Comparative Decay Rates of Human, Rhesus Macaque, Cynomolgus, and Porcine Activated Factor VIII.

Blood ◽  
2009 ◽  
Vol 114 (22) ◽  
pp. 3164-3164
Author(s):  
John F Healey ◽  
Ernest Parker ◽  
John (Pete) S. Lollar

Abstract Abstract 3164 Poster Board III-104 The proteolytic conversation by thrombin of factor VIII (fVIII) to fVIIIa produces a A1/A2/A3-C1-C2 heterotrimer that spontaneously dissociates into inactive A1/A3-C1-C2 and A2 species. Human mutations that increase the rate of A2 subunit dissociation produce hemophilia A, indicating that A2 subunit dissociation is physiologically relevant and is an important regulatory feature of the blood coagulation mechanism. The A2 subunit dissociation rate from human fVIIIa is significantly faster than the corresponding dissociation rates from porcine or murine fVIIIa. The fast decay rate of human fVIIIa raises the question whether the f8 gene is under positive selection for this trait. To determine whether fast A2 dissociation occurs elsewhere in the primate lineage, we cloned cDNAs encoding B-domain deleted (BDD) fVIII from rhesus macaque and cynomolgus monkey liver. The deduced BDD amino acid sequences of rhesus and cynomolgus fVIII were 97.9 % and 98% identical to human fVIII, respectively, and were 99.9% identical to each other. The expression of rhesus and cynomolgus fVIII from baby hamster kidney-derived cells was similar to human fVIII and ten-fold lower than porcine fVIII. BDD human, rhesus, cynomolgus, and porcine fVIII molecules were purified to homogeneity by tandem ion-exchange chromatography. Concentrations of the purified constructs were calculated using a molar extinction coefficient at 280 nm based on their predicted tyrosine, tryptophan and cysteine compositions. Human, rhesus, and cynomolgus fVIII displayed similar specific coagulant activities by one-stage coagulation assay (6800, 4500, and 5200 units per mg, respectively). The kinetics of decay of human, rhesus, cynomolgus and porcine fVIIIa were measured following rapid activation of 1 nM fVIII by thrombin using a chromogenic substrate assay of purified intrinsic fXase complex under conditions in which fVIIIa was limiting. Decay curves were fit using nonlinear least-squares regression to a first-order model (Fig. 1). Decay rate constants for rhesus and cynomolgus fVIIIa were similar (0.31 and 0.27 min-1, respectively) and were slightly, but significantly lower than human fVIIIa (0.40 min-1). In contrast, the decay rate constant for porcine fVIIIa, 0.17 min-1, was 2.3-fold lower than human fVIIIa, consistent with previous observations. These results suggest that fast A2 subunit dissociation rates evolved before evolution of the primate lineage. Disclosures No relevant conflicts of interest to declare.

Blood ◽  
2007 ◽  
Vol 110 (11) ◽  
pp. 1763-1763
Author(s):  
Hironao Wakabayashi ◽  
Philip J. Fay

Abstract Factor VIII circulates as a heterodimer composed of a heavy chain and light chain. Thrombin converts factor VIII into the active cofactor, factor VIIIa, by cleaving heavy chain into A1 and A2 subunits. While the A1 subunit maintains a stable interaction with the light chain-derived A3C1C2 subunit, the A2 subunit is weakly associated in the trimer and this low affinity interaction accounts for the instability of factor VIIIa activity. In examining the ceruloplasmin-based factor VIII A domain model, potential hydrogen bond pairings based upon spatial separations of <2.8Å were found between side chains of the A2 domain residues and residues in the A1 or A3 domain represented by residues D27, R282, E287, D302, S313, H317, Y476, T522, R531, N538, E540, S650, Y664, N684, N694, S695, D696, Y1786, S1791, Y1792, D1795, E1829, and S1949. Since hydrogen bonds at an interactive site contribute to structural stability, we performed a scanning mutagenesis study where these residues were individually replaced with Ala, except Tyr residues were replaced with Phe, in order to examine the contribution of each site to the stability of the factor VIII/VIIIa forms. Factor VIII activity decay was followed by incubating factor VIII (5 nM) at 55°C, and at indicated times removing an aliquot, activating with thrombin and measuring residual activity by a factor Xa generation assay. Factor VIIIa activity decay was measured by mixing factor VIII (5 nM) with factor IXa (40 nM), activating factor VIII with thrombin, and following factor Xase activity at 23°C by factor Xa generation. Non-linear least squares regression using a single exponential decay equation of activity versus time was performed to obtain rates for factor VIII/VIIIa activity decay. Eleven out of 23 factor VIII mutants showed increases in either or both decay rates by >2-fold compared to wild type (WT) (Figure). Of these mutants, R282A showed the largest increase in both factor VIII and VIIIa decay rates (∼30-fold compared to WT). Interestingly, 5 mutants (T522A, D1795A, Y1792F, Y1786F, and E1892A) showed >2-fold increased rates in factor VIIIa decay compared with the rates for factor VIII decay, whereas 2 mutants (N694A and Y664F) showed >2-fold increased rates in factor VIII decay compared with rates for factor VIIIa decay. These results suggest that several residues at the A1-A2 and A2-A3 domain interfaces contribute to stabilizing the protein through hydrogen bonding and that mutation at these sites result in loss of stability as determined by enhanced rates of activity decay. Furthermore, these results permit discrimination between stabilizing hydrogen bonding in the procofactor from active cofactor, where bonding in the latter appears to make a more significant contribution to stability. This observation is consistent with an altered conformation involving new inter-subunit interactions for the A2 domain following factor VIII activation. Factor VIII/FVIIIa Decay Rate Factor VIII/FVIIIa Decay Rate


Blood ◽  
2013 ◽  
Vol 122 (21) ◽  
pp. 3576-3576 ◽  
Author(s):  
Romy Kremers ◽  
Marie-Claire Kleinegris ◽  
Bas De Laat ◽  
Rob Wagenvoord ◽  
Coenraad Hemker

Abstract Introduction In liver cirrhosis patients antithrombin (AT) decreases proportionally to the severity of the disease and in a part of the cases approaches the dangerous levels of heterozygous AT deficiency (50%) associated with thrombosis risk. Moreover, α2Macroglobulin (α2M) has been reported to increase up to fourfold. We investigated in how far the decrease of AT was compensated by the simultaneous increase of α2M. Methods Thrombin decay was characterized in plasma samples from healthy controls (n=32) and liver cirrhosis patients (n=29) by measuring AT, α2M and fibrinogen levels as well as the overall thrombin inhibitory capacity of the plasma. Functional AT, α2M and fibrinogen levels were measured with in-house chromogenic assays and the von Clauss method respectively. The overall inhibitory capacity of a plasma sample (total thrombin decay rate) was obtained by triggering thrombin generation (TG) with 50 pM tissue factor and analysis of thrombin decay after prothrombin conversion was over (t = 3 min). From the same TG curves, the rate of thrombin decay by α2M was calculated, and thrombin decay by antithrombin was calculated as the difference between total and α2M-dependent thrombin decay. In addition, we used a validated computer model to predict thrombin decay in time based on measured plasma levels of AT, α2M and fibrinogen. This allows us to predict thrombin decay under conditions that do not exist in real patient populations, such as liver cirrhosis patients with decreased AT levels, but normal α2M levels. In this way we can quantify the potential protective effect of α2M increase during liver cirrhosis. Results Mean AT and α2M concentrations in the healthy control group were 2.01 μM (± 0.36 μM) and 3.34 μM (± 0.89 µM), respectively. In liver cirrhosis patients, the average AT level was significantly decreased (1.62 µM; p = 0.002) and the average α2M level was significantly increased (5.05 µM; p<0.001). In accordance, thrombin decay by α2M is significantly increased in liver cirrhosis patients (180% of control; p<0.001), whereas AT-dependent thrombin decay is significantly decreased (88% of control; p=0.009). The overall thrombin decay was not significantly altered in cirrhosis patients (95% of control; p=0.345), showing that α2M increase indeed compensates for AT decrease. However, in the subset of patients with AT<75% of normal, the rate of thrombin decay is significantly lower than in the control group (76%, p<0.001). Computer simulation of thrombin decay in this subset showed a similarity with the experimental curves to within the limit of experimental error. Replacing the values for the a2M concentration in individual liver cirrhosis patient samples by the average normal value reveals that the elevation in α2M levels increases the thrombin decay rate significantly (10%, p=0.016), but not enough to completely restore physiological thrombin decay rates (76%, p<0.001). Conclusion We show that thrombin decay in liver cirrhosis is substantially reduced by the decrease of plasma antithrombin levels, and that a simultaneous increase in α2M levels counteracts this effect. In liver cirrhosis patients with moderate AT loss (<25%) α2M increase fully compensates for AT deficiency, but in patients with severe AT deficiency (<75% of normal levels) this compensation is only partial. In conclusion, the increase of the plasma α2M concentration in liver cirrhosis can be considered to be a (partial) protective mechanism. Disclosures: No relevant conflicts of interest to declare.


1987 ◽  
Vol 42 (12) ◽  
pp. 1399-1401 ◽  
Author(s):  
A. Kiermeier ◽  
H. J. Neusser ◽  
E.W. Schlag

We present the first example of unimolecular decay rates of a polyatomic system in which reactants are rotational state selected. Highly excited, but internal energy selected and J rotational quantum number selected benzene cations are produced in a two laser pump-pump experiment. Slow reactive decay of these ions is observed in a reflectron time-of-flight mass spectrometer and the total decay rate constant k(E, J ) is measured as a function of J. At constant internal energy E, k(E, J) decreases with increasing J.


1995 ◽  
Vol 32 (2) ◽  
pp. 45-52 ◽  
Author(s):  
H. Z. Sarikaya ◽  
A. M. Saatçi

Total coliform bacteria have been chosen as the indicator organism. Coliform die-away experiments have been carried out in unpolluted sea water samples collected at about 100 m off the coastline and under controlled environmental conditions. The samples were transformed into one litre clean glass beakers which were kept at constant temperature and were exposed to the solar radiation. The membrane filter technique was used for the coliform analysis. The temperature ranged from 20 to 40° C and the dilution ratios ranged from 1/50 to 1/200. Coliform decay rate in the light has been expressed as the summation of the coliform decay rate in the dark and the decay rate due to solar radiation. The solar radiation required for 90 percent coliform removal has been found to range from 17 cal/cm2 to 40 cal/cm2 within the temperature range of 25 to 30° C. Applying the linear regression analysis two different equations have been given for the high (I&gt;10 cal/cm2.hour) and low solar intensity ranges in order to determine the coliform decay rate constant as a function of the solar intensity. T-90 values in the light have been found to follow log-normal distribution with a median T-90 value of 32 minutes. The corresponding T-90 values in the dark were found to be 70-80 times longer. Coliform decay rate in the dark has been correlated with the temperature.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
S. Pommé ◽  
K. Pelczar ◽  
K. Kossert ◽  
I. Kajan

AbstractThe 32Si decay rate measurement data of Alburger et al. obtained in 1982–1986 at Brookhaven National Laboratory have been presented repeatedly as evidence for solar neutrino-induced beta decay. The count rates show an annual sinusoidal oscillation of about 0.1% amplitude and maximum at February–March. Several authors have claimed that the annual oscillations could not be explained by environmental influences on the set-up, and they questioned the invariability of the decay constant. They hypothesised a correlation with changes in the solar neutrino flux due to annual variations in the Earth-Sun distance, in spite of an obvious mismatch in amplitude and phase. In this work, environmental conditions at the time of the experiment are presented. The 32Si decay rate measurements appear to be inversely correlated with the dew point in a nearby weather station. Susceptibility of the detection set-up to local temperature and humidity conditions is a likely cause of the observed instabilities in the measured decay rates. Similar conclusions apply to 36Cl decay rates measured at Ohio State University in 2005–2012.


Author(s):  
Dionisis Stefanatos ◽  
Emmanuel Paspalakis

Abstract We use optimal control theory to show that for a closed Λ-system where the excited intermediate level decays to the lower levels with a common large rate, the optimal scheme for population transfer between the lower levels is actually optical pumping. In order to obtain this result we exploit the large decay rate to eliminate adiabatically the weakly coupled excited state, then perform a transformation to the basis comprised of the dark and bright states, and finally apply optimal control to this transformed system. Subsequently, we confirm the optimality of the optical pumping scheme for the original closed Λ-system using numerical optimal control. We also demonstrate numerically that optical pumping remains optimal when the decay rate to the target state is larger than that to the initial state or the two rates are not very different from each other. The present work is expected to find application in various tasks of quantum information processing, where such systems are encountered


2013 ◽  
Vol 80 (1) ◽  
pp. 110-118 ◽  
Author(s):  
Adelumola Oladeinde ◽  
Thomas Bohrmann ◽  
Kelvin Wong ◽  
S. T. Purucker ◽  
Ken Bradshaw ◽  
...  

ABSTRACTUnderstanding the survival of fecal indicator bacteria (FIB) and microbial source-tracking (MST) markers is critical to developing pathogen fate and transport models. Although pathogen survival in water microcosms and manure-amended soils is well documented, little is known about their survival in intact cow pats deposited on pastures. We conducted a study to determine decay rates of fecal indicator bacteria (Escherichia coliand enterococci) and bovine-associated MST markers (CowM3, Rum-2-bac, and GenBac) in 18 freshly deposited cattle feces from three farms in northern Georgia. Samples were randomly assigned to shaded or unshaded treatment in order to determine the effects of sunlight, moisture, and temperature on decay rates. A general linear model (GLM) framework was used to determine decay rates. Shading significantly decreased the decay rate of theE. colipopulation (P< 0.0001), with a rate of −0.176 day−1for the shaded treatment and −0.297 day−1for the unshaded treatment. Shading had no significant effect on decay rates of enterococci, CowM3, Rum-2-bac, and GenBac (P> 0.05). In addition,E. colipopulations showed a significant growth rate (0.881 day−1) in the unshaded samples during the first 5 days after deposition. UV-B was the most important parameter explaining the decay rate ofE. colipopulations. A comparison of the decay behaviors among all markers indicated that enterococcus concentrations exhibit a better correlation with the MST markers thanE. coliconcentrations. Our results indicate that bovine-associated MST markers can survive in cow pats for at least 1 month after excretion, and although their decay dynamic differs from the decay dynamic ofE. colipopulations, they seem to be reliable markers to use in combination with enterococci to monitor fecal pollution from pasture lands.


2003 ◽  
Vol 3 (1-2) ◽  
pp. 209-214 ◽  
Author(s):  
J. Menaia ◽  
S.T. Coelho ◽  
A. Lopes ◽  
E. Fonte ◽  
J. Palma

Understanding chlorine residual decay kinetics and the factors that influence them are essential for such current tasks as siting chlorination facilities, dosage optimisation, choice of sampling locations and frequencies, and general design and operational control of drinking water networks, increasingly accomplished with the help of simulation models. Available constants for bulk chlorine decay are typically determined under static conditions. However, as for all fast reactions in water flows, chlorine consumption rates in drinking water pipes may be influenced by the existing mixing regimes, a function of flow turbulence, which is primarily controlled by flow velocity and pipe diameter. Flow velocities vary greatly in space and time in water transmission and distribution systems; pipe diameters are seldom uniform. Although both variables are readily available in the currently available network analysis simulators that implement chlorine models, such variations are not accounted for. Instead, a single preset decay rate constant is generally used for describing chlorine residual consumption throughout an entire system. In addition to highlighting how negligible PVC pipe wall chlorine consumption is, as such, this paper presents experimental evidence of a significant correlation between pipe flow velocity and bulk chlorine decay rates, and proposes a simple but effective approach to implement this dependency in current simulators.


2010 ◽  
Vol 27 (1) ◽  
pp. 86-93 ◽  
Author(s):  
Aldo Leal-Egaña ◽  
Aránzazu Díaz-Cuenca ◽  
Augustinus Bader

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