scholarly journals Estimation of above-ground phytomass and carbon in tree resources outside the forest (TROF): A geo-spatial approach

2015 ◽  
Vol 24 (1) ◽  
pp. 34-40 ◽  
Author(s):  
B. P. Heyojoo ◽  
S. Nandy
Keyword(s):  
Satellite Image ◽  
Uttar Pradesh ◽  
Individual Species ◽  
Individual Tree ◽  
Spatial Approach ◽  
Specific Standard ◽  
Vegetation Carbon ◽  
Carbon Project ◽  
The Individual ◽  
Species Specific

This study aims to estimate above-ground phytomass and carbon of TROF ecosystem in part of Bijnor district in Uttar Pradesh state of India using IRS P6 LISS-IV satellite image by geo-spatial approach coupled with field sampling. Chacko’s formula was referred to compute number of samples in each TROF types and the sample plot size in each stratum was adopted from Vegetation Carbon Project (VCP) under National Carbon Project (NCP). With the help of field data consisting mainly the height and girth information, volume of each individual tree per plot was obtained using site and tree species-specific standard volumetric equations. The phytomass was calculated by multiplying volume with Biomass Expansion Factor (BEF) then with regional specific gravity of the individual species and summed up in each plot to get total phytomass per plot. The total phytomass per plot was reported to be maximum 544.00 t/ha for linear TROF followed by 121.89 t/ha for block TROF. The carbon from phytomass was obtained by multiplying the total phytomass by a conversion factor that represents the average carbon content in phytomass. Spectral modeling for phytomass with different bands and indices were established and the best fit curve (R2 = 0.552) with red band was applied to generate phytomass and carbon distribution map of the study area.Banko Janakari, Vol. 24, No. 1, pp. 34-40

scholarly journals Country and regional carbon stock in forest cover – estimates based on the first cycle of the Czech National Forest Inventory data (2001–2004)

2017 ◽  
Vol 63 (2-3) ◽  
pp. 113-125 ◽  
Author(s):  
Ján Merganič ◽  
Katarína Merganičová ◽  
Bohdan Konôpka ◽  
Miloš Kučera
Keyword(s):  
Forest Inventory ◽  
Carbon Stock ◽  
Forest Cover ◽  
Regional Distribution ◽  
National Forest Inventory ◽  
National Forest ◽  
Individual Tree ◽  
The Individual ◽  
Species Specific ◽  
Total Tree

AbstractSince forests can play an efficient role in the mitigation of greenhouse gas emissions, objective information about the actual carbon stock is very important. Therefore, the presented paper analysed the carbon stock in the living merchantable trees (with diameter at breast height above 7 cm) of the Czech forests with regard to groups of tree species and tree compartments (wood under bark with diameter above 7 cm, wood under bark with diameter below 7 cm, bark, green twigs, foliage, stump and roots). We examined its regional distribution and relationship to the number of inhabitants and the gross domestic product. The data used for the analysis originated from 13,929 forest plots of the first Czech National Forest Inventory performed between 2001 and 2004. The total tree carbon stock was obtained as a sum of the carbon stock in the individual tree compartments estimated from the biomass amount in the compartments multiplied by the relative carbon content. Wood biomass amount was calculated by multiplying a particular part of tree volume with species-specific green wood density. The total amount of carbon stored in forest trees in the Czech Republic was over 327 mill. t, which is about 113 t of carbon per ha of forests. The highest carbon amount (160 mill. t, i.e. 49.0% of the total amount) was fixed in spruce. The minimum carbon amount fixed in the forest cover (14.35 mill. t) was calculated for Ústecký kraj (region), while the maximum carbon amount (51.51 mill. t) was found in Jihočeský kraj.

scholarly journals The Effect of Tree Crown Allometry on Community Dynamics in Mixed-Species Stands versus Monocultures. A Review and Perspectives for Modeling and Silvicultural Regulation

Forests ◽  
2019 ◽  
Vol 10 (9) ◽  
pp. 810 ◽  
Author(s):  
Hans Pretzsch
Keyword(s):  
Community Dynamics ◽  
Stand Density ◽  
Tree Level ◽  
Mixed Species ◽  
Individual Tree ◽  
Tree Allometry ◽  
Management Concepts ◽  
Realistic Representation ◽  
The Individual ◽  
Species Specific

Many recent studies have shown that the structure, density, and productivity of mixed-species stands can differ from the weighted mean of monospecific stands of the respective species. The tree and stand properties emerging by inter-specific neighborhood should be considered in models for understanding and practical management. A promising approach for this is a more realistic representation of the individual tree allometry in models and management concepts, as tree allometry determines many structural and functional aspects at the tree and stand level. Therefore, this paper is focused on the crown allometry in mixed and mono-specific stands. Firstly, we review species-specific differences in the crown allometry in monospecific stands. Secondly, we show how species-specific differences and complementarities in crown allometry can emerge in mixed-species stands. Thirdly, the consequences of allometric complementarity for the canopy packing density will be analyzed. Fourthly, we trace the crown allometry from the tree level to the stand density and show the relevance for the self-thinning in mixed versus monospecific stands. Fifth, the consequence of the findings for modeling and regulating tree and stand growth will be discussed. The review deals mainly with widespread even-aged, mono-layered stands, but the main results apply for more heterogeneous stands analogously.

scholarly journals The efficacy of antimicrobial agents is decreased in a polymicrobial environment

2021 ◽  
Author(s):  
Thomas James O'Brien ◽  
Wendy Figueroa ◽  
Martin Welch
Keyword(s):  
Antimicrobial Agents ◽  
Individual Species ◽  
Nucleotide Polymorphisms ◽  
Loss Of Function ◽  
Airway Infections ◽  
Genes Encoding ◽  
Pilus Biogenesis ◽  
The Individual ◽  
Species Specific

The airways of people with cystic fibrosis (CF) often harbour diverse polymicrobial communities. These airway infections can be impossible to resolve though antibiotic intervention, even though isolates of the individual species present are susceptible to the treatment when tested in vitro. This suggests that susceptibility to antimicrobial agents may be altered in the presence of other microbial species. In this work, we investigate how polymicrobial cultures of key CF-associated species respond to challenge with species-specific antimicrobial agents; colistin (targets Pseudomonas aeruginosa), fusidic acid (targets Staphylococcus aureus) and fluconazole (targets Candida albicans). We found that, compared with growth in axenic cultures, the target organism was protected (sometimes by several orders of magnitude) from the effect(s) of the antimicrobial agent when grown in a polymicrobial culture. This decreased antimicrobial efficacy in polymicrobial cultures was found to have both phenotypic and inherited components. Whole genome sequencing of the colistin-resistant P. aeruginosa isolates revealed single nucleotide polymorphisms and indels in genes encoding lipopolysaccharide (LPS) biosynthesis or pilus biogenesis. Colistin resistance associated with loss-of-function mutations in the LPS biosynthetic gene, wzy, could be complemented by expression of the wild-type wzy gene in trans. Our findings indicate that the polymicrobial nature of the CF airways is likely to have a significant impact on the clinical response to antimicrobial therapy.

Données LiDAR aériennes: pertinence de l'interprétation visuelle pour la foresterie

2017 ◽  
Vol 168 (3) ◽  
pp. 127-133
Author(s):  
Matthew Parkan
Keyword(s):  
Cross Sections ◽  
Forest Edge ◽  
Airborne Lidar ◽  
Visual Interpretation ◽  
Individual Tree ◽  
Small Areas ◽  
Interactive 3D ◽  
The Individual ◽  
Airborne Lidar Data ◽  
Stem Position

Airborne LiDAR data: relevance of visual interpretation for forestry Airborne LiDAR surveys are particularly well adapted to map, study and manage large forest extents. Products derived from this technology are increasingly used by managers to establish a general diagnosis of the condition of forests. Less common is the use of these products to conduct detailed analyses on small areas; for example creating detailed reference maps like inventories or timber marking to support field operations. In this context, the use of direct visual interpretation is interesting, because it is much easier to implement than automatic algorithms and allows a quick and reliable identification of zonal (e.g. forest edge, deciduous/persistent ratio), structural (stratification) and point (e.g. tree/stem position and height) features. This article examines three important points which determine the relevance of visual interpretation: acquisition parameters, interactive representation and identification of forest characteristics. It is shown that the use of thematic color maps within interactive 3D point cloud and/or cross-sections makes it possible to establish (for all strata) detailed and accurate maps of a parcel at the individual tree scale.

scholarly journals Gene Sequencing and Phylogenetic Analysis: Powerful Tools for an Improved Diagnosis of Fish Mycobacteriosis Caused by Mycobacterium fortuitum Group Members

2021 ◽  
Vol 9 (4) ◽  
pp. 797
Author(s):  
Davide Mugetti ◽  
Mattia Tomasoni ◽  
Paolo Pastorino ◽  
Giuseppe Esposito ◽  
Vasco Menconi ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Gene Sequencing ◽  
Diagnostic Techniques ◽  
Individual Species ◽  
Identification System ◽  
Mycobacterium Fortuitum ◽  
Biochemical Tests ◽  
Species Determination ◽  
Gene Encoding ◽  
The Individual

The Mycobacterium fortuitum group (MFG) consists of about 15 species of fast-growing nontuberculous mycobacteria (NTM). These globally distributed microorganisms can cause diseases in humans and animals, especially fish. The increase in the number of species belonging to MFG and the diagnostic techniques panel do not allow to clarify their real clinical significance. In this study, biomolecular techniques were adopted for species determination of 130 isolates derived from fish initially identified through biochemical tests as NTM belonging to MFG. Specifically, gene sequencing and phylogenetic analysis were used based on a fragment of the gene encoding the 65 KDa heat shock protein (hsp65). The analyzes made it possible to confirm that all the isolates belong to MFG, allowing to identify the strains at species level. Phylogenetic analysis substantially confirmed what was obtained by gene sequencing, except for six strains; this is probably due to the sequences present in NCBI database. Although the methodology used cannot represent a univocal identification system, this study has allowed us to evaluate its effectiveness as regards the species of MFG. Future studies will be necessary to apply these methods with other gene fragments and to clarify the real pathogenic significance of the individual species of this group of microorganisms.

scholarly journals Signatures of conserved and unique molecular features in Afrotheria

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Arangasamy Yazhini ◽  
Narayanaswamy Srinivasan ◽  
Sankaran Sandhya
Keyword(s):  
Ribosomal Proteins ◽  
Individual Species ◽  
Functional Domain ◽  
Nucleic Acid Binding ◽  
Uncharacterized Protein ◽  
Homologous Proteins ◽  
Functional Roles ◽  
Molecular Features ◽  
Specific Proteins ◽  
Species Specific

AbstractAfrotheria is a clade of African-origin species with striking dissimilarities in appearance and habitat. In this study, we compared whole proteome sequences of six Afrotherian species to obtain a broad viewpoint of their underlying molecular make-up, to recognize potentially unique proteomic signatures. We find that 62% of the proteomes studied here, predominantly involved in metabolism, are orthologous, while the number of homologous proteins between individual species is as high as 99.5%. Further, we find that among Afrotheria, L. africana has several orphan proteins with 112 proteins showing < 30% sequence identity with their homologues. Rigorous sequence searches and complementary approaches were employed to annotate 156 uncharacterized protein sequences and 28 species-specific proteins. For 122 proteins we predicted potential functional roles, 43 of which we associated with protein- and nucleic-acid binding roles. Further, we analysed domain content and variations in their combinations within Afrotheria and identified 141 unique functional domain architectures, highlighting proteins with potential for specialized functions. Finally, we discuss the potential relevance of highly represented protein families such as MAGE-B2, olfactory receptor and ribosomal proteins in L. africana and E. edwardii, respectively. Taken together, our study reports the first comparative study of the Afrotherian proteomes and highlights salient molecular features.

scholarly journals Crown Structure Explains the Discrepancy in Leaf Phenology Metrics Derived from Ground- and UAV-Based Observations in a Japanese Cool Temperate Deciduous Forest

Forests ◽  
2021 ◽  
Vol 12 (4) ◽  
pp. 425
Author(s):  
Noviana Budianti ◽  
Hiromi Mizunaga ◽  
Atsuhiro Iio
Keyword(s):  
Deciduous Forest ◽  
Leaf Expansion ◽  
Image Resolution ◽  
Leaf Phenology ◽  
Visual Interpretation ◽  
Temperate Deciduous Forest ◽  
Individual Tree ◽  
Crown Structure ◽  
Uav Images ◽  
The Individual

Unmanned aerial vehicles (UAV) provide a new platform for monitoring crown-level leaf phenology due to the ability to cover a vast area while offering branch-level image resolution. However, below-crown vegetation, e.g., understory vegetation, subcanopy trees, and the branches of neighboring trees, along with the multi-layered structure of the target crown may significantly reduce the accuracy of UAV-based estimates of crown leaf phenology. To test this hypothesis, we compared UAV-derived crown leaf phenology results against those based on ground observations at the individual tree scale for 19 deciduous broad-leaved species (55 individuals in total) characterized by different crown structures. The mean crown-level green chromatic coordinate derived from UAV images poorly explained inter- and intra-species variations in spring leaf phenology, most probably due to the consistently early leaf emergence in the below-crown vegetation. The start dates for leaf expansion and end dates for leaf falling could be estimated with an accuracy of <1-week when the influence of below-crown vegetation was removed from the UAV images through visual interpretation. However, a large discrepancy between the phenological metrics derived from UAV images and ground observations was still found for the end date of leaf expansion (EOE) and start date of leaf falling (SOF). Bayesian modeling revealed that the discrepancy for EOE increased as crown length and volume increased. The crown structure was not found to contribute to the discrepancy in SOF value. Our study provides evidence that crown structure is a pivotal factor to consider when using UAV photography to reliably estimate crown leaf phenology at the individual tree-scale.

Incorporating predictions into an annual forest inventory

1996 ◽  
Vol 26 (9) ◽  
pp. 1709-1713 ◽  
Author(s):  
Paul C. Van Deusen
Keyword(s):  
Forest Inventory ◽  
Variance Components ◽  
Growth Modeling ◽  
Estimation Procedure ◽  
Regression Estimator ◽  
Forest Types ◽  
Model Estimate ◽  
Individual Tree ◽  
Time Period ◽  
The Individual

Growth modeling of forests at the individual tree and stand levels is a highly refined procedure for many forest types. A method to incorporate predictions from such models into a forest inventory system is developed. Variance components from the actual measurements and from the predicted measurements are used to estimate the variance of the combined predicted value. The only assumption required to justify this method is that the model estimate has a bias that does not change from one time period to the next. The estimation procedure proposed here can also incorporate remotely sensed information via a regression estimator.

scholarly journals Estimation of Genetic and Phenotypic Parameters for Growth Traits in a Clonal Seed Orchard of Pinus kesiya in Malawi

ISRN Forestry ◽  
2013 ◽  
Vol 2013 ◽  
pp. 1-6 ◽  
Author(s):  
Edward Missanjo ◽  
Gift Kamanga-Thole ◽  
Vidah Manda
Keyword(s):  
Growth Traits ◽  
Seed Orchard ◽  
Direct Selection ◽  
Tree Model ◽  
Individual Tree ◽  
Individual Level ◽  
Clonal Seed Orchard ◽  
Pinus Kesiya ◽  
Individual Tree Model ◽  
The Individual

Genetic and phenotypic parameters for height, diameter at breast height (dbh), and volume were estimated for Pinus kesiya Royle ex Gordon clonal seed orchard in Malawi using an ASReml program, fitting an individual tree model. The data were from 88 clones assessed at 18, 23, 30, 35, and 40 years of age. Heritability estimates for height, dbh, and volume were moderate to high ranging from 0.19 to 0.54, from 0.14 to 0.53, and from 0.20 to 0.59, respectively, suggesting a strong genetic control of the traits at the individual level, among families, and within families. The genetic and phenotypic correlations between the growth traits were significantly high and ranged from 0.69 to 0.97 and from 0.60 to 0.95, respectively. This suggests the possibility of indirect selection in trait with direct selection in another trait. The predicted genetic gains showed that the optimal rotational age of the Pinus kesiya clonal seed orchard is 30 years; therefore, it is recommended to establish a new Pinus kesiya clonal seed orchard. However, selective harvest of clones with high breeding values in the old seed orchard should be considered so that the best parents in the old orchard can continue to contribute until the new orchard is well established.

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