scholarly journals A Preliminary Assessment of a Newly-Defined Multispectral Hue Space for Retrieving River Depth with Optical Imagery and In Situ Calibration Data

2021 ◽  
Vol 13 (21) ◽  
pp. 4435
Author(s):  
Nicolas Le Moine ◽  
Mounir Mahdade

Bathymetry is a key element in the modeling of river systems for flood mapping, geomorphology, or stream habitat characterization. Standard practices rely on the interpolation of in situ depth measurements obtained with differential GPS or total station surveys, while more advanced techniques involve bathymetric LiDAR or acoustic soundings. However, these high-resolution active techniques are not so easily applied over large areas. Alternative methods using passive optical imagery present an interesting trade-off: they rely on the fact that wavelengths composing solar radiation are not attenuated at the same rates in water. Under certain assumptions, the logarithm of the ratio of radiances in two spectral bands is linearly correlated with depth. In this study, we go beyond these ratio methods in defining a multispectral hue that retains all spectral information. Given n coregistered bands, this spectral invariant lies on the (n−2)-sphere embedded in Rn−1, denoted Sn−2 and tagged ‘hue hypersphere’. It can be seen as a generalization of the RGB ‘color wheel’ (S1) in higher dimensions. We use this mapping to identify a hue-depth relation in a 35 km reach of the Garonne River, using high resolution (0.50 m) airborne imagery in four bands and data from 120 surveyed cross-sections. The distribution of multispectral hue over river pixels is modeled as a mixture of two components: one component represents the distribution of substrate hue, while the other represents the distribution of ‘deep water’ hue; parameters are fitted such that membership probability for the ‘deep’ component correlates with depth.

Author(s):  
C. Karakizi ◽  
M. Oikonomou ◽  
K. Karantzalos

An assessment of the spectral discrimination between different vine varieties was undertaken using non-destructive remote sensing observations at the véraison period. During concurrent satellite, aerial and field campaigns, in-situ reflectance data were collected from a spectroradiometer, hyperspectral data were acquired from a UAV and multispectral data from a high-resolution satellite imaging sensor. Data were collected during a three years period (i.e, 2012, 2013 and 2014) over five wine-growing regions, covering more than 1000ha, in Greece. Data for more than twenty different vine varieties were processed and analysed. In particular, reflectance hyperspectral data from a spectroradiometer (GER 1500, Spectra Vista Corporation, 350-1050nm, 512 spectral bands) were calculated from the raw radiance values and then were correlated with the corresponding reflectance observations from the UAV and satellite data. Reflectance satellite data (WorldView-2, 400nm-1040nm, 8 spectral bands, DigitalGlobe), after the radiometric and atmospheric correction of the raw datasets, were classified towards the detection and the discrimination of the different vine varieties. The concurrent observations from in-situ hyperspectral, aerial hyperspectral and satellite multispectral data over the same vines were highly correlated. High correlations were, also, established for the same vine varieties (e.g., Syrah, Sauvignon Blanc) cultivated in different regions. The analysis of in-situ reflectance indicated that certain vine varieties, like Merlot, Sauvignon Blanc, Ksinomavro and Agiorgitiko possess specific spectral properties and detectable behaviour. These observations were, in most cases, in accordance with the classification results from the high resolution satellite data. In particular, Merlot and also Sauvignon Blanc were detected and discriminated with high accuracy rates. Surprisingly different clones from the same variety could be separated (e.g., clones of Syrah), while they were confused with other varieties (e.g., with Riesling).


2014 ◽  
Vol 7 (1) ◽  
pp. 305-334
Author(s):  
M. Riffler ◽  
S. Wunderle

Abstract. Lake water temperature (LWT) is an important driver of lake ecosystems and it has been identified as an indicator of climate change. Thus, the Global Climate Observing System (GCOS) lists LWT as an Essential Climate Variable (ECV). Although for some European lakes long in situ time series of LWT do exist, many lakes are not observed or only on a non-regular basis making these observations insufficient for climate monitoring. Satellite data can provide the information needed. However, only few satellite sensors offer the possibility to analyse time series which cover 25 years or more. The Advanced Very High Resolution Radiometer (AVHRR) is among these and has been flown as a heritage instrument for almost 35 years. It will be carried on for at least ten more years finally offering a unique opportunity for satellite-based climate studies. Herein we present a satellite-based lake surface water temperature (LSWT) data set for European (pre-alpine) water bodies based on the extensive AVHRR 1 km data record (1989–2013) of the Remote Sensing Research Group at the University of Bern. It has been compiled out of AVHRR/2 (NOAA-07, -09, -11, -14) and AVHRR/3 (NOAA-16, -17, -18, -19 and Metop-A) data. The high accuracy needed for climate related studies requires careful pre-processing and consideration of the atmospheric state. Especially data from NOAA-16 and prior satellites were prone to noise, e.g., due to transmission errors or fluctuations in the instrument's thermal state. This has resulted in partly corrupted thermal calibration data and may cause errors of up to several Kelvin in the final resulting LSWT. Thus, a multi-stage correction scheme has been applied to the data to minimize these artefacts. The LSWT retrieval is based on a simulation-based scheme making use of the Radiative Transfer for TOVS (RTTOV) Version 10 together with operational analysis and reanalysis data from the European Centre for Medium Range Weather Forecasts. The resulting LSWTs were extensively validated using in situ measurements from lakes with various sizes between 14 and 580 km2 and the resulting biases and RMSEs were found to be within the range of −0.4–0.6 K and 1.0–1.9 K, respectively. The upper limits of the reported errors could be rather attributed to uncertainties in the data comparison between in situ and satellite observations than inaccuracies of the satellite retrieval. The cross-platform consistency of the retrieval was found to be within ~0.2 K. A comparison with LSWT derived through global sea surface temperature (SST) algorithms shows lower RMSEs and biases for the simulation-based approach. A running project will apply the developed method to retrieve LSWT from the northern part of Finland to southern Italy to derive the climate signal of the last 30 years. The data are available at doi:10.1594/PANGAEA.831007.


Nanoscale ◽  
2021 ◽  
Author(s):  
Alexandre Berquand ◽  
Amandine Wahart ◽  
Aubéri Henry ◽  
Laetitia Gorisse ◽  
Pascal Maurice ◽  
...  

Atomic Force Microscopy imaging allows to correlate at high resolution local changes in the structure and the elastic properties of elastin fibers and of the surrounding matrix for mice aorta cross sections.


Author(s):  
Mihir Parikh

It is well known that the resolution of bio-molecules in a high resolution electron microscope depends not just on the physical resolving power of the instrument, but also on the stability of these molecules under the electron beam. Experimentally, the damage to the bio-molecules is commo ly monitored by the decrease in the intensity of the diffraction pattern, or more quantitatively by the decrease in the peaks of an energy loss spectrum. In the latter case the exposure, EC, to decrease the peak intensity from IO to I’O can be related to the molecular dissociation cross-section, σD, by EC = ℓn(IO /I’O) /ℓD. Qu ntitative data on damage cross-sections are just being reported, However, the microscopist needs to know the explicit dependence of damage on: (1) the molecular properties, (2) the density and characteristics of the molecular film and that of the support film, if any, (3) the temperature of the molecular film and (4) certain characteristics of the electron microscope used


Author(s):  
J. A. Pollock ◽  
M. Martone ◽  
T. Deerinck ◽  
M. H. Ellisman

Localization of specific proteins in cells by both light and electron microscopy has been facilitate by the availability of antibodies that recognize unique features of these proteins. High resolution localization studies conducted over the last 25 years have allowed biologists to study the synthesis, translocation and ultimate functional sites for many important classes of proteins. Recently, recombinant DNA techniques in molecular biology have allowed the production of specific probes for localization of nucleic acids by “in situ” hybridization. The availability of these probes potentially opens a new set of questions to experimental investigation regarding the subcellular distribution of specific DNA's and RNA's. Nucleic acids have a much lower “copy number” per cell than a typical protein, ranging from one copy to perhaps several thousand. Therefore, sensitive, high resolution techniques are required. There are several reasons why Intermediate Voltage Electron Microscopy (IVEM) and High Voltage Electron Microscopy (HVEM) are most useful for localization of nucleic acids in situ.


Author(s):  
Gary Bassell ◽  
Robert H. Singer

We have been investigating the spatial distribution of nucleic acids intracellularly using in situ hybridization. The use of non-isotopic nucleotide analogs incorporated into the DNA probe allows the detection of the probe at its site of hybridization within the cell. This approach therefore is compatible with the high resolution available by electron microscopy. Biotinated or digoxigenated probe can be detected by antibodies conjugated to colloidal gold. Because mRNA serves as a template for the probe fragments, the colloidal gold particles are detected as arrays which allow it to be unequivocally distinguished from background.


Author(s):  
Terrence Reilly ◽  
Al Pelillo ◽  
Barbara Miner

The use of transmission electron microscopes (TEM) has proven to be very valuable in the observation of semiconductor devices. The need for high resolution imaging becomes more important as the devices become smaller and more complex. However, the sample preparation for TEM observation of semiconductor devices have generally proven to be complex and time consuming. The use of ion milling machines usually require a certain degree of expertise and allow a very limited viewing area. Recently, the use of an ultra high resolution "immersion lens" cold cathode field emission scanning electron microscope (CFESEM) has proven to be very useful in the observation of semiconductor devices. Particularly at low accelerating voltages where compositional contrast is increased. The Hitachi S-900 has provided comparable resolution to a 300kV TEM on semiconductor cross sections. Using the CFESEM to supplement work currently being done with high voltage TEMs provides many advantages: sample preparation time is greatly reduced and the observation area has also been increased to 7mm. The larger viewing area provides the operator a much greater area to search for a particular feature of interest. More samples can be imaged on the CFESEM, leaving the TEM for analyses requiring diffraction work and/or detecting the nature of the crystallinity.


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