scholarly journals Measuring the Inter and Intraspecific Sexual Shape Dimorphism and Body Shape Variation in Generalist Ground Beetles in Russia

Insects ◽  
2020 ◽  
Vol 11 (6) ◽  
pp. 361
Author(s):  
Hugo A. Benítez ◽  
Raisa A. Sukhodolskaya ◽  
Rodrigo Órdenes-Clavería ◽  
Tamara A. Avtaeva ◽  
Shapaat A. Kushalieva ◽  
...  
Keyword(s):  
Sexual Dimorphism ◽  
Extreme Environments ◽  
Pairwise Comparison ◽  
Principal Component ◽  
Ground Beetles ◽  
Shape Variation ◽  
Mahalanobis Distances ◽  
Generalist Species ◽  
Pterostichus Melanarius ◽  
Sexual Shape Dimorphism

Ground beetles in multiple species vary greatly in the expression of the shape on sexual traits, resulting in a sexual shape dimorphism as a consequence of sexual selection differences. The present research focuses on the study of inter and intrasexual sexual shape dimorphism of two generalist genera of ground beetles Pterostichus and Carabus. Geometric morphometric methods were applied to five generalist species of ground beetles Carabus exaratus, C. granulatus, Pterostichus melanarius, P. niger, and P. oblongopunctatus and several multivariate analyses were applied for two different traits, abdomen and elytra. Three of the five species analyzed showed high levels of sex-based shape dimorphism. However, the most generalist species, P. melanarius and P. oblongopunctatus, did not evidence shape-based sexual dimorphism differentiation in both of the analyzed traits, as statistically confirmed based on the permutation of pairwise comparison of the Mahalanobis distances of a sex–species classifier. It is generally known that environmental stress in natural populations can affect the fitness expression, principally related to sexual fecundity, being that this pattern is more evident in non-generalist species. In our results, the contrary pattern was found, with the absence of sexual shape dimorphism for two of the three generalist species analyzed. On the other hand, the interspecies shape variation was clearly identified using principal component analysis of both of the analyzed traits. Finally, this research is the first to analyze the relationship between sexual shape dimorphism in Russian ground beetles, evidencing the lack of understanding of the mechanism underlying the sexual dimorphism, especially in species living in extreme environments.

scholarly journals Variation of the Three-Dimensional Femoral J-Curve in the Native Knee

2021 ◽  
Vol 11 (7) ◽  
pp. 592
Author(s):  
Sonja A. G. A. Grothues ◽  
Klaus Radermacher
Keyword(s):  
Geometric Parameter ◽  
Knee Kinematics ◽  
Size Variation ◽  
Principal Component ◽  
Parameter Analysis ◽  
Patient Specific ◽  
3D Analysis ◽  
Relative Location ◽  
Shape Variation ◽  
J Curve

The native femoral J-Curve is known to be a relevant determinant of knee biomechanics. Similarly, after total knee arthroplasty, the J-Curve of the femoral implant component is reported to have a high impact on knee kinematics. The shape of the native femoral J-Curve has previously been analyzed in 2D, however, the knee motion is not planar. In this study, we investigated the J-Curve in 3D by principal component analysis (PCA) and the resulting mean shapes and modes by geometric parameter analysis. Surface models of 90 cadaveric femora were available, 56 male, 32 female and two without respective information. After the translation to a bone-specific coordinate system, relevant contours of the femoral condyles were derived using virtual rotating cutting planes. For each derived contour, an extremum search was performed. The extremum points were used to define the 3D J-Curve of each condyle. Afterwards a PCA and a geometric parameter analysis were performed on the medial and lateral 3D J-Curves. The normalized measures of the mean shapes and the aspects of shape variation of the male and female 3D J-Curves were found to be similar. When considering both female and male J-Curves in a combined analysis, the first mode of the PCA primarily consisted of changes in size, highlighting size differences between female and male femora. Apart from changes in size, variation regarding aspect ratio, arc lengths, orientation, circularity, as well as regarding relative location of the 3D J-Curves was found. The results of this study are in agreement with those of previous 2D analyses on shape and shape variation of the femoral J-Curves. The presented 3D analysis highlights new aspects of shape variability, e.g., regarding curvature and relative location in the transversal plane. Finally, the analysis presented may support the design of (patient-specific) femoral implant components for TKA.

scholarly journals Ground beetles (Carabidae) of field margin habitats

Biologia ◽  
2020 ◽  
Vol 75 (10) ◽  
pp. 1631-1641
Author(s):  
Janina Bennewicz ◽  
Tadeusz Barczak
Keyword(s):  
Conservation Status ◽  
Ground Beetle ◽  
Abundant Species ◽  
Ground Beetles ◽  
Field Margin ◽  
Poecilus Cupreus ◽  
The Status ◽  
Beetle Assemblages ◽  
Anchomenus Dorsalis ◽  
Pterostichus Melanarius

Abstract The aim of this study was to identify the role of field margin habitats in preserving the diversity and abundance of ground beetle assemblages, including potentially entomophagous species and those with conservation status in Poland. Research material was collected in 2006–2007 in four types of margin habitats – a forest, bushes, ditches and in two arable fields. Insects were captured into pitfalls, without preservation liquid or bait added to the traps. Traps were inspected twice a week, between May and August, and one sample was a weekly capture. In field margin habitats the most abundant species were Limodromus assimilis, Anchomenus dorsalis, Pterostichus melanarius and Carabus auratus. A lower abundance of species was noted on fields, with dominant Poecilus cupreus and P. melanarius. The group of zoophagous carabids found in our study includes 30 species from field margin habitats, i.e. 37.5% of all captured Carabidae taxa and 58.3% of all specimens. The share of aphidophagous species was 84.9% among bushes, 86.7% near ditches, and 88.0% in the forest habitat. Several species captured during the study are under protection in Poland. These include the partly protected Carabus convexus, which also has the status of near threatened species, the partly protected Calosoma auropunctatum, and Broscus cephalotes. Considering all the investigated field margin habitats, ground beetles were most numerous in the oak-hornbeam habitat, defined as bushes, formed predominantly by Prunus spinosa, Crataegus leavigata, Sambucus nigra and Rosa canina. Thus, this habitat was the most important reservoir/refugium for the ground beetles.

scholarly journals To the question of the origin of the cultural assortment   of Dagestan apricots through assessing the variability   of leaf morphological characteristics

2019 ◽  
Vol 14 (3) ◽  
pp. 17-24
Author(s):  
D. M. Anatov ◽  
Z. M. Аsadulaev ◽  
R. M. Osmanov ◽  
K. I. Akhmedova
Keyword(s):  
Leaf Shape ◽  
Morphological Characteristics ◽  
Principal Component ◽  
Leaf Size ◽  
Shape Index ◽  
Botanical Garden ◽  
Mahalanobis Distances ◽  
Traditional Cultivars ◽  
Academy Of Sciences ◽  
Degree Of Similarity

Aim. The paper presents the results of assessment of the indigenous nature and  degree of similarity of apricot cultivars growing in the collection of the Mountain  Botanical Garden, Gunib, Dagestan, Russia based on a comparative analysis of the  variability of leaf morphological characteristics.   Material and Methods. The material assessed consisted of 33 apricot cultivars of  various ecological and geographical origins aggregated in the following groups: (a)  Dagestan – traditional cultivars; (b) Moscow ‐ selection from the Tsytsin Main Moscow Botanical Garden, Russian Academy of Sciences based on wild forms of Tajikistan and Kyrgyzstan; (c) European and (d) Asian ‐ from Central Asia, Tajikistan, China  and Altai.   Results. The closeness of Dagestan and European varieties in comparison with Asian  and Moscow varieties was shown. Most Dagestan (16 of 19) and European varieties  have round‐shaped leaves (leaf shape index 80‐ 100%), while those from Asia and  the Moscow Botanical Garden have leaves which are elongated elliptical and oval  (60‐80%). Using the method of principal component analysis (PCA), it was established that most cultivars of Dagestan origin have similar leaf shapes and sizes, of  which Tlama kurak (wide‐round), Hekobarsh (elongated) were distinguished by leaf  shape and Esdelik by leaf size.   Conclusion. Based on a discriminant analysis (Squared Mahalanobis Distances), it  was found that the indices of indicators of leaf attributes (width/length of leaf lamina; petiole length/length of lamina; apex angle/corner of leaf base) are more reliable criteria for differentiating apricot varieties into ecological and geographical  groups than their morphological characteristics.  

scholarly journals Individual variation of the masticatory system dominates 3D skull shape in the herbivory-adapted marsupial wombats

2019 ◽  
Author(s):  
Vera Weisbecker ◽  
Thomas Guillerme ◽  
Cruise Speck ◽  
Emma Sherratt ◽  
Hyab Mehari Abraha ◽  
...  
Keyword(s):  
Individual Variation ◽  
Principal Component ◽  
Individual Variability ◽  
Shape Variation ◽  
Mandibular Ramus ◽  
Geometric Morphometric ◽  
Skull Shape ◽  
Marsupial Species ◽  
Masticatory System ◽  
The Individual

AbstractBackgroundWithin-species skull shape variation of marsupial mammals is widely considered low and strongly size-dependent (allometric), possibly due to developmental constraints arising from the altricial birth of marsupials. However, species whose skulls are impacted by strong muscular stresses – particularly those produced through mastication of tough food items – may not display such intrinsic patterns very clearly because of the known plastic response of bone to muscle activity of the individual. In such cases, shape variation should not be dominated by allometry; ordination of shape in a geometric morphometric context through principal component analysis (PCA) should reveal main variation in areas under masticatory stress (incisor region/zygomatic arches/mandibular ramus); but this main variation should emerge from high individual variability and thus have low eigenvalues.ResultsWe assessed the evidence for high individual variation through 3D geometric morphometric shape analysis of crania and mandibles of thre species of grazing-specialized wombats, whose diet of tough grasses puts considerable strain on their masticatory system. As expected, we found little allometry and low Principal Component 1 (PC1) eigenvalues within crania and mandibles of all three species. Also as expected, the main variation was in the muzzle, zygomatic arches, and masticatory muscle attachments of the mandibular ramus. We then implemented a new test to ask if the landmark variation reflected on PC1 was reflected in individuals with opposite PC1 scores and with opposite shapes in Procrustes space. This showed that correspondence between individual and ordinated shape variation was limited, indicating high levels of individual variability in the masticatory apparatus.DiscussionOur results are inconsistent with hypotheses that skull shape variation within marsupial species reflects a constraint pattern. Rather, they support suggestions that individual plasticity can be an important determinant of within-species shape variation in marsupials (and possibly other mammals) with high masticatory stresses, making it difficult to understand the degree to which intrinsic constraint act on shape variation at the within-species level. We conclude that studies that link micro- and macroevolutionary patterns of shape variation might benefit from a focus on species with low-impact mastication, such as carnivorous or frugivorous species.

The Cheilosia canicularis group (Diptera: Syrphidae): species delimitation and evolutionary relationships based on wing geometric morphometrics

Zootaxa ◽  
2008 ◽  
Vol 1825 (1) ◽  
pp. 40 ◽  
Author(s):  
JASMINA LUDOŠKI ◽  
LJUBINKA FRANCUSKI ◽  
ANTE VUJIĆ ◽  
VESNA MILANKOV
Keyword(s):  
Sequence Data ◽  
Balkan Peninsula ◽  
Wing Shape ◽  
Canonical Variate ◽  
Wing Size ◽  
Shape Variation ◽  
Geometric Morphometric ◽  
Mahalanobis Distances ◽  
Size And Shape ◽  
Upgma Cluster Analysis

A landmark-based geometric morphometric approach was used to assess differences in the size and shape of wing among/within three species of the Cheilosia canicularis group (Diptera: Syrphidae): C. canicularis, C. himantopus and C. orthotricha. Wing size and shape variation was observed from 25, 176 and 41 specimens of C. canicularis, C. himantopus and C. orthotricha, respectively, collected from six localities on the Balkan Peninsula. Significant differences in wing size were obtained among the analysed species and canonical variate analysis showed that wing shape was sufficiently different to allow the correct classification of 73% individuals of C. canicularis, 80% of C. orthotricha and 94% of C. himantopus, and clear delimitation of the species pairs C. canicularis/C. orthotricha and C. himantopus/C. orthotricha. In all analysed species, the consistent sex dimorphism in wing shape was observed indicating that female specimens had shorter and broader wings than males. The UPGMA cluster analysis based on squared Mahalanobis distances revealed close accordance with previously published phylogenetic relationships of these species indicated by allozyme and DNA sequence data analysis. Our results suggested that wing parameters contain useful information in quantification phenotypic variation and identification of species in this challenging group for taxonomy and systematics.

scholarly journals Characterization of Ablated Bone and Muscle for Long-Pulsed Laser Ablation in Dry and Wet Conditions

Materials ◽  
2019 ◽  
Vol 12 (8) ◽  
pp. 1338 ◽  
Author(s):  
Nguendon Kenhagho ◽  
Shevchik ◽  
Saeidi ◽  
Faivre ◽  
Meylan ◽  
...  
Keyword(s):  
Acoustic Waves ◽  
Thermal Damage ◽  
Pulsed Laser ◽  
Principal Component ◽  
Classification Error ◽  
Ablation Efficiency ◽  
Mahalanobis Distances ◽  
Dry Conditions ◽  
Fast Healing

Smart laser technologies are desired that can accurately cut and characterize tissues, such as bone and muscle, with minimal thermal damage and fast healing. Using a long-pulsed laser with a 0.5–10  ms pulse width at a wavelength of 1.07  µm, we investigated the optimum laser parameters for producing craters with minimal thermal damage under both wet and dry conditions. In different tissues (bone and muscle), we analyzed craters of various morphologies, depths, and volumes. We used a two-way Analysis of Variance (ANOVA) test to investigate whether there are significant differences in the ablation efficiency in wet versus dry conditions at each level of the pulse energy. We found that bone and muscle tissue ablated under wet conditions produced fewer cracks and less thermal damage around the craters than under dry conditions. In contrast to muscle, the ablation efficiency of bone under wet conditions was not higher than under dry conditions. Tissue differentiation was carried out based on measured acoustic waves. A Principal Component Analysis of the measured acoustic waves and Mahalanobis distances were used to differentiate bone and muscle under wet conditions. Bone and muscle ablated in wet conditions demonstrated a classification error of less than 6.66 % and 3.33 %, when measured by a microphone and a fiber Bragg grating, respectively.

A Geometric Morphometric Assessment of Hand Shape and Comparison to the 2D:4D Digit Ratio as a Marker of Sexual Dimorphism

2013 ◽  
Vol 16 (2) ◽  
pp. 590-600 ◽  
Author(s):  
Paul G. Sanfilippo ◽  
Alex W. Hewitt ◽  
Jenny A. Mountain ◽  
David A. Mackey
Keyword(s):  
Sexual Dimorphism ◽  
Geometric Morphometrics ◽  
Shape Analysis ◽  
Twin Studies ◽  
Analytical Techniques ◽  
Shape Variation ◽  
Geometric Morphometric ◽  
Hand Shape ◽  
Physical Traits ◽  
Biological Shape

Twin studies are extremely useful for investigating hypotheses of genetic influence on a range of behavioral and physical traits in humans. Studies of physical traits, however, are usually limited to size-related biological characteristics because it is inherently difficult to quantify the morphological counterpart – shape. In recent years, the development of geometry-preserving analytical techniques built upon multivariate statistical methodologies has produced a new discipline in biological shape analysis known as geometric morphometrics. In this study of hand shape analysis, we introduce the reader already familiar with the field of twin research to the potential utility of geometric morphometrics and demonstrate the cross-discipline applicability of methods. We also investigate and compare the efficacy of the 2D:4D ratio, a commonly used marker of sexual dimorphism, to the fully multivariate approach of shape analysis in discriminating between male and female sex. Studies of biological shape variation utilizing geometric morphometric techniques may be completed with software freely available on the Internet and time invested to master the small learning curve in concepts and theory.

Morphological diversity of wild rabbit populations: implications for archaeology and palaeontology

2019 ◽  
Vol 128 (1) ◽  
pp. 211-224 ◽  
Author(s):  
Maxime Pelletier
Keyword(s):  
Sexual Dimorphism ◽  
Western Europe ◽  
Geographical Location ◽  
Morphological Diversity ◽  
Population Level ◽  
European Rabbit ◽  
Wild Rabbit ◽  
Shape Variation ◽  
Hunting Behaviour ◽  
Behavioural Aspects

Abstract Morphometric characteristics of the European rabbit (Oryctolagus cuniculus) are regularly used in archaeological and palaeontological studies to explore aspects of prehistoric human hunting behaviour, to reconstruct past environments or to define new species. However, the variability of these characteristics is still both poorly understood and under-documented due to a lack of population-level data that are essential for reliably interpreting the fossil record of this species. Here we address the morphometric diversity of wild rabbits in seven current populations from south-western Europe. Size variations in different skeletal parts were analysed to explore the potential impact of sexual dimorphism. A geometric morphometric analysis of the third lower premolar (p3) – a tooth commonly used to distinguish leporid species – was used to evaluate the relative effects of size, phylogeny, geographical location and climate on shape variation. The results show a negligible impact of sexual dimorphism, contradicting previous studies. We also demonstrate geography and climate to be the main factors driving variation in p3 shape, potentially calling into question criteria typically used to identify rabbit species. These results are valuable not only for palaeobiologists studying the taxonomy and the evolutionary history of the leporid family but also for archaeologists interested in the socio-economic and behavioural aspects of Palaeolithic human groups.

scholarly journals Context-dependent effects of relative temperature extremes on bill morphology in a songbird

2020 ◽  
Vol 7 (4) ◽  
pp. 192203
Author(s):  
Katie LaBarbera ◽  
Kyle J. Marsh ◽  
Kia R. R. Hayes ◽  
Talisin T. Hammond
Keyword(s):  
Extreme Environments ◽  
Negative Relationship ◽  
Environmental Context ◽  
Maximum Temperature ◽  
Relative Temperature ◽  
Generalist Species ◽  
Environmental Extremes ◽  
Bill Morphology ◽  
Thermoregulatory Function ◽  
Cool Climate

Species increasingly face environmental extremes. Morphological responses to changes in average environmental conditions are well documented, but responses to environmental extremes remain poorly understood. We used museum specimens to investigate relationships between a thermoregulatory morphological trait, bird bill surface area (SA) and a measure of short-term relative temperature extremity (RTE), which quantifies the degree that temperature maxima or minima diverge from the 5-year norm. Using a widespread, generalist species, Junco hyemalis , we found that SA exhibited different patterns of association with RTE depending on the overall temperature regime and on precipitation. While thermoregulatory function predicts larger SA at higher RTE, we found this only when the RTE existed in an environmental context that opposed it: atypically cold minimum temperature in a warm climate, or atypically warm maximum temperature in a cool climate. When environmental context amplified the RTE, we found a negative relationship between SA and RTE. We also found that the strength of associations between SA and RTE increased with precipitation. Our results suggest that trait responses to environmental variation may qualitatively differ depending on the overall environmental context, and that environmental change that extremifies already-extreme environments may produce responses that cannot be predicted from observations in less-extreme contexts.

scholarly journals High-Throughput Genotype, Morphology, and Quality Traits Evaluation for the Assessment of Genetic Diversity of Wheat Landraces from Sicily

Plants ◽  
2019 ◽  
Vol 8 (5) ◽  
pp. 116 ◽  
Author(s):  
Fiore ◽  
Mercati ◽  
Spina ◽  
Blangiforti ◽  
Venora ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Durum Wheat ◽  
Extreme Environments ◽  
Principal Component ◽  
Detailed Knowledge ◽  
Principal Coordinates Analysis ◽  
Principal Coordinates ◽  
Wide Range ◽  
Wheat Landraces ◽  
Durum Wheat Landraces

During the XX Century, the widespread use of modern wheat cultivars drastically reduced the cultivation of ancient landraces, which nowadays are confined to niche cultivation areas. Several durum wheat landraces adapted to the extreme environments of the Mediterranean region, are still being cultivated in Sicily, Italy. Detailed knowledge of the genetic diversity of this germplasm could lay the basis for their efficient management in breeding programs, for a wide-range range of traits. The aim of the present study was to characterize a collection of durum wheat landraces from Sicily, using single nucleotide polymorphisms (SNP) markers, together with agro-morphological, phenological and quality-related traits. Two modern cv. Simeto, Claudio, and the hexaploid landrace, Cuccitta, were used as outgroups. Cluster analysis and Principal Coordinates Analysis (PCoA) allowed us to identify four main clusters across the analyzed germplasm, among which a cluster included only historical and modern varieties. Likewise, structure analysis was able to distinguish the ancient varieties from the others, grouping the entries in seven cryptic genetic clusters. Furthermore, a Principal Component Analysis (PCA) was able to separate the modern testers from the ancient germplasm. This approach was useful to classify and evaluate Sicilian ancient wheat germplasm, supporting their safeguard and providing a genetic fingerprint that is necessary for avoiding commercial frauds to sustaining the economic profits of farmers resorting to landraces cultivation.

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