cases of mito-nuclear discordance at these genes. We confirm that nuclear divergence between these species is low, based on 10-26kb of non-coding sequence flanking EF1alpha and Opsin (0.7-1% pairwise difference between species). However, we find mitogenomes to be far more diverged than nuclear genomes (21.6-23.6% pairwise difference between species). Based on these comprehensive analyses of multiple marker types, we conclude that there is no ongoing gene flow in the Tetragonula species of South East Queensland, despite their high morphological similarity to one another and the low nuclear divergence among them. The mitogenomes and draft nuclear genomes provided for these species will be a resource for further molecular studies on this group, which are important pollinators in Australian natural and agroecosystems.


Zootaxa ◽  
2021 ◽  
Vol 5004 (3) ◽  
pp. 401-429
Author(s):  
HORIA R. GALEA ◽  
DAVIDE MAGGIONI

Ten species belonging to the genus Gonaxia Vervoort, 1993 occur in recent collections gathered by KANACONO (2016), KANADEEP (2017) and KANADEEP 2 (2019) expeditions of the French Tropical Deep-Sea Benthos Program in deep waters of the New Caledonian region. They were studied using the classical, morphological approach, supplemented by the first genetic characterization of the genus undertaken so far. Two species are previously undescribed, namely G. incisa Galea, sp. nov. and G. solenoscyphoides Galea, sp. nov. Additional notes on the remaining species are provided, notably the discovery of the female gonothecae of G. crassicaulis Vervoort, 1993 and G. perplexa Vervoort, 1993. Lofty colonies, with distinctive cladia-bearing branches spirally-arranged around the stem, assignable to the recently-described G. plumularioides Galea, 2016 actually represent fully-developed colonies of G. errans Vervoort, 1993, as demonstrated using molecular markers, the latter nominal species having priority. Its unusual, club-shaped, longitudinally-ridged gonothecae, fully free from the stem, are described for the first time. Supplementary notes on the hydrotheca of G. crassicaulis Vervoort, 1993 are provided, together with the description of a distinctive gutter of perisarc channeling the coenosarc of the colony along the lumen of both the stem and cladia. A multi-locus phylogenetic hypothesis of the Macrocolonia supports the establishment of the family Gonaxiidae Maggioni, fam. nov., to accommodate the species dealt with herein.


2004 ◽  
Vol 94 (6) ◽  
pp. 537-553 ◽  
Author(s):  
R.E. Harbach

AbstractThe internal classification of genus Anopheles is updated to reflect taxonomic actions published since the classification was last reviewed in 1994. Both formal and informal taxa are included. The classification is intended to aid researchers and students who are interested in analysing species relationships, making group comparisons and testing phylogenetic hypotheses. The genus includes 444 formally named and 40 provisionally designated extant species divided between six subgenera: Anopheles, Cellia, Kerteszia, Lophopodomyia, Nyssorhynchus and Stethomyia. Subgenera Anopheles, Cellia and Nyssorhynchus are subdivided hierarchically into nested informal groups of morphologically similar species that are believed to represent monophyletic lineages based on morphological similarity. Changes to the classification include additional species, eliminated species and changes to the hierarchical organization and composition of supraspecific groups, some as a result of molecular studies.


1997 ◽  
Vol 71 (4) ◽  
pp. 305-310 ◽  
Author(s):  
D. Blair ◽  
T. Agatsuma ◽  
T. Watanobe

AbstractThe Paragonimus ohirai group, named after P. ohirai Miyazaki, 1939, consists of three nominal species. Paragonimus iloktsuenensis Chen, 1940 and P. sadoensis Miyazaki et al., 1968, the other members of the group, were proposed primarily because of perceived differences in metacercarial morphology and/or host preferences. It has long been recognized that adults of the three were virtually indistinguishable. With the application of genetic techniques, it has become clear that the three forms can exchange genes freely, and that differences in metacercarial morphology constitute a polymorphism probably due to a single gene inherited in Mendelian fashion. Here, additional genetic data (DNA sequences from the second internal transcribed spacer of the nuclear ribosomal gene cluster and from the mitochondrial cytochrome c oxidase subunit I gene) are presented in support of the synonymy.


Genome ◽  
1995 ◽  
Vol 38 (1) ◽  
pp. 1-7 ◽  
Author(s):  
Yutaka Nishioka

The house mouse is one of the model organisms in genetics and more than 400 inbred strains have been established. However, many of the strains are related and their ancestry can be traced back to European fancy mice inbred in the 1920s. Recent molecular studies corroborate the early historical records that assert that Japanese fancy mice were introduced into European stocks and thus contributed to the development of "old" inbred strains. Consequently, many inbred strains have genomic DNA derived from more than one subspecies of Mus musculus. The subspecific hybrid origin of common inbred strains has important bearings on the interpretation of genetic data, and the limitations that history imposes upon the currently available strains make it necessary to establish new inbred strains representing specific wild populations.


Author(s):  
Quentin Jossart ◽  
Marc Kochzius ◽  
Bruno Danis ◽  
Thomas Saucède ◽  
Camille V E Moreau

Abstract An integrative approach is crucial in discrimination of species, especially for taxa that are difficult to identify based on morphological characters. In this study, we combine genetics and morphology to assess the diversity of Pterasteridae, a sea star family diversified in deep-sea and polar environments. Because of their derived anatomy and the frequent loss of characters during preservation, Pterasteridae are a suitable case for an integrative study. The molecular identification of 191 specimens (mostly from the Southern Ocean) suggests 26–33 species in three genera (Diplopteraster, Hymenaster and Pteraster), which match the morphological identification in 54–62% of cases. The mismatches are either different molecular units that are morphologically indistinguishable (e.g. Pteraster stellifer units 2 and 4) or, conversely, nominal species that are genetically identical (e.g. Hymenaster coccinatus/densus/praecoquis). Several species are shared between the Northern and Southern Hemispheres (e.g. Pteraster jordani/affinis). In conclusion, the taxonomic status of some groups is confirmed, but for others we find the need to re-evaluate the taxonomy at both genus and species levels. This work significantly increases the DNA barcode library of the Southern Ocean species and merges taxonomic information into an identification key that could become a baseline for future studies (pterasteridae-so.identificationkey.org).


Zootaxa ◽  
2010 ◽  
Vol 2696 (1) ◽  
pp. 1 ◽  
Author(s):  
KATHRIN S. R. BOLSTAD

Squids in the family Onychoteuthidae Gray, 1847, have been reported from every ocean but the Arctic, are taken frequently in deep-sea fisheries bycatch, and are ecologically important in the diets of many marine predators including cetaceans, pinnipeds, sharks, and seabirds. However, the diversity and systematics of the family have remained poorly understood. Of the 60+ nominal species, 12–14 have generally been accepted in recent studies. Challenges to clarity include insufficient species descriptions, original descriptions published in eight languages and often based solely on early life stages, non-designation or subsequent loss of type material, and the existence of several unresolved species complexes. In light of the general systematic disarray of the Onychoteuthidae, a global revision of the family follows, based on ~1500 specimens examined from 19 repositories. Type material has been examined wherever possible (although, for some species, photographs of type specimens, original illustrations, and/or the original descriptions have provided the only information available). For all 25 species treated in this revision, descriptions and illustrations are provided to a consistent standard that will enable their reidentification. External and internal morphological characters and states are described for subadult to adult stages of most species, with external characters reported through ontogeny as permitted by available material. Historically important characters are treated (general external morphology, body proportions, tentacle clubs, photophores, gladius, lower beak, radula), augmented by several more recently recognised characters (palatine teeth, detailed morphology of the tentacular hooks in adults, tentacular suckers in paralarvae, chromatophore patterns). The systematic value of both historical and new morphological characters at the generic and species levels is discussed; at all ontogenetic stages, tentacular club and hook morphology are considered the most valuable characters, although body proportions and gladius also prove useful. In the interest of systematic stability, neotypes are also designated for four species in which type specimens were not previously designated [Onykia (Onykia) loennbergii Ishikawa & Wakiya, 1914; Onychoteuthis borealijaponica Okada, 1927] or have been subsequently lost [Onykia (Onykia) carriboea Lesueur, 1821; Onykia (Onykia) robsoni Adam, 1962]. Partial resolution of the Onychoteuthis banksii complex has been possible in the Pacific and Atlantic Oceans, resulting in: the resurrection of Onychoteuthis bergii Lichtenstein, 1818, and Onychoteuthis aequimanus Gabb, 1868; the description of two new species in an earlier publication (Onychoteuthis lacrima Bolstad & Seki, and Onychoteuthis prolata Bolstad, Vecchione & Young, in Bolstad, 2008) and another herein, Onychoteuthis horstkottei sp. nov.; and the expansion of one species’ recognised distribution (Onychoteuthis compacta Berry, 1913) to include the Atlantic Ocean. The genus Moroteuthis Verrill, 1881, is considered a junior synonym of Onykia Lesueur, 1821, in accordance with the findings of several earlier authors. However, morphological differences in the species ‘Moroteuthis’ ingens Smith, 1881, necessitate the resurrection of the subgenus Moroteuthopsis Pfeffer, 1908, with all other Onykia species placed into the nominate subgenus Onykia (Onykia). Sexual dimorphism is reported in the beaks of Onykia (Moroteuthopsis) ingens (new comb.). Morphological and historical genetic data suggest a more distant relationship between Onykia and the species ‘Moroteuthis’ knipovitchi Filippova, 1972, than was suggested by earlier classifications. This species is therefore placed into Filippovia gen. nov., described herein. ‘Onykia’ rancureli (Okutani, 1981) and C. youngorum sp. nov. are placed into Callimachus gen. nov., according to morphological and genetic data. Given that the majority of available onychoteuthid material was collected after 1950, resulting in the descriptions of over half of the generally accepted genera and species since 1960, ongoing collection programmes are necessary to further resolve onychoteuthid systematics.


2006 ◽  
Vol 20 (3) ◽  
pp. 395 ◽  
Author(s):  
Lauren E. Helgen ◽  
Greg W. Rouse

Aporometra Clark, 1938, which belongs to the monotypic Aporometridae, is a crinoid genus endemic to temperate Australian waters. It has been described as being ‘viviparous’ and is among the smallest of comatulids. The small size of specimens, and poor morphological justifications for specific diagnoses have created uncertainty over the number of species in the genus and their distributions. This study identified a suite of characters using data from scanning electron microscopy and mtDNA sequencing (CO1 and ND2) to assess the number of species of Aporometra. Specimens were obtained from museums and collected from Western Australia, South Australia, Victoria and New South Wales. Type material was also examined when possible. Phylogenetic hypotheses were generated using maximum parsimony-based analyses of the separate and combined datasets. The results support the monophyly of Aporometra and the presence of two species, Aporometra wilsoni (Bell, 1888) and Aporometra occidentalis A. H. Clark, 1938, along the southern Australian coast. The status of the third nominal species, Aporometra paedophora (H. L. Clark, 1909), remains to be resolved, but it may be a junior synonym of A. wilsoni. Morphological diagnoses are reviewed. Aporometra occidentalis was only found in Western Australia, while A. wilsoni was found from Western Australia to Victoria. Phylogeographic differentiation between the western and southern populations of A. wilsoni is briefly discussed.


Zootaxa ◽  
2019 ◽  
Vol 4712 (2) ◽  
pp. 151-201 ◽  
Author(s):  
JUAN D. DAZA ◽  
BRENDAN J. PINTO ◽  
RICHARD THOMAS ◽  
ALEXANDRA HERRERA-MARTINEZ ◽  
DANIEL P. SCANTLEBURY ◽  
...  

Studies of the Caribbean herpetofauna (amphibians and reptiles) have made significant contributions to our knowledge of evolutionary patterns and processes. A prerequisite for these studies are accurate taxonomies and robust phylogenetic hypotheses. One notable Caribbean radiation lacking such data are dwarf geckos of the genus Sphaerodactylus. Systematics of the Puerto Rican Sphaerodactylus have been turbulent since the initial species descriptions and no molecular phylogenies exist that include complete or near-complete taxon sampling. Here, we combine a multi-locus molecular phylogeny with extensive morphological information to investigate the current diversity of Sphaerodactylus geckos from the Puerto Rican Bank, with a large number of species from Hispaniola as an outgroup. In particular, we focus our efforts on resolving the taxonomy of the Sphaerodactylus macrolepis Günther species complex. We find S. macrolepis sensu lato (currently two nominal species with nine subspecies) is made up of at least four diagnosable species within two clades: (1) the sister species Sphaerodactylus macrolepis sensu stricto from the Virgin Islands (including St. Croix) and Culebra, and S. parvus King from islands in the northern Lesser Antilles; and (2) all other Sphaerodactylus macrolepis subspecies from Puerto Rico, Vieques, and Culebra. We resurrect Sphaerodactylus grandisquamis Stejneger from synonymy to refer to all subspecies from Puerto Rico and elevate the subspecies Sphaerodactylus inigoi Thomas & Schwartz for geckos from Vieques and western Culebra. The resulting phylogeny and revised taxonomy will be a useful tool for subsequent research into Sphaerodactylus conservation and evolution. 


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