Environmental variation vs co-occurrence of two fish families (Gerreidae and Ariidae) in Terminos Lagoon, Campeche, Mexico

2021 ◽  
Vol 3 (1) ◽  
pp. 5-22
Author(s):  
Domingo Flores-Hernández ◽  
Julia Ramos-Miranda ◽  
Luis Amado Ayala-Pérez ◽  
Francisco Gómez Criollo
Keyword(s):  
Fish Species ◽  
Fish Community ◽  
Anthropogenic Activities ◽  
Salinity Gradient ◽  
Null Model ◽  
Terminos Lagoon ◽  
Southern Gulf Of Mexico ◽  
Taxonomic Groups ◽  
And Function ◽  
Abundance And Distribution

Terminos Lagoon is recognized as an ecosystem of great diversity and productivity in the southern Gulf of Mexico. It is also the site of various anthropogenic activities in the lagoon as well as in its surroundings. In addition, in recent years this lagoon has showed variations in temperature and salinity as a result of global warming and/or watershed management. This has generated variations in the structure and function of fish communities, among other taxonomic groups. IIn this work, we analyze the changes in abundance and distribution associated with modifications in the salinity of fish species from two key families (Ariidae y Gerreidae) during the years 1980, 1998, and 2011. Salinity is analyzed in the three periods (ANOVA, Tukey (HSD); the abundance of species, environmental breadth according to salinity (Levins Index), environmental overlap (Pianka Index), and co-occurrence (C-score) are also analyzed. Statistical differences were tested using the null model. The results showed high variability in salinity, with a tendency to increase during the studied period with 24.7, 27.9, and 28.4 UPS for each year, respectively (p < 0.0001). The abundance of both families increased from 1980 to 1998 and decreased in 2011 (82% for Ariidae and 62% for Gerreidae). The C-score ranged from 1.07 in 1980 to 0.78 in 1998 and 2.71 in 2011. The observed averages were significantly lower than the simulated average (P <0.0001). In conclusion, the increase in salinity is probably one of the causes of a variation in the abundance of fish species. According to a possible more limited competition for space, fish abundance and C-score fluctuated inversely, indicating a trend towards a more generalist fish community. Keywords: Environmental breadth, environmental overlapping, co-ocurrence, and salinity gradient.

scholarly journals Fish species richness in the Terminos Lagoon: An occurrence data compilation of four sampling campaigns along a multidecadal series

2021 ◽  
Vol 9 ◽  
Author(s):  
Carlos Paz-Ríos ◽  
Atahualpa Sosa-López ◽  
Yassir Torres-Rojas ◽  
Julia Ramos-Miranda ◽  
Rodolfo del Río-Rodríguez
Keyword(s):  
Gulf Of Mexico ◽  
Fish Species ◽  
Fish Community ◽  
Keystone Species ◽  
Fish Distribution ◽  
Tropical Fish ◽  
Terminos Lagoon ◽  
Occurrence Data ◽  
Southern Gulf Of Mexico ◽  
Protection Area

Here we present an occurrence dataset that contributes to the knowledge of tropical fish distribution in coastal habitats from the Terminos Lagoon Flora and Fauna Protection Area, one of the largest lagoon ecosystems in the Gulf of Mexico. Fish are high biomass keystone species in the Terminos Lagoon which provide socio-economic and ecosystem services. An initiative in 1980 was carried out to systematically sample the fish community of Terminos Lagoon for an annual cycle; the effectiveness of its results led to replicate in the lagoon the same sampling design for three more campaigns in 1998, 2010 and 2016. Constituted as a Flora and Fauna Protection Area in 1994, the Terminos Lagoon has received many efforts to inventory its biodiversity, particularly on the fish community since the 70s; however, these studies did not have consistent survey protocols, nor the longevity of the present study, which was over four decades. A total of 141 fish species, belonging to 90 genera, 49 families, 20 orders and two classes are presented in this study. Information on fish species occurrence data is provided corresponding to the Terminos Lagoon coastal ecosystem, southern Gulf of Mexico, assembled from four time periods at 1980, 1998, 2010 and 2016. The records form part of a consistently homogeneous database compilation, mostly derived from the research programme's sampled material on tropical fishery resources of the “Instituto de Ecologia, Pesquerias y Oceanografia del Golfo de Mexico (EPOMEX)”. The current dataset represents the first and most comprehensive online open-access source of information concerning the fish community occurring along and wide of the Terminos Lagoon ecosystem, with 1,249 data records and a total count of 48,717 organisms. Data are available through the Ocean Biodiversity Information System (OBIS).

scholarly journals Cadmium, Lead, Copper, Zinc, and Iron Concentration Patterns in Three Marine Fish Species from Two Different Mining Sites inside the Gulf of California, Mexico

2021 ◽  
Vol 18 (2) ◽  
pp. 844
Author(s):  
Elisa Serviere-Zaragoza ◽  
Salvador E. Lluch-Cota ◽  
Alejandra Mazariegos-Villarreal ◽  
Eduardo F. Balart ◽  
Hugo Valencia-Valdez ◽  
...  
Keyword(s):  
Fish Species ◽  
Gulf Of California ◽  
Anthropogenic Activities ◽  
Iron Concentration ◽  
Dry Weight ◽  
Human Consumption ◽  
Metal Concentrations ◽  
Mining Sites ◽  
Copper Zinc ◽  
Cadmium Lead

In the Gulf of California; mineral deposits have contributed to high metal contents in coastal environments. This study examined cadmium; lead; copper; zinc; and iron contents in three fish species; Kyphosus vaigiensis (herbivore), Stegastes rectifraenum (omnivore), and Balistes polylepis (carnivore) at two mining sites. Metal concentrations were analyzed by atomic absorption spectrophotometry and stable nitrogen and carbon isotopes were estimated using mass spectrophotometry. Also, we assessed the risk to human health from the consumption of these three species based on permissible limits; although only two of them (Kyphosus and Balistes) are consumed as food. Metal concentrations differed among fish species; except for iron. The highest concentrations of metals were not always recorded in the species at the highest trophic level; i.e., Balistes. The highest concentrations (dry weight) recorded were cadmium (0.21 ± 0.03 µg g−1) and lead (1.67 ± 0.26 µg g−1), in S. rectifraenum; copper (1.60 ± 0.49 µg g−1) and zinc (67.30 ± 8.79 µg g−1), in B. polylepis; and iron (27.06 ± 2.58 µg g−1), in K. vaigiensis. Our findings show that each element accumulates differently in particular marine organisms; depending on the physiology of the species and the biogeochemistry of its habitat; which in turn is affected by the anthropogenic activities in adjacent areas. No risk of heavy metals toxicity is expected from the human consumption of the species and sites studied

scholarly journals Function of Circular RNAs in Fish and Their Potential Application as Biomarkers

2021 ◽  
Vol 22 (13) ◽  
pp. 7119
Author(s):  
Golam Rbbani ◽  
Artem Nedoluzhko ◽  
Jorge Galindo-Villegas ◽  
Jorge M. O. Fernandes
Keyword(s):  
Growth Regulation ◽  
Functional Characterization ◽  
Circular Rnas ◽  
Farmed Fish ◽  
Developmentally Regulated ◽  
Specific Expression ◽  
Cell Type Specific Expression ◽  
Cell Type Specific ◽  
Taxonomic Groups ◽  
And Function

Circular RNAs (circRNAs) are an emerging class of regulatory RNAs with a covalently closed-loop structure formed during pre-mRNA splicing. Recent advances in high-throughput RNA sequencing and circRNA-specific computational tools have driven the development of novel approaches to their identification and functional characterization. CircRNAs are stable, developmentally regulated, and show tissue- and cell-type-specific expression across different taxonomic groups. They play a crucial role in regulating various biological processes at post-transcriptional and translational levels. However, the involvement of circRNAs in fish immunity has only recently been recognized. There is also broad evidence in mammals that the timely expression of circRNAs in muscle plays an essential role in growth regulation but our understanding of their expression and function in teleosts is still very limited. Here, we discuss the available knowledge about circRNAs and their role in growth and immunity in vertebrates from a comparative perspective, with emphasis on cultured teleost fish. We expect that the interest in teleost circRNAs will increase substantially soon, and we propose that they may be used as biomarkers for selective breeding of farmed fish, thus contributing to the sustainability of the aquaculture sector.

scholarly journals Thermal performance of fish is explained by an interplay between physiology, behaviour and ecology

2019 ◽  
Vol 7 (1) ◽  
Author(s):  
Philipp Neubauer ◽  
Ken H Andersen
Keyword(s):  
Thermal Performance ◽  
Null Model ◽  
Oxygen Limitation ◽  
Driving Mechanism ◽  
Metabolic Rates ◽  
Metabolic Scope ◽  
And Function ◽  
Temperature Impacts ◽  
Term Performance ◽  
Species Ecology

Abstract Increasing temperatures under climate change are thought to affect individual physiology of fish and other ectotherms through increases in metabolic demands, leading to changes in species performance with concomitant effects on species ecology. Although intuitively appealing, the driving mechanism behind thermal performance is contested; thermal performance (e.g. growth) appears correlated with metabolic scope (i.e. oxygen availability for activity) for a number of species, but a substantial number of datasets do not support oxygen limitation of long-term performance. Whether or not oxygen limitations via the metabolic scope, or a lack thereof, have major ecological consequences remains a highly contested question. size and trait-based model of energy and oxygen budgets to determine the relative influence of metabolic rates, oxygen limitation and environmental conditions on ectotherm performance. We show that oxygen limitation is not necessary to explain performance variation with temperature. Oxygen can drastically limit performance and fitness, especially at temperature extremes, but changes in thermal performance are primarily driven by the interplay between changing metabolic rates and species ecology. Furthermore, our model reveals that fitness trends with temperature can oppose trends in growth, suggesting a potential explanation for the paradox that species often occur at lower temperatures than their growth optimum. Our model provides a mechanistic underpinning that can provide general and realistic predictions about temperature impacts on the performance of fish and other ectotherms and function as a null model for contrasting temperature impacts on species with different metabolic and ecological traits.

scholarly journals Cysteine-Free Proteins in the Immunobiology of Arthropod-Borne Diseases

2010 ◽  
Vol 2010 ◽  
pp. 1-10 ◽  
Author(s):  
J. Santiago Mejia ◽  
Erik N. Arthun ◽  
Richard G. Titus
Keyword(s):  
Plasmodium Falciparum ◽  
Amino Acid ◽  
Distribution Patterns ◽  
Structural Features ◽  
Structure And Function ◽  
Cysteine Residues ◽  
Distribution Analysis ◽  
And Function ◽  
Abundance And Distribution ◽  
Host Parasite

One approach to identify epitopes that could be used in the design of vaccines to control several arthropod-borne diseases simultaneously is to look for common structural features in the secretome of the pathogens that cause them. Using a novel bioinformatics technique, cysteine-abundance and distribution analysis, we found that many different proteins secreted by several arthropod-borne pathogens, includingPlasmodium falciparum, Borrelia burgdorferi, and eight species of Proteobacteria, are devoid of cysteine residues. The identification of three cysteine-abundance and distribution patterns in several families of proteins secreted by pathogenic and nonpathogenic Proteobacteria, and not found when the amino acid analyzed was tryptophan, provides evidence of forces restricting the content of cysteine residues in microbial proteins during evolution. We discuss these findings in the context of protein structure and function, antigenicity and immunogenicity, and host-parasite relationships.

scholarly journals Further twists in gastropod shell evolution

2008 ◽  
Vol 4 (2) ◽  
pp. 179-182 ◽  
Author(s):  
Reuben Clements ◽  
Thor-Seng Liew ◽  
Jaap Jan Vermeulen ◽  
Menno Schilthuizen
Keyword(s):  
Evolutionary Biology ◽  
Logarithmic Spiral ◽  
Spiral Growth ◽  
Evolutionary Perspective ◽  
Gastropod Shell ◽  
Form And Function ◽  
Evolutionary Origins ◽  
Taxonomic Groups ◽  
And Function ◽  
Shell Coiling

The manner in which a gastropod shell coils has long intrigued laypersons and scientists alike. In evolutionary biology, gastropod shells are among the best-studied palaeontological and neontological objects. A gastropod shell generally exhibits logarithmic spiral growth, right-handedness and coils tightly around a single axis. Atypical shell-coiling patterns (e.g. sinistroid growth, uncoiled whorls and multiple coiling axes), however, continue to be uncovered in nature. Here, we report another coiling strategy that is not only puzzling from an evolutionary perspective, but also hitherto unknown among shelled gastropods. The terrestrial gastropod Opisthostoma vermiculum sp. nov. generates a shell with: (i) four discernable coiling axes, (ii) body whorls that thrice detach and twice reattach to preceding whorls without any reference support, and (iii) detached whorls that coil around three secondary axes in addition to their primary teleoconch axis. As the coiling strategies of individuals were found to be generally consistent throughout, this species appears to possess an unorthodox but rigorously defined set of developmental instructions. Although the evolutionary origins of O. vermiculum and its shell's functional significance can be elucidated only once fossil intermediates and live individuals are found, its bewildering morphology suggests that we still lack an understanding of relationships between form and function in certain taxonomic groups.

scholarly journals Redundancy in metrics describing the composition, structure, and functioning of the North Sea demersal fish community

2012 ◽  
Vol 69 (1) ◽  
pp. 8-22 ◽  
Author(s):  
Simon P. R. Greenstreet ◽  
Helen M. Fraser ◽  
Stuart I. Rogers ◽  
Verena M. Trenkel ◽  
Stephen D. Simpson ◽  
...  
Keyword(s):  
North Sea ◽  
Fish Community ◽  
Size Structure ◽  
Demersal Fish ◽  
Community Size ◽  
The North ◽  
Management Objectives ◽  
The North Sea ◽  
Composition Structure ◽  
And Function

Abstract Greenstreet, S. P. R., Fraser, H. M., Rogers, S. I., Trenkel, V. M., Simpson, S. D., and Pinnegar, J. K. 2012. Redundancy in metrics describing the composition, structure, and functioning of the North Sea demersal fish community. – ICES Journal of Marine Science, 69: 8–22. Broader ecosystem management objectives for North Sea demersal fish currently focus on restoring community size structure. However, most policy drivers explicitly concentrate on restoring and conserving biodiversity, and it has not yet been established that simply restoring demersal fish size composition will be sufficient to reverse declines in biodiversity and ensure a generally healthy community. If different aspects of community composition, structure, and function vary independently, then to monitor all aspects of community general health will require application of a suite of metrics. This assumes low redundancy among the metrics used in any such suite and implies that addressing biodiversity issues specifically will require explicit management objectives for particular biodiversity metrics. This issue of metric redundancy is addressed, and 15 metrics covering five main attributes of community composition, structure, and function are applied to groundfish survey data. Factor analysis suggested a new interpretation of the metric information and indicated that a minimum suite of seven metrics was necessary to ensure that all changes in the general health of the North Sea demersal fish community were monitored properly. Covariance among size-based and species-diversity metrics was low, implying that restoration of community size structure would not necessarily reverse declines in species diversity.

scholarly journals The hydraulic management of the Barra Bonita reservoir (SP, Brazil) as a factor influencing the temporal succession of its fish community

2007 ◽  
Vol 67 (3) ◽  
pp. 433-445 ◽  
Author(s):  
ML. Petesse ◽  
M. Petrere Jr. ◽  
RJ. Spigolon
Keyword(s):  
Fish Species ◽  
Fish Community ◽  
Abundant Species ◽  
Anthropogenic Stress ◽  
Reservoir Level ◽  
Species List ◽  
Adaptation Capacity ◽  
Reproductive Structures ◽  
Temporal Succession ◽  
Reproductive Compensation

The temporal succession of fish communities allows evaluating the environmental conditions and the adaptation capacity of the fish species to anthropogenic stress in reservoirs. The fish community at Barra Bonita reservoir was sampled in two different periods of the year (dry and rainy) and in three different areas of the reservoir (fluvial, transition, and lentic). The species list was compared to another four lists, trying to detect the transformations of the fish community for the last 15 years. In order to evaluate the adaptation of the present fish community to the hydraulic management of reservoir, the trophic and reproductive structures were studied. Temporal succession analysis shows little change in fish richness of the communities. The number of fish species varies between 23 and 39 for a total of 68 registered species. From this, 27 can be considered constant, 14 accessory and 27 accidental; the main differences observed were for Anostomidae, Loricariidae and Characidae families. In relation to the hydraulic management, we found a fish community stabilized and adapted to environmental stress. This is characterized by the dominance of small-sized fish species of opportunistic diet and high reproductive compensation (r-strategists). The overlap of biological cycles of the most abundant species with the reservoir level fluctuations points to the period from September to March-April as critical for reproductive success and only the species with partial reproductive strategy or parental care are best succeeded. These results, interpreted in the context of the reservoir aging process, indicate that Barra Bonita reservoir is entering a transition phase, between the colonization and aging stages.

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