scholarly journals Evolution of Salt Tolerance in Arabidopsis Thaliana on Siliceous Soils Does Not Convey Tolerance to Saline Calcareous Soils

2021 ◽  
Author(s):  
Laura Pérez-Martín ◽  
Silvia Busoms ◽  
Maria Jose Almira ◽  
Nicole Azagury ◽  
Joana Terés ◽  
...  
Keyword(s):  
Arabidopsis Thaliana ◽  
Salinity Tolerance ◽  
Ion Homeostasis ◽  
Calcareous Soils ◽  
Stress Factors ◽  
Alkaline Soils ◽  
Common Gardens ◽  
Alkaline Conditions ◽  
Whole Genome Scan ◽  
Mineral Concentrations

Abstract Purpose Alkaline salinity constrains crop yield. Previously, we found local adaptation of Arabidopsis thaliana demes to saline-siliceous soils (pH≤7) and to non-saline carbonate soils. However, any natural population of A. thaliana was localized on saline-alkaline soils. This suggests that salinity tolerance evolved on saline-siliceous soils may not confer tolerance to alkaline salinity. This hypothesis was explored by addressing physiological and molecular responses to saline-alkaline conditions of A. thaliana demes differing in salinity and carbonate tolerance.Methods A. thaliana native to saline-siliceous soils (G3), to non-saline carbonate soils (G1), or to soils with intermediate levels of these factors (G2) were cultivated in common gardens on saline-siliceous or saline-calcareous substrate. Hydroponics and irrigation experiments confirmed the phenotypes. Growth, mineral concentrations, genome differences, and expression of candidate genes were assessed in the different groups.Results G3 performed best on saline-siliceous soil and in hydroponics with salinity (pH 5.9). However, G3 was more sensitive to saline-alkaline conditions than G1 and G2. Fitness under saline-alkaline conditions was G2 > G1>G3 and G2 best maintained ion homeostasis under alkaline salinity. Whole genome scan did not differentiate among the groups, while distinctive patterns for FRO2, NINJA, and CCB4 were found and confirmed by qPCR.Conclusion In A. thaliana, salinity tolerance evolved on saline-siliceous soils does not provide tolerance to alkaline salinity. Plants from soils with intermediate conditions (G2) have more plasticity to adapt to alkaline salinity than those locally adapted to these individual stress factors. Higher expression of NINJA and CCB4 may contribute to this better adaptation.

Balancing salinity stress responses in halophytes and non-halophytes: a comparison between Thellungiella and Arabidopsis thaliana

2013 ◽  
Vol 40 (9) ◽  
pp. 819 ◽  
Author(s):  
Dorothea Bartels ◽  
Challabathula Dinakar
Keyword(s):  
Arabidopsis Thaliana ◽  
Salt Tolerance ◽  
Salinity Tolerance ◽  
Stress Responses ◽  
Molecular Mechanisms ◽  
Light Stress ◽  
Stress Factors ◽  
Natural Environments ◽  
Terrestrial Plants ◽  
Abiotic Stress Factors

Salinity is one of the major abiotic stress factors that drastically reduces agricultural productivity. In natural environments salinity often occurs together with other stresses such as dehydration, light stress or high temperature. Plants cope with ionic stress, dehydration and osmotic stress caused by high salinity through a variety of mechanisms at different levels involving physiological, biochemical and molecular processes. Halophytic plants exist successfully in stressful saline environments, but most of the terrestrial plants including all crop plants are glycophytes with varying levels of salt tolerance. An array of physiological, structural and biochemical adaptations in halophytes make them suitable models to study the molecular mechanisms associated with salinity tolerance. Comparative analysis of plants that differ in their abilities to tolerate salinity will aid in better understanding the phenomenon of salinity tolerance. The halophyte Thellungiella salsuginea has been used as a model for studying plant salt tolerance. In this review, T. salsuginea and the glycophyte Arabidopsis thaliana are compared with regards to their biochemical, physiological and molecular responses to salinity. In addition recent developments are presented for improvement of salinity tolerance in glycophytic plants using genes from halophytes.

scholarly journals Transcriptomics Reveals Fast Changes in Salicylate and Jasmonate Signaling Pathways in Shoots of Carbonate-Tolerant Arabidopsis thaliana under Bicarbonate Exposure

2021 ◽  
Vol 22 (3) ◽  
pp. 1226
Author(s):  
Laura Pérez-Martín ◽  
Silvia Busoms ◽  
Roser Tolrà ◽  
Charlotte Poschenrieder
Keyword(s):  
Cell Cycle ◽  
Arabidopsis Thaliana ◽  
Iron Homeostasis ◽  
Calcareous Soils ◽  
Fe Deficiency ◽  
Starch Degradation ◽  
Sulfur Starvation ◽  
Aerial Parts ◽  
Key Factor ◽  
Alkaline Conditions

High bicarbonate concentrations of calcareous soils with high pH can affect crop performance due to different constraints. Among these, Fe deficiency has mostly been studied. The ability to mobilize sparingly soluble Fe is a key factor for tolerance. Here, a comparative transcriptomic analysis was performed with two naturally selected Arabidopsis thaliana demes, the carbonate-tolerant A1(c+) and the sensitive T6(c−). Analyses of plants exposed to either pH stress alone (pH 5.9 vs. pH 8.3) or to alkalinity caused by 10 mM NaHCO3 (pH 8.3) confirmed better growth and nutrient homeostasis of A1(c+) under alkaline conditions. RNA-sequencing (RNA-seq) revealed that bicarbonate quickly (3 h) induced Fe deficiency-related genes in T6(c−) leaves. Contrastingly, in A1(c+), initial changes concerned receptor-like proteins (RLP), jasmonate (JA) and salicylate (SA) pathways, methionine-derived glucosinolates (GS), sulfur starvation, starch degradation, and cell cycle. Our results suggest that leaves of carbonate-tolerant plants do not sense iron deficiency as fast as sensitive ones. This is in line with a more efficient Fe translocation to aerial parts. In A1(c+) leaves, the activation of other genes related to stress perception, signal transduction, GS, sulfur acquisition, and cell cycle precedes the induction of iron homeostasis mechanisms yielding an efficient response to bicarbonate stress.

scholarly journals Identification and Quantification of Coumarins by UHPLC-MS in Arabidopsis Thaliana Natural Populations

Molecules ◽  
2021 ◽  
Vol 26 (6) ◽  
pp. 1804
Author(s):  
Izabela Perkowska ◽  
Joanna Siwinska ◽  
Alexandre Olry ◽  
Jérémy Grosjean ◽  
Alain Hehn ◽  
...  
Keyword(s):  
Arabidopsis Thaliana ◽  
High Performance ◽  
Biological Activities ◽  
Natural Populations ◽  
Biologically Active ◽  
Stress Factors ◽  
Mass Spectrometry Analysis ◽  
Engineering Research ◽  
Spectrometry Analysis ◽  
Model Plant Arabidopsis Thaliana

Coumarins are phytochemicals occurring in the plant kingdom, which biosynthesis is induced under various stress factors. They belong to the wide class of specialized metabolites well known for their beneficial properties. Due to their high and wide biological activities, coumarins are important not only for the survival of plants in changing environmental conditions, but are of great importance in the pharmaceutical industry and are an active source for drug development. The identification of coumarins from natural sources has been reported for different plant species including a model plant Arabidopsis thaliana. In our previous work, we demonstrated a presence of naturally occurring intraspecies variation in the concentrations of scopoletin and its glycoside, scopolin, the major coumarins accumulating in Arabidopsis roots. Here, we expanded this work by examining a larger group of 28 Arabidopsis natural populations (called accessions) and by extracting and analysing coumarins from two different types of tissues–roots and leaves. In the current work, by quantifying the coumarin content in plant extracts with ultra-high-performance liquid chromatography coupled with a mass spectrometry analysis (UHPLC-MS), we detected a significant natural variation in the content of simple coumarins like scopoletin, umbelliferone and esculetin together with their glycosides: scopolin, skimmin and esculin, respectively. Increasing our knowledge of coumarin accumulation in Arabidopsis natural populations, might be beneficial for the future discovery of physiological mechanisms of action of various alleles involved in their biosynthesis. A better understanding of biosynthetic pathways of biologically active compounds is the prerequisite step in undertaking a metabolic engineering research.

scholarly journals Genetic analysis identifies quantitative trait loci controlling rosette mineral concentrations in Arabidopsis thaliana under drought

2009 ◽  
Vol 184 (1) ◽  
pp. 180-192 ◽  
Author(s):  
Artak Ghandilyan ◽  
Luis Barboza ◽  
Sébastien Tisné ◽  
Christine Granier ◽  
Matthieu Reymond ◽  
...  
Keyword(s):  
Arabidopsis Thaliana ◽  
Quantitative Trait Loci ◽  
Genetic Analysis ◽  
Quantitative Trait ◽  
Trait Loci ◽  
Mineral Concentrations

scholarly journals Productive and Physiological Response of Organic Potato Grown under Highly Calcareous Soils to Fertilization and Mycorrhization Management

Agronomy ◽  
2020 ◽  
Vol 10 (8) ◽  
pp. 1200
Author(s):  
Sara Lombardo ◽  
Cristina Abbate ◽  
Gaetano Pandino ◽  
Bruno Parisi ◽  
Aurelio Scavo ◽  
...  
Keyword(s):  
Organic Farming ◽  
Mycorrhizal Fungi ◽  
Calcareous Soils ◽  
Arbuscular Mycorrhizal ◽  
Low Fertility ◽  
Soil Conditions ◽  
Alkaline Soils ◽  
Gas Exchange Parameters ◽  
Marketable Yield ◽  
Potato Growth

The enhancement of the actual low yields is the most important challenge regarding organic farming management. In this view, a valid tool may arise by the improvement of fertilization management and efficiency. In this regard, arbuscular mycorrhizal fungi (AMF) can play an important role, especially in low fertility soils such as calcareous ones, through a better nutrient uptake and by alleviating abiotic stresses. A replicated-space experiment was carried out to investigate the role of mycorrhizal-based inoculants combined with full or halved fertilizer doses on yield and physiological traits of three early potato cultivars organically grown in highly calcareous and alkaline soils. The results indicate that AMF symbiosis ameliorated, in comparison to the not-inoculated plants, the potato tolerance to limestone stress by enhancing the potential quantum efficiency of photosystem II (Fv/F0) and plant gas-exchange parameters (photosynthesis rate and stomatal conductance). Moreover, a significant improvement of marketable yield (+25%) was observed, mainly due to an increase of the number of tubers plant−1 (+21%) and, to a lesser extent, of average tuber weight (+10%). The AMF efficiency was higher applying halved fertilizer doses and in the location where soil conditions were unfavourable for potato growth. Moreover, the qRT-PCR highlighted that AMF colonization was similar in each location, demonstrating their tolerance to limestone, alkalinity and P stresses. These findings outlined that AMF are good candidate to bio-ameliorate calcareous soils and are very useful for improving potato yields under organic farming, limiting external fertilizers supply and environmental pollution.

scholarly journals Breeding for abiotic stresses for sustainable agriculture

2007 ◽  
Vol 363 (1492) ◽  
pp. 703-716 ◽  
Author(s):  
J.R Witcombe ◽  
P.A Hollington ◽  
C.J Howarth ◽  
S Reader ◽  
K.A Steele
Keyword(s):  
Salinity Tolerance ◽  
Abiotic Stresses ◽  
Genetic Resistance ◽  
Aluminium Toxicity ◽  
Stress Factors ◽  
Aluminium Tolerance ◽  
Abiotic Stress Factors ◽  
Genomic Technologies ◽  
Component Traits ◽  
Good Potential

Using cereal crops as examples, we review the breeding for tolerance to the abiotic stresses of low nitrogen, drought, salinity and aluminium toxicity. All are already important abiotic stress factors that cause large and widespread yield reductions. Drought will increase in importance with climate change, the area of irrigated land that is salinized continues to increase, and the cost of inorganic N is set to rise. There is good potential for directly breeding for adaptation to low N while retaining an ability to respond to high N conditions. Breeding for drought and salinity tolerance have proven to be difficult, and the complex mechanisms of tolerance are reviewed. Marker-assisted selection for component traits of drought in rice and pearl millet and salinity tolerance in wheat has produced some positive results and the pyramiding of stable quantitative trait locuses controlling component traits may provide a solution. New genomic technologies promise to make progress for breeding tolerance to these two stresses through a more fundamental understanding of underlying processes and identification of the genes responsible. In wheat, there is a great potential of breeding genetic resistance for salinity and aluminium tolerance through the contributions of wild relatives.

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