scholarly journals The Roles of Bacteria in Soil Organic Carbon Accumulation under Nitrogen Deposition in Stipa baicalensis Steppe

2020 ◽  
Vol 8 (3) ◽  
pp. 326
Author(s):  
Jie Qin ◽  
Hongmei Liu ◽  
Jianning Zhao ◽  
Hui Wang ◽  
Haifang Zhang ◽  
...  
Keyword(s):  
Organic Carbon ◽  
Bacterial Community ◽  
Soil Organic Carbon ◽  
Soil Ph ◽  
Bacterial Community Composition ◽  
N Deposition ◽  
Carbon Accumulation ◽  
Equation Modeling ◽  
N Addition ◽  
C Cycle

Grassland soil organic carbon (SOC) accounts for 15.5% of the SOC in reservoirs of terrestrial carbon (C) and is a major component of the global C cycle. Current and future reactive N deposited on grassland soils may alter biogeochemical processes and soil microbes. Microorganisms perform most of the decomposition on Earth and shift SOC accumulation. However, how variation in the identity and composition of the bacterial community influences SOC is far from clear. The objective of this study is to investigate the responses of SOC concentration to multiple rates of N addition as well as the roles of bacteria in SOC accumulation. We studied SOC storage and bacterial community composition under N addition treatments (0, 1.5, 3.0, 5.0, 10.0, 15.0, 20.0, and 30.0 g N·m−2 yr−1) in a 6-yr field experiment in a temperate grassland. We determined the soil inorganic nitrogen concentration and pH in a 0–10 cm soil layer. We used high-throughput genetic sequencing to detect bacteria. N addition led to significant increases in the concentrations of SOC. N addition reduced the soil pH but increased the NO3-N and NH4-N levels. The bacterial diversity was highest under low nitrogen addition. N addition increased the relative abundance of Proteobacteria, and Proteobacteria became the second dominant phylum under high N addition. Structural equation modeling further revealed that soil pH and bacterial community structure have an impact on SOC under N deposition. Nitrogen-regulated SOC is associated with Proteobacteria and Planctomycetes. These findings suggest that N deposition may alter the SOC content, highlighting the importance of understanding changes in the bacterial community for soil nutrients under N deposition.

Straw decreased N2O emissions from flooded paddy soils via altering denitrifying bacterial community compositions and soil organic carbon fractions

2020 ◽  
Vol 96 (5) ◽  
Author(s):  
Ning Wang ◽  
Jia-Lin Luo ◽  
Albert L Juhasz ◽  
Hong-Bo Li ◽  
Jian-Guang Yu
Keyword(s):  
Organic Carbon ◽  
Bacterial Community ◽  
Soil Organic Carbon ◽  
Community Composition ◽  
Bacterial Communities ◽  
Bacterial Community Composition ◽  
N2o Emissions ◽  
Carbon Fractions ◽  
Straw Return ◽  
Organic Carbon Fractions

ABSTRACT Straw return is widely applied to increase soil fertility and soil organic carbon storage. However, its effect on N2O emissions from paddy soil and the associated microbial mechanisms are still unclear. In this study, wheat straw was amended to two paddy soils (2% w/w) from Taizhou (TZ) and Yixing (YX), China, which were flooded and incubated for 30 d. Real-time PCR and Illumina sequencing were used to characterize changes in denitrifying functional gene abundance and denitrifying bacterial communities. Compared to unamended controls, straw addition significantly decreased accumulated N2O emissions in both TZ (5071 to 96 mg kg–1) and YX (1501 to 112 mg kg–1). This was mainly due to reduced N2O production with decreased abundance of major genera of nirK and nirS-bacterial communities and reduced nirK and nirS gene abundances. Further analyses showed that nirK-, nirS- and nosZ-bacterial community composition shifted mainly along the easily oxidizable carbon (EOC) arrows following straw amendment among four different soil organic carbon fractions, suggesting that increased EOC was the main driver of alerted denitrifying bacterial community composition. This study revealed straw return suppressed N2O emission via altering denitrifying bacterial community compositions and highlighted the importance of EOC in controlling denitrifying bacterial communities.

scholarly journals Organic mulching promotes soil organic carbon accumulation to deep soil layer in an urban plantation forest

2021 ◽  
Vol 8 (1) ◽  
Author(s):  
Xiaodan Sun ◽  
Gang Wang ◽  
Qingxu Ma ◽  
Jiahui Liao ◽  
Dong Wang ◽  
...  
Keyword(s):  
Organic Carbon ◽  
Soil Organic Carbon ◽  
Carbon Content ◽  
Fine Roots ◽  
Soil Layer ◽  
Carbon Accumulation ◽  
Bulk Soil ◽  
Organic Mulch ◽  
The Impact ◽  
Soc Fractions

Abstract Background Soil organic carbon (SOC) is important for soil quality and fertility in forest ecosystems. Labile SOC fractions are sensitive to environmental changes, which reflect the impact of short-term internal and external management measures on the soil carbon pool. Organic mulching (OM) alters the soil environment and promotes plant growth. However, little is known about the responses of SOC fractions in rhizosphere or bulk soil to OM in urban forests and its correlation with carbon composition in plants. Methods A one-year field experiment with four treatments (OM at 0, 5, 10, and 20 cm thicknesses) was conducted in a 15-year-old Ligustrum lucidum plantation. Changes in the SOC fractions in the rhizosphere and bulk soil; the carbon content in the plant fine roots, leaves, and organic mulch; and several soil physicochemical properties were measured. The relationships between SOC fractions and the measured variables were analysed. Results The OM treatments had no significant effect on the SOC fractions, except for the dissolved organic carbon (DOC). OM promoted the movement of SOC to deeper soil because of the increased carbon content in fine roots of subsoil. There were significant correlations between DOC and microbial biomass carbon and SOC and easily oxidised organic carbon. The OM had a greater effect on organic carbon fractions in the bulk soil than in the rhizosphere. The thinnest (5 cm) mulching layers showed the most rapid carbon decomposition over time. The time after OM had the greatest effect on the SOC fractions, followed by soil layer. Conclusions The frequent addition of small amounts of organic mulch increased SOC accumulation in the present study. OM is a potential management model to enhance soil organic matter storage for maintaining urban forest productivity.

Soil organic carbon storage by shaded and unshaded coffee systems and its implications for climate change mitigation in China

2021 ◽  
pp. 1-8
Author(s):  
Ziwei Xiao ◽  
Xuehui Bai ◽  
Mingzhu Zhao ◽  
Kai Luo ◽  
Hua Zhou ◽  
...  
Keyword(s):  
Climate Change ◽  
Linear Regression ◽  
Organic Carbon ◽  
Soil Organic Carbon ◽  
Multiple Linear Regression ◽  
Carbon Storage ◽  
Soil Ph ◽  
Soil Bulk Density ◽  
Soil N ◽  
And Storage

Abstract Shaded coffee systems can mitigate climate change by fixation of atmospheric carbon dioxide (CO2) in soil. Understanding soil organic carbon (SOC) storage and the factors influencing SOC in coffee plantations are necessary for the development of sound land management practices to prevent land degradation and minimize SOC losses. This study was conducted in the main coffee-growing regions of Yunnan; SOC concentrations and storage of shaded and unshaded coffee systems were assessed in the top 40 cm of soil. Relationships between SOC concentration and factors affecting SOC were analysed using multiple linear regression based on the forward and backward stepwise regression method. Factors analysed were soil bulk density (ρb), soil pH, total nitrogen of soil (N), mean annual temperature (MAT), mean annual moisture (MAM), mean annual precipitation (MAP) and elevations (E). Akaike's information criterion (AIC), coefficient of determination (R2), root mean square error (RMSE) and residual sum of squares (RSS) were used to describe the accuracy of multiple linear regression models. Results showed that mean SOC concentration and storage decreased significantly with depth under unshaded coffee systems. Mean SOC concentration and storage were higher in shaded than unshaded coffee systems at 20–40 cm depth. The correlations between SOC concentration and ρb, pH and N were significant. Evidence from the multiple linear regression model showed that soil bulk density (ρb), soil pH, total nitrogen of soil (N) and climatic variables had the greatest impact on soil carbon storage in the coffee system.

scholarly journals Effects of Simulated Nitrogen Deposition on the Bacterial Community of Urban Green Spaces

2021 ◽  
Vol 11 (3) ◽  
pp. 918
Author(s):  
Lingzi Mo ◽  
Augusto Zanella ◽  
Xiaohua Chen ◽  
Bin Peng ◽  
Jiahui Lin ◽  
...  
Keyword(s):  
Bacterial Community ◽  
Bacterial Diversity ◽  
Negative Impact ◽  
Bacterial Community Composition ◽  
N Deposition ◽  
Soil Bacterial Community ◽  
Rrna Gene ◽  
Soil Dna ◽  
Urban Green ◽  
Soil Bacterial

Continuing nitrogen (N) deposition has a wide-ranging impact on terrestrial ecosystems. To test the hypothesis that, under N deposition, bacterial communities could suffer a negative impact, and in a relatively short timeframe, an experiment was carried out for a year in an urban area featuring a cover of Bermuda grass (Cynodon dactylon) and simulating environmental N deposition. NH4NO3 was added as external N source, with four dosages (N0 = 0 kg N ha−2 y−1, N1 = 50 kg N ha−2 y−1, N2 = 100 kg N ha−2 y−1, N3 = 150 kg N ha−2 y−1). We analyzed the bacterial community composition after soil DNA extraction through the pyrosequencing of the 16S rRNA gene amplicons. N deposition resulted in soil bacterial community changes at a clear dosage-dependent rate. Soil bacterial diversity and evenness showed a clear trend of time-dependent decline under repeated N application. Ammonium nitrogen enrichment, either directly or in relation to pH decrease, resulted in the main environmental factor related to the shift of taxa proportions within the urban green space soil bacterial community and qualified as a putative important driver of bacterial diversity abatement. Such an impact on soil life induced by N deposition may pose a serious threat to urban soil ecosystem stability and surrounding areas.

scholarly journals Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

2009 ◽  
Vol 75 (15) ◽  
pp. 5111-5120 ◽  
Author(s):  
Christian L. Lauber ◽  
Micah Hamady ◽  
Rob Knight ◽  
Noah Fierer
Keyword(s):  
Bacterial Community ◽  
Soil Ph ◽  
Bacterial Communities ◽  
Bacterial Community Structure ◽  
Spatial Scales ◽  
Bacterial Community Composition ◽  
Phylogenetic Structure ◽  
Soil Bacterial Communities ◽  
Soil Bacterial Community Structure ◽  
Soil Bacterial

ABSTRACT Soils harbor enormously diverse bacterial populations, and soil bacterial communities can vary greatly in composition across space. However, our understanding of the specific changes in soil bacterial community structure that occur across larger spatial scales is limited because most previous work has focused on either surveying a relatively small number of soils in detail or analyzing a larger number of soils with techniques that provide little detail about the phylogenetic structure of the bacterial communities. Here we used a bar-coded pyrosequencing technique to characterize bacterial communities in 88 soils from across North and South America, obtaining an average of 1,501 sequences per soil. We found that overall bacterial community composition, as measured by pairwise UniFrac distances, was significantly correlated with differences in soil pH (r = 0.79), largely driven by changes in the relative abundances of Acidobacteria, Actinobacteria, and Bacteroidetes across the range of soil pHs. In addition, soil pH explains a significant portion of the variability associated with observed changes in the phylogenetic structure within each dominant lineage. The overall phylogenetic diversity of the bacterial communities was also correlated with soil pH (R2 = 0.50), with peak diversity in soils with near-neutral pHs. Together, these results suggest that the structure of soil bacterial communities is predictable, to some degree, across larger spatial scales, and the effect of soil pH on bacterial community composition is evident at even relatively coarse levels of taxonomic resolution.

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