scholarly journals Persimmon anthracnose: a comparative study of aggressiveness on shoot and fruit among Colletotrichum horii isolates in southern Brazil

2020 ◽  
Vol 50 (10) ◽  
Author(s):  
Renato Rezende Young Blood ◽  
Thiago de Aguiar Carraro ◽  
Josiane Gomes Figueiredo ◽  
Louise Larissa May De Mio

ABSTRACT: The persimmon tree is known for its rusticity and productivity and was first introduced to Brazil in the late 19th century. However, anthracnose disease is causing immature fruit drop and severe disease symptoms in persimmon fruit, shoots, flowers, and twigs. The causal agent was first described as the fungal species, Colletotrichum horii, which was first confirmed using only the ITS region. In this study, we compared the aggressiveness of 13 isolates of Colletotrichum spp. obtained from fruit and shoots of persimmon grown in the Metropolitan Region of Curitiba, Paraná State, Brazil. A multilocus molecular analysis was carried out based on ITS, GPDH, and EF genes, and we confirmed that the isolates were confirmed as C. horii. All isolates were pathogenic for unwounded and wounded persimmon fruit but differed in aggressiveness. Only one isolate was non-pathogenic when inoculated into unwounded persimmon shoots. Most isolates caused cankers and shoot death whether shoots were wounded or unwounded. In this study, we emphasized the importance of shoots as a source of primary inoculum. In future studies, it will be critical to further elucidate the epidemiological basis of anthracnose disease by conducting field studies to establish a more effective strategy for disease control.

Plant Disease ◽  
2014 ◽  
Vol 98 (2) ◽  
pp. 279-279 ◽  
Author(s):  
B. S. Amaradasa ◽  
K. Amundsen

During the summer of 2011, foliar blight was observed on buffalograss (Buchloë dactyloides (Nutt.) Engelm.) lawns in Lincoln and Waverly, Nebraska. Disease symptoms were common when buffalograss was growing above 30°C and in drought conditions. Disease symptoms began as dark brown oblong leaf spots, followed by leaf tip dieback and eventual blighting of entire tillers. Leaf infections would progress into patches of thinning turf. Diseased leaf pieces were rinsed in distilled water and placed on 1.5% water agar. Two mitosporic fungal species having conidial morphology of Curvularia and Bipolaris were isolated. Colonies of Curvularia isolates grown on ¼× PDA at 25°C appeared velvety and dark greenish to grayish black after 1 week while Bipolaris cultures were brownish gray with olive green margins. The two species were identified as Curvularia inaequalis (Shear) Boedijn (1) and Bipolaris spicifera (Bainier) Subram. (2). Conidia of C. inaequalis were mostly straight to slightly curved, 17.4 to 37.1 × 7.2 to 12.6 (n = 24) μm, pale brown to brown, and three to four septate with scarcely protuberant hilum. Conidia of B. spicifera were 18.5 to 30.3 × 7 to 11.4 (n = 20) μm, ellipsoidal or oblong, light brown, 3-distoseptate with a flattened hilum. DNA confirmation was performed using one isolate of each of the two species. The rDNA-ITS region, amplified with ITS1: 5′-TCCGTAGGTGAACCTGCGG-3′ and ITS4: 5′-TCCTCCGCTTATTGATATGC-3′, and the gpd gene, amplified with gpd1: 5′-CAACGGCTTCGGTCGCATTG-3′ and gpd2: 5′-GCCAAGCAGTTGGTTGTGC-3′ (3) were used to confirm taxon of the isolates by comparing DNA sequences to those in GenBank. Our B. spicifera isolate Wv1Bss2 (Accession Nos. KC897667 [ITS] and KC928089 [gpd]) had >99.8% sequence identity to B. spicifera strain CCTU 245 (Accessions JX070077 and JX070078) while our C. inaequalis isolate Wv3YBss2 (GenBank Accession Nos. KC897663 [ITS] and KC928086 [gpd]) showed >98.6% sequence identity to strain ZM020029 (Accessions HM053665 and HM053653). Pathogenicity of the two species was tested on buffalograss cultivar Prestige. Stolons of Prestige were established in 10 cm square pots filled with Fafard 3B Mix potting medium. The pots of buffalograss were kept in a 30°C greenhouse with a 12-h photoperiod for 12 weeks. One isolate of each species representing each collection site (two isolates per each species) were cultured on ¼× PDA plates and conidial suspensions of 1.5 × 106 spores/ml in sterile water were prepared. Each isolate was inoculated to three pots of Prestige by spraying 15 ml of spore suspension per pot. Control pots of Prestige were sprayed with water. Pots were sealed in transparent plastic bags and every other day, opened for a few hours and plants sprayed with water to encourage infection. Isolates of C. inaequalis were more virulent with initial symptoms of foliar spots appearing 7 days after inoculation, followed by leaf tip dieback and necrosis of infected tillers. B. spicifera isolates induced similar symptoms 14 days after inoculation. Control pots were asymptomatic. C. inaequalis and B. spicifera were successfully re-isolated from symptomatic tissue, completing Koch's postulates. To our knowledge, this is the first report of identification of foliar blight causal pathogens on buffalograss in Nebraska. References: (1) A. Sivanesan. Mycol. Pap. 158:1, 1987. (2) H. M. Koo et al. Plant Pathol. J. 19:133, 2003. (3) M. L. Berbee et al. Mycologia 91:964, 1999.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Ammarah Hami ◽  
Rovidha S. Rasool ◽  
Nisar A. Khan ◽  
Sheikh Mansoor ◽  
Mudasir A. Mir ◽  
...  

AbstractChilli (Capsicum annuum L.) is one of the most significant vegetable and spice crop. Wilt caused by Fusarium Sp. has emerged as a serious problem in chilli production. Internal transcribed spacer (ITS) region is widely used as a DNA barcoding marker to characterize the diversity and composition of Fusarium communities. ITS regions are heavily used in both molecular methods and ecological studies of fungi, because of its high degree of interspecific variability, conserved primer sites and multiple copy nature in the genome. In the present study we focused on morphological and molecular characterization of pathogen causing chilli wilt. Chilli plants were collected from four districts of Kashmir valley of Himalayan region. Pathogens were isolated from infected root and stem of the plants. Isolated pathogens were subjected to DNA extraction and PCR amplification. The amplified product was sequenced and three different wilt causing fungal isolates were obtained which are reported in the current investigation. In addition to Fusarium oxysporum and Fusarium solani, a new fungal species was found in association with the chilli wilt in Kashmir valley viz., Fusarium equiseti that has never been reported before from this region. The studies were confirmed by pathogenicity test and re-confirmation by DNA barcoding.


2002 ◽  
Vol 27 (6) ◽  
pp. 639-643 ◽  
Author(s):  
RITA C. B. WEIKERT-OLIVEIRA ◽  
M. APARECIDA DE RESENDE ◽  
HENRIQUE M. VALÉRIO ◽  
RACHEL B. CALIGIORNE ◽  
EDILSON PAIVA

Twenty isolates of four fungal species, agents of "Helminthosporium" diseases in cereals, were collected from different regions: nine Bipolarisoryzae isolated from rice (Oryza sativa), seven B.sorokiniana from wheat (Triticum aestivum), two B. maydis, and two Exserohilumturcicum from maize (Zea mays). The strains were compared by PCR-RFLP and RAPD analysis. Size polymorphism among the isolates in the ITS region comprising the 5.8 S rDNA indicated genetic differences among the isolates, while a UPGMA phenogram constructed after the digestion of this region with restriction enzymes showed inter- and intra-specific polymorphism. The RAPD profiles indicated an expressive level of polymorphism among different species, compared with a low level of polymorphism among isolates of the same species. A UPGMA phenogram grouped the isolates according to the species and their host plant. RAPD profiles did not reveal polymorphism that directly correlated climatic factors with geographic source of the isolates of B. sorokiniana, and B. oryzae. Teleomorphic species revealed high similarity with their correspondent anamorphs.


2018 ◽  
Vol 84 (12) ◽  
Author(s):  
David Buckley ◽  
Muthu Dharmasena ◽  
Angela Fraser ◽  
Charles Pettigrew ◽  
Jeffery Anderson ◽  
...  

ABSTRACTCarpets and other soft surfaces have been associated with prolonged and reoccurring human norovirus (HuNoV) outbreaks. Environmental hygiene programs are important to prevent and control HuNoV outbreaks. Despite our knowledge of HuNoV transmission via soft surfaces, no commercially available disinfectants have been evaluated on carpets. Our aim was to adapt a current standardized method for virucidal testing by assessing two disinfection technologies, silver dihydrogen citrate (SDC) and steam vapor, against one HuNoV surrogate, feline calicivirus (FCV), on wool and nylon carpets. First, we evaluated the effect of both technologies on the appearance of carpet. Next, we evaluated the efficacy of SDC in suspension and the efficacy of SDC and steam vapor against FCV on a glass surface, each with and without serum. Lastly, we tested both technologies on two types of carpet, wool and nylon. Both carpets exhibited no obvious color changes; however, SDC treatments left a residue while steam vapor left minor abrasions to fibers. SDC in suspension and on glass reduced FCV by 4.65 log10and >4.66 log10PFU, respectively, but demonstrated reduced efficacy in the presence of serum. However, SDC was only efficacious against FCV on nylon (3.62-log10PFU reduction) and not wool (1.82-log10PFU reduction). Steam vapor reduced FCV by >4.93 log10PFU on glass in 10 s and >3.68 log10PFU on wool and nylon carpet carriers in 90 s. There was a limited reduction of FCV RNA under both treatments compared to that of infectivity assays, but RNA reductions were higher in samples that contained serum.IMPORTANCEHuman noroviruses (HuNoV) account for ca. 20% of all diarrheal cases worldwide. Disease symptoms may include diarrhea and vomit, with both known to contribute to transmission. The prevention and control of HuNoV are difficult because they are environmentally resilient and resistant to many disinfectants. Several field studies have linked both hard and soft surfaces to HuNoV outbreaks. However, many disinfectants efficacious against HuNoV surrogates are recommended for hard surfaces, but no commercially available products have demonstrated efficacy against these surrogates on soft surfaces. Our research objectives were to evaluate liquid and steam-based technologies in suspension and on hard surface carriers in addition to adapting and testing a protocol for assessing the virucidal effects of disinfection technologies on carpet carriers. These results will inform both the government and industry regarding a standard method for evaluating the virucidal effects of disinfectants on carpet while demonstrating their efficacy relative to suspension and hard-surface tests.


Plant Disease ◽  
2022 ◽  
Author(s):  
Liu Yang ◽  
Tian Yuan ◽  
Xia Zhao ◽  
Yue Liang ◽  
UWAREMWE CONSTANTINE ◽  
...  

Root rot is a serious disease in plantations of A. sinensis, severely affecting yield and quality and threatening sustainable production. Fusarium isolates (n=32) were obtained from field samples of root rot tissue, leaves and infected soil. Isolates were identified by comparing the sequences of their internal transcribed spacer (ITS) region and translation elongation factor 1-ɑ (TEF-1ɑ) to sequences of known species in the NCBI-database. These Fusarium isolates include F. tricinctum (43.75%), F. equiseti (31.25%), F. solani (9.37%), F. oxysporum (6.25%), F. acuminatum (6.25%), and F. incarnatum (3.12%). For pathogenicity testing under greenhouse conditions, seven isolates were selected based on a phylogenetic analysis, including four strains of F. tricinctum and one strain each of F. solani, F. oxysporum, and F. acuminatum. The seven isolates were all pathogenic but differed in their ability to infect: the four F. tricinctum strains were capable pathogens causing root rot in A. sinensis at 100% incidence and the highly aggressive. Furthermore, the symptoms of root rot induced by those seven isolates were consistent with typical root rot cases in the field, but their disease severity varied. Observed histopathological preparations of F. tricinctum-infected seedlings and tissue-slides results showed this fungal species can penetrate epidermal cells and colonize the cortical cells where it induces necrosis and severe plasmolysis. Plate confrontation experiments showed that isolated rhizosphere bacteria inhibited the Fusarium pathogens that cause root rot in A. sinensis. Our results provide timely information for informing the use of biocontrol agents for suppression of root rot disease.


Plant Disease ◽  
2021 ◽  
Author(s):  
Paul Daly ◽  
Yifan Chen ◽  
Qimeng Zhang ◽  
Hongli Zhu ◽  
Jingjing Li ◽  
...  

Pythium soft rot is a major soil-borne disease of crops such as ginger (Zingiber officinale). Our objective was to identify which Pythium species were associated with Pythium soft-rot of ginger in China, where approximately 20% of global ginger production is from. Oomycetes infecting ginger rhizomes from seven provinces were investigated using two molecular markers, the internal transcribed spacer (ITS) and cytochrome c oxidase subunit II (CoxII). In total, 81 isolates were recovered and approximately 95% of the isolates were identified as Pythium myriotylum and the other isolates were identified as either P. aphanidermatum or P. graminicola. Notably, the P. myriotylum isolates from China did not contain the SNP in the CoxII sequence found previously in the P. myriotylum isolates infecting ginger in Australia. A subset of 36 of the isolates was analyzed repeatedly by temperature-dependent growth, severity of disease on ginger plants and aggressiveness of colonization of ginger rhizome sticks. In the pathogenicity assays, 32/36 of the isolates were able to significantly infect and cause severe disease symptoms on the ginger plants. A range of temperature-dependent growth, disease severity and aggressiveness in colonization was found with a significant moderate positive correlation between growth and aggressiveness of colonization of the ginger sticks. This study identified P. myriotylum as the major oomycete pathogen in China from infected ginger rhizomes and suggests that P. myriotylum should be a key target to control soft rot of ginger disease.


Botany ◽  
2019 ◽  
Vol 97 (9) ◽  
pp. 475-785
Author(s):  
Véronique B. Cloutier ◽  
Yves Piché ◽  
J. André Fortin ◽  
Jean. A. Bérubé ◽  
Hélène Glémet ◽  
...  

We developed a method combining passive baiting (animals that are not trapped) with DNA meta-barcoding of the feces acquired, to study fungi in the diet of small mammals. Mammal and fungal species were identified using genomic DNA of 596 fecal samples collected in five regions of the eastern Canadian boreal forest. For identification of the small mammal species, the cytochrome b region was used. A total of eight species of small mammals displayed hypogeous fungi consumption, with northern flying squirrels (Glaucomys sabrinus) and red-backed voles (Myodes gapperi) as the top consumers. For identification of their fungal diets, the ribosomal internal transcribed spacer (ITS) region was used. We recovered 722 taxa of Ascomycota, 429 Basidiomycota, 81 Zygomycota, 4 Chytridiomycota, 1 Glomeromycota, and 44 unidentified fungal taxa. Of these, 28 were hypogeous sequestrate fungi (underground fructification), which presumably are dug out by small mammals for consumption. Otherwise, for the remaining fungi [epigeous (above ground fructification) or microscopic fungal species], it is unclear which ones are selected by the animal as a dietary source or result from incidental contamination. Our paper presents a promising approach for tracing mycophagy in small mammals, and our results suggest that fungal diversity is important for the diet of some small mammals.


1986 ◽  
Vol 26 (4) ◽  
pp. 431 ◽  
Author(s):  
MJ Barbetti

In field studies we monitored the effects of time of season, trash and fungicides on the populations of fungi associated with leaves and petioles of newly sown subterranean clover, particularly in relation to the development of disease symptoms. These effects were compared with the fungal population changes occurring in a nearby established subterranean clover pasture. A range of fungi, notably Leptosphaerulina trifolii, Phoma medicaginis and Stemphylium globuliferum, were found to colonise subterranean clover cotyledons, leaves and petioles readily throughout the growing season from as early as 1 week after emergence. The incidence of L. trifolii and S. globuliferum was reasonably consistent throughout the growing season. Alternaria spp., Cladosporium spp., Myrothecium verrucaria, P. medicaginis and Trichoderma spp. were more prevalent later in the season. Fusarium avenaceum and other Fusarium spp. were more prevalent early in the season, while Pithomyces chatarum and S. botryosum were more prevalent midseason. The fungi isolated showed no ability, under the conditions of this investigation, to cause disease, and there was no correlation between fungi isolated and disease symptoms observed. The incidence of several fungi, especially L. trifolii and P. medicaginis, was greatly increased by the presence of trash from the previous season but was greatly decreased by regular applications of fungicide.


Plant Disease ◽  
2002 ◽  
Vol 86 (5) ◽  
pp. 515-520 ◽  
Author(s):  
Zhonghua Ma ◽  
Themis J. Michailides

Botryosphaeria panicle and shoot blight of pistachio, caused by Fusicoccum sp. is a destructive disease in California. In this study, a pair of group-specific polymerase chain reaction (PCR) primers BDI and BDII, was developed for identification of Fusicoccum sp. from pistachio and other hosts in California based on the sequences of the rDNA internal transcribed spacer (ITS) region. The primers amplified a 356-bp DNA fragment for all 73 tested isolates of Fusicoccum sp. collected from pistachio and other hosts throughout California in different years, but not for the other 33 fungal species isolated from pistachio and the eight isolates of Fusicoccum sp. obtained from pistachio trees in Greece. The PCR assay using this pair of primers was sensitive enough to detect 5 pg of genomic DNA of Fusicoccum sp. A simple DNA extraction procedure was developed that led to the rapid identification of Fusicoccum sp. from pistachio and other host plants in California.


2014 ◽  
Vol 23 (2) ◽  
pp. 127-133
Author(s):  
Md Junayed Ahmed ◽  
KS Hossain ◽  
MA Bashar

The incidence of anthracnose disease was observed lowest in December (10.87%) and highest in July (80.50%) at the three selected betel vine fields of Shalon village in Moulvibazar district. The young stems were found more prone to attack than the old ones. Pathogenicity test showed Colletotrichum dematium and C. gloeosporioides produced characteristic disease symptoms on betel stems. Among them C. dematium is a new document as a pathogen of anthracnose of betel vine. Out of five fungicides, complete inhibition of both the pathogens in vitro occurred with corozole EC (25% propiconazole), folicur EC (25% tebuconazole) and trooper WP (75% tricyclazole). Among the four antagonistic fungi, Penicillium sp. showed more antagonistic potentiality against the pathogens. DOI: http://dx.doi.org/10.3329/dujbs.v23i2.20092 Dhaka Univ. J. Biol. Sci. 23(2): 127-133, 2014


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