scholarly journals Analysis of linear description of type traits in the varieties and studs of the Old Kladrub horse

2008 ◽  
Vol 52 (No. 9) ◽  
pp. 299-307 ◽  
Author(s):  
V. Jakubec ◽  
M. Rejfková ◽  
J. Volenec ◽  
I. Majzlík ◽  
L. Vostrý
Keyword(s):  
Genetic Diversity ◽  
Coefficient Of Variation ◽  
Fixed Effects ◽  
Side View ◽  
Linear Description ◽  
Type Traits ◽  
Chest Girth ◽  
The Given ◽  
Very High ◽  
Selection Of

An evaluation of the linear description of type in 494 horses of the Old Kladrub breed for 32 traits was used to analyse the effect of variety, stud, sex, year of birth and age at description. A linear model with fixed effects was used. The highest coefficient of variation was calculated for the forelimb side-view (40.14%), chest girth (36.25%) and height at withers (30.97%). 28 out of 32 traits were in the range from 7 to 9 utilized scores. The descriptor used a very high number of scores of the scale. Significant differences between both varieties were found in 13 out of 32 traits. Significant differences were found in 12 out of 32 traits between the Kladruby stud farm and the private studs. There is no reasonable explanation of this fact. A significant variety × stud interaction was recorded in only 7 traits. Significant differences between stallions and mares were recorded in a large number of front and body traits (in 11 out of 18 traits) and in 2 rear traits. Despite of a remarkable number of significant differences between the years of birth (in 18 out of 32 traits) and age at description (in 13 out of 32 traits) both factors are not the important ones for the selection of horses according to the type traits. The description of type traits, performance recording and selection are carried out in the population of four-years-old horses born in the given year. The age at description does not play a role because all horses are now described each year at a standard age of four years. The linear description of type is an important tool for the breeding and conservation of genetic diversity within the breed.

scholarly journals Effect of Linear Type Traits Influences on Survivability and Longevity of Sahiwal Cattle

2021 ◽  
Author(s):  
Anupam Soni ◽  
Sharad Mishra ◽  
A.K. Santra ◽  
V.N. Khune ◽  
Nishma Singh ◽  
...  
Keyword(s):  
International Committee ◽  
Side View ◽  
Intermediate Type ◽  
Cattle Breeding ◽  
Linear Type ◽  
Average Value ◽  
Sahiwal Cattle ◽  
Type Traits ◽  
The One ◽  
Selection Of

Background: The linear type traits are the one of important tools for selection of milch cattle. The lifespan of cattle mostly depends on these linear type traits particularly feet and udder related traits. So it is necessary to measure the linear type traits and effect on longevity of Sahiwal cattle. Methods: The experiment was conducted on 86 Sahiwal cattle maintained in Bull mother experimental farm and government cattle breeding farm, Anjora, Durg (C.G.). The linear type traits in Sahiwal cattle were measured as per the recommendation of International committee for animal recording (ICAR). Result: The different linear type traits were studied the average value of stature 125.39±0.534, Chest width 27±0.49, rump angle 12.75±0.97, rump width 17.32±0.29, rear leg set (side view) 146.03°±0.91, rear leg set (rear view) -3.74±0.15, udder depth 18.97±0.43, udder cleft 2.77±0.95, rear udder height 24.06±0.45, fore udder attachment 130.50±1.75° and front teat position 3.61±0.13 cm. these linear type traits mainly affects the longevity and survivability of Sahiwal herds. The most of the traits were found to be intermediate type it leads to increase the longevity and fewer reproductive problems in the Sahiwal herds.

scholarly journals Selection in the genetic resource: genetic variation of the linear described type traits in the Old Kladrub horse

2009 ◽  
Vol 52 (4) ◽  
pp. 343-355 ◽  
Author(s):  
V. Jakubec ◽  
L. Vostrý ◽  
W. Schlote ◽  
I. Majzlík ◽  
K. Mach
Keyword(s):  
Coefficient Of Variation ◽  
Selection Criteria ◽  
Genetic Resource ◽  
Effective Population ◽  
Average Heterozygosity ◽  
Linear Type ◽  
Current State ◽  
Type Traits ◽  
Chest Girth ◽  
Deviation Coefficient

Abstract. The structure of the breed in 2003 was: 39 sires and 350 dams. The breed was closed against immigration in 1992. In 1993 and 2003 coefficients of inbreeding (Fx) were calculated from 5 parental generations for sires and dams in the whole breed and white and black variety. From 1993 to 2003 decreased the Fx (%) in the breed for stallions from 5.65 to 5.57 and for mares from 7.75 to 4.88. The effective population size was in 1993 Ne=114.00 and 2003 Ne=140.36. The increment of Ne during the 10-year period was 26.36 animals. The average heterozygosity estimated on the frequencies of blood types, biochemical markers and microsatellites was enough large and was connected with a low coefficient of inbreeding. Linear type evolutions of 494 horses of the Old Kladrub breed for 32 traits were used to analyse the effect of variety and stud. The data were used for the estimation of population parameters and heritability coefficients. The specific properties and variation of the Old Kladrub horse in its current state were characterized by the overall mean, standard deviation, coefficient of variation, number of utilized scores and heritabilities. The highest coefficient of variation showed the forelimbs-side view (40.14 %), chest girth (36.25 %) and height at withers (30.97 %). The 8 traits showed heritabilities within the interval of 0.20 to 0.68. These traits are candidates as selection criteria. Significant differences between both varieties were found in 13 from 32 traits. Significant differences were found in 12 of 32 traits between the Kladruby stud and the private studs.

Der Sommer und Herbst 2003 aus phänologischer Sicht | Summer and autumn 2003 from a phenological point of view

2004 ◽  
Vol 155 (5) ◽  
pp. 142-145 ◽  
Author(s):  
Claudio Defila
Keyword(s):  
Time Series ◽  
New Record ◽  
Point Of View ◽  
Late Spring ◽  
Mean Deviation ◽  
Leaf Shedding ◽  
The Mean ◽  
Very High ◽  
Selection Of

The record-breaking heatwave of 2003 also had an impact on the vegetation in Switzerland. To examine its influences seven phenological late spring and summer phases were evaluated together with six phases in the autumn from a selection of stations. 30% of the 122 chosen phenological time series in late spring and summer phases set a new record (earliest arrival). The proportion of very early arrivals is very high and the mean deviation from the norm is between 10 and 20 days. The situation was less extreme in autumn, where 20% of the 103 time series chosen set a new record. The majority of the phenological arrivals were found in the class «normal» but the class«very early» is still well represented. The mean precocity lies between five and twenty days. As far as the leaf shedding of the beech is concerned, there was even a slight delay of around six days. The evaluation serves to show that the heatwave of 2003 strongly influenced the phenological events of summer and spring.

Growth Characteristics of Activated Sludges Acclimated to para-Nitrophenol in Batch and Continuous Modes

1994 ◽  
Vol 29 (7) ◽  
pp. 327-333
Author(s):  
Y. Matsui ◽  
F. Yamaguchi ◽  
Y. Suwa ◽  
Y. Urushigawa
Keyword(s):  
Growth Characteristics ◽  
The Other ◽  
Operational Mode ◽  
Continuous Mode ◽  
Relative Resistance ◽  
Batch Mode ◽  
The Given ◽  
Operational Modes ◽  
Very High ◽  
Sensitive Group

Activated sludges were acclimated to p-nitrophenol (PNP) in two operational modes, a batch and a continuous. The operational mode of the PNP acclimation of activated sludges strongly affected the physiological characteristics of predominant microorganisms responsible for PNP degradation. Predominant PNP degraders in the sludge in batch mode (Sludge B) had lower PNP affinity and were relatively insensitive to PNP concentration. Those of the sludge in continuous mode (Sludge C), on the other hand, had very high PNP affinity and were sensitive to PNP. MPN enumeration of PNP degraders in sludge B and C using media with different PNP concentrations (0.05, 0.2,0.5 and 2.0 mM) supported the above results. Medium with 0.2 mM of PNP did not recover PNP degraders in sludge C well, while it recovered PNP degraders in sludge B as well as the medium with 0.05 mM did. When switching from one operational mode to the other, the predominant population in sludge B shifted to the sensitive group, but that of sludge C did not shift at the given loading of PNP, showing relative resistance to inhibitive concentration.

Application of the turbidity ratio method in the spherical particle size determination in the range m ∈ and α ∈

1979 ◽  
Vol 44 (7) ◽  
pp. 2064-2078 ◽  
Author(s):  
Blahoslav Sedláček ◽  
Břetislav Verner ◽  
Miroslav Bárta ◽  
Karel Zimmermann
Keyword(s):  
Refractive Index ◽  
Spherical Particle ◽  
Ratio Method ◽  
Refractive Indices ◽  
Relative Refractive Index ◽  
Particle Size Determination ◽  
The Individual ◽  
The Given ◽  
Turbidity Ratio ◽  
Selection Of

Basic scattering functions were used in a novel calculation of the turbidity ratios for particles having the relative refractive index m = 1.001, 1.005 (0.005) 1.315 and the size α = 0.05 (0.05) 6.00 (0.10) 15.00 (0.50) 70.00 (1.00) 100, where α = πL/λ, L is the diameter of the spherical particle, λ = Λ/μ1 is the wavelength of light in a medium with the refractive index μ1 and Λ is the wavelength of light in vacuo. The data are tabulated for the wavelength λ = 546.1/μw = 409.357 nm, where μw is the refractive index of water. A procedure has been suggested how to extend the applicability of Tables to various refractive indices of the medium and to various turbidity ratios τa/τb obtained with the individual pairs of wavelengths λa and λb. The selection of these pairs is bound to the sequence condition λa = λ0χa and λb = λ0χb, in which b-a = δ = 1, 2, 3; a = -2, -1, 0, 1, 2, ..., b = a + δ = -1, 0, 1, 2, ...; λ0 = λa=0 = 326.675 nm; χ = 546.1 : 435.8 = 1.2531 is the quotient of the given sequence.

scholarly journals Genetic diversity and population structure of ridge gourd (Luffa acutangula) accessions in a Thailand collection using SNP markers

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Grimar Abdiel Perez ◽  
Pumipat Tongyoo ◽  
Julapark Chunwongse ◽  
Hans de Jong ◽  
Anucha Wongpraneekul ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Germplasm Collection ◽  
Snp Markers ◽  
Fixation Index ◽  
Breeding Programs ◽  
Total Fixation ◽  
Unrooted Phylogenetic Tree ◽  
Luffa Acutangula ◽  
Selection Of

AbstractThis study explored a germplasm collection consisting of 112 Luffa acutangula (ridge gourd) accessions, mainly from Thailand. A total of 2834 SNPs were used to establish population structure and underlying genetic diversity while exploring the fruit characteristics together with genetic information which would help in the selection of parental lines for a breeding program. The study found that the average polymorphism information content value of 0.288 which indicates a moderate genetic diversity for this L. acutangula germplasm. STRUCTURE analysis (ΔK at K = 6) allowed us to group the accessions into six subpopulations that corresponded well with the unrooted phylogenetic tree and principal coordinate analyses. When plotted, the STRUCTURE bars to the area of collection, we observed an admixed genotype from surrounding accessions and a geneflow confirmed by the value of FST = 0.137. AMOVA based on STRUCTURE clustering showed a low 12.83% variation between subpopulations that correspond well with the negative inbreeding coefficient value (FIS =  − 0.092) and low total fixation index (FIT = 0.057). There were distinguishing fruit shapes and length characteristics in specific accessions for each subpopulation. The genetic diversity and different fruit shapes in the L. acutangula germplasm could benefit the ridge gourd breeding programs to meet the demands and needs of consumers, farmers, and vegetable exporters such as increasing the yield of fruit by the fruit width but not by the fruit length to solve the problem of fruit breakage during exportation.

scholarly journals The Urban Environment Impact of Climate Change Study and Proposal of the City Micro-Environment Improvement

2021 ◽  
Vol 13 (8) ◽  
pp. 4096
Author(s):  
Jozefína Pokrývková ◽  
Ľuboš Jurík ◽  
Lenka Lackóová ◽  
Klaudia Halászová ◽  
Richard Hanzlík ◽  
...  
Keyword(s):  
Management Practices ◽  
Water Infiltration ◽  
Environment Impact ◽  
Management Procedures ◽  
Aging Infrastructure ◽  
Continue Research ◽  
Rainwater Management ◽  
The Given ◽  
The City ◽  
Very High

The water management of cities and villages faces many challenges. Aging infrastructure systems operate for many years after their theoretical lifetime (operation) with a very high need for reconstruction and repair. The solution is proper rainwater management. The investigated area is part of the cadastral area of the Nitra city. This article is based on the use of geographic information systems (GIS) as tools in proposing water retention measures that are needed to improve the microenvironment of the city. We proceeded in several steps, which consisted of area analysis, survey, surface runoff calculations in urbanized areas, proposal of a suitable solution for given location. For real possibilities of rainwater management procedures, a new site on the outskirts of the city was selected. In the given locality, it was possible to use water infiltration as a solution. The locality has suitable conditions of land ownership, pedological conditions, the slope of the area and also the interest of the inhabitants in the ecological solution. The outlined study indicates the need to continue research on the reliability of rainwater management practices.

scholarly journals Genetic Similarity of Avena sativa L. Varieties as an Example of a Narrow Genetic Pool of Contemporary Cereal Species

Plants ◽  
2021 ◽  
Vol 10 (7) ◽  
pp. 1424
Author(s):  
Magdalena Cieplak ◽  
Sylwia Okoń ◽  
Krystyna Werwińska
Keyword(s):  
Genetic Diversity ◽  
Avena Sativa ◽  
Genetic Similarity ◽  
Breeding Programs ◽  
Central European ◽  
Cereal Species ◽  
Genetic Pool ◽  
Selection Of ◽  
High Genetic Similarity

The assessment of the genetic diversity of cultivated varieties is a very important element of breeding programs. This allows the determination of the level of genetic differentiation of cultivated varieties, their genetic distinctiveness, and is also of great importance in the selection of parental components for crossbreeding. The aim of the present study was to determine the level of genetic diversity of oat varieties currently grown in Central Europe based on two marker systems: ISSR and SCoT. The research conducted showed that both these types of markers were suitable for conducting analyses relating to the assessment of genetic diversity. The calculated coefficients showed that the analyzed cultivars were characterized by a high genetic similarity. However, the UPGMA and PCoA analyses clearly indicated the distinctiveness of the breeding programs conducted in Central European countries. The high genetic similarity of the analyzed forms allow us to conclude that it is necessary to expand the genetic pool of oat varieties. Numerous studies show that landraces may be the donor of genetic variation.

scholarly journals Genetic diversity and natural selection on the thrombospondin-related adhesive protein (TRAP) gene of Plasmodium falciparum on Bioko Island, Equatorial Guinea and global comparative analysis

2021 ◽  
Vol 20 (1) ◽  
Author(s):  
Li-Yun Lin ◽  
Hui-Ying Huang ◽  
Xue-Yan Liang ◽  
Dong-De Xie ◽  
Jiang-Tao Chen ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Plasmodium Falciparum ◽  
Natural Selection ◽  
Protein Structure ◽  
Transmembrane Protein ◽  
Fixation Index ◽  
Bioko Island ◽  
Adhesive Protein ◽  
Trap Gene ◽  
Selection Of

Abstract Background Thrombospondin-related adhesive protein (TRAP) is a transmembrane protein that plays a crucial role during the invasion of Plasmodium falciparum into liver cells. As a potential malaria vaccine candidate, the genetic diversity and natural selection of PfTRAP was assessed and the global PfTRAP polymorphism pattern was described. Methods 153 blood spot samples from Bioko malaria patients were collected during 2016–2018 and the target TRAP gene was amplified. Together with the sequences from database, nucleotide diversity and natural selection analysis, and the structural prediction were preformed using bioinformatical tools. Results A total of 119 Bioko PfTRAP sequences were amplified successfully. On Bioko Island, PfTRAP shows its high degree of genetic diversity and heterogeneity, with π value for 0.01046 and Hd for 0.99. The value of dN–dS (6.2231, p < 0.05) hinted at natural selection of PfTRAP on Bioko Island. Globally, the African PfTRAPs showed more diverse than the Asian ones, and significant genetic differentiation was discovered by the fixation index between African and Asian countries (Fst > 0.15, p < 0.05). 667 Asian isolates clustered in 136 haplotypes and 739 African isolates clustered in 528 haplotypes by network analysis. The mutations I116T, L221I, Y128F, G228V and P299S were predicted as probably damaging by PolyPhen online service, while mutations L49V, R285G, R285S, P299S and K421N would lead to a significant increase of free energy difference (ΔΔG > 1) indicated a destabilization of protein structure. Conclusions Evidences in the present investigation supported that PfTRAP gene from Bioko Island and other malaria endemic countries is highly polymorphic (especially at T cell epitopes), which provided the genetic information background for developing an PfTRAP-based universal effective vaccine. Moreover, some mutations have been shown to be detrimental to the protein structure or function and deserve further study and continuous monitoring.

scholarly journals Molecular and phylogenetic analysis reveals new diversity of Dunaliella salina from hypersaline environments

2021 ◽  
pp. 1-11
Author(s):  
Andrea Highfield ◽  
Angela Ward ◽  
Richard Pipe ◽  
Declan C. Schroeder
Keyword(s):  
Genetic Diversity ◽  
Phylogenetic Analysis ◽  
Dunaliella Salina ◽  
Phylogenetic Analyses ◽  
Ssu Rdna ◽  
Lsu Rdna ◽  
Hypersaline Environments ◽  
Rdna Its ◽  
Β Carotene ◽  
Selection Of

Abstract Twelve hyper-β carotene-producing strains of algae assigned to the genus Dunaliella salina have been isolated from various hypersaline environments in Israel, South Africa, Namibia and Spain. Intron-sizing of the SSU rDNA and phylogenetic analysis of these isolates were undertaken using four commonly employed markers for genotyping, LSU rDNA, ITS, rbcL and tufA and their application to the study of Dunaliella evaluated. Novel isolates have been identified and phylogenetic analyses have shown the need for clarification on the taxonomy of Dunaliella salina. We propose the division of D. salina into four sub-clades as defined by a robust phylogeny based on the concatenation of four genes. This study further demonstrates the considerable genetic diversity within D. salina and the potential of genetic analyses for aiding in the selection of prospective economically important strains.

Sign in / Sign up

Export Citation Format

Share Document