scholarly journals The role of mixotrophic protists in the biological carbon pump

2014 ◽  
Vol 11 (4) ◽  
pp. 995-1005 ◽  
Author(s):  
A. Mitra ◽  
K. J. Flynn ◽  
J. M. Burkholder ◽  
T. Berge ◽  
A. Calbet ◽  
...  

Abstract. The traditional view of the planktonic food web describes consumption of inorganic nutrients by photoautotrophic phytoplankton, which in turn supports zooplankton and ultimately higher trophic levels. Pathways centred on bacteria provide mechanisms for nutrient recycling. This structure lies at the foundation of most models used to explore biogeochemical cycling, functioning of the biological pump, and the impact of climate change on these processes. We suggest an alternative new paradigm, which sees the bulk of the base of this food web supported by protist plankton communities that are mixotrophic – combining phototrophy and phagotrophy within a single cell. The photoautotrophic eukaryotic plankton and their heterotrophic microzooplankton grazers dominate only during the developmental phases of ecosystems (e.g. spring bloom in temperate systems). With their flexible nutrition, mixotrophic protists dominate in more-mature systems (e.g. temperate summer, established eutrophic systems and oligotrophic systems); the more-stable water columns suggested under climate change may also be expected to favour these mixotrophs. We explore how such a predominantly mixotrophic structure affects microbial trophic dynamics and the biological pump. The mixotroph-dominated structure differs fundamentally in its flow of energy and nutrients, with a shortened and potentially more efficient chain from nutrient regeneration to primary production. Furthermore, mixotrophy enables a direct conduit for the support of primary production from bacterial production. We show how the exclusion of an explicit mixotrophic component in studies of the pelagic microbial communities leads to a failure to capture the true dynamics of the carbon flow. In order to prevent a misinterpretation of the full implications of climate change upon biogeochemical cycling and the functioning of the biological pump, we recommend inclusion of multi-nutrient mixotroph models within ecosystem studies.

2013 ◽  
Vol 10 (8) ◽  
pp. 13535-13562 ◽  
Author(s):  
A. Mitra ◽  
K. J. Flynn ◽  
J. M. Burkholder ◽  
T. Berge ◽  
A. Calbet ◽  
...  

Abstract. The traditional view of the planktonic foodweb describes consumption of inorganic nutrients by photo-autotrophic phytoplankton, which in turn supports zooplankton and ultimately higher trophic levels. Pathways centred on bacteria provide mechanisms for nutrient recycling. This structure lies at the foundation of most models used to explore biogeochemical cycling, functioning of the biological pump, and the impact of climate change on these processes. We suggest an alternative paradigm, which sees the bulk of the base of this foodweb supported by protist plankton (phytoplankton and microzooplankton) communities that are mixotrophic – combining phototrophy and phagotrophy within a~single cell. The photoautotrophic eukaryotic plankton and their heterotrophic microzooplankton grazers dominate only within immature environments (e.g., spring bloom in temperate systems). With their flexible nutrition, mixotrophic protists dominate in more mature systems (e.g., temperate summer, established eutrophic systems and oligotrophic systems); the more stable water columns suggested under climate change may also be expected to favour these mixotrophs. We explore how such a predominantly mixotrophic structure affects microbial trophic dynamics and the biological pump. The mixotroph dominated structure differs fundamentally in its flow of energy and nutrients, with a shortened and potentially more efficient chain from nutrient regeneration to primary production. Furthermore, mixotrophy enables a direct conduit for the support of primary production from bacterial production. We show how the exclusion of an explicit mixotrophic component in studies of the pelagic microbial communities leads to a failure to capture the true dynamics of the carbon flow. In order to prevent a misinterpretation of the full implications of climate change upon biogeochemical cycling and the functioning of the biological pump, we recommend inclusion of multi-nutrient mixotroph models within ecosystem studies.


2017 ◽  
Vol 284 (1867) ◽  
pp. 20171772 ◽  
Author(s):  
Lai Zhang ◽  
Daisuke Takahashi ◽  
Martin Hartvig ◽  
Ken H. Andersen

Climate change affects ecological communities through its impact on the physiological performance of individuals. However, the population dynamic of species well inside their thermal niche is also determined by competitors, prey and predators, in addition to being influenced by temperature changes. We use a trait-based food-web model to examine how the interplay between the direct physiological effects from temperature and the indirect effects due to changing interactions between populations shapes the ecological consequences of climate change for populations and for entire communities. Our simulations illustrate how isolated communities deteriorate as populations go extinct when the environment moves outside the species' thermal niches. High-trophic-level species are most vulnerable, while the ecosystem function of lower trophic levels is less impacted. Open communities can compensate for the loss of ecosystem function by invasions of new species. Individual populations show complex responses largely uncorrelated with the direct impact of temperature change on physiology. Such complex responses are particularly evident during extinction and invasion events of other species, where climatically well-adapted species may be brought to extinction by the changed food-web topology. Our results highlight that the impact of climate change on specific populations is largely unpredictable, and apparently well-adapted species may be severely impacted.


2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Anna Åkesson ◽  
Alva Curtsdotter ◽  
Anna Eklöf ◽  
Bo Ebenman ◽  
Jon Norberg ◽  
...  

AbstractEco-evolutionary dynamics are essential in shaping the biological response of communities to ongoing climate change. Here we develop a spatially explicit eco-evolutionary framework which features more detailed species interactions, integrating evolution and dispersal. We include species interactions within and between trophic levels, and additionally, we incorporate the feature that species’ interspecific competition might change due to increasing temperatures and affect the impact of climate change on ecological communities. Our modeling framework captures previously reported ecological responses to climate change, and also reveals two key results. First, interactions between trophic levels as well as temperature-dependent competition within a trophic level mitigate the negative impact of climate change on biodiversity, emphasizing the importance of understanding biotic interactions in shaping climate change impact. Second, our trait-based perspective reveals a strong positive relationship between the within-community variation in preferred temperatures and the capacity to respond to climate change. Temperature-dependent competition consistently results both in higher trait variation and more responsive communities to altered climatic conditions. Our study demonstrates the importance of species interactions in an eco-evolutionary setting, further expanding our knowledge of the interplay between ecological and evolutionary processes.


2014 ◽  
Vol 11 (2) ◽  
pp. 293-308 ◽  
Author(s):  
E. E. Popova ◽  
A. Yool ◽  
Y. Aksenov ◽  
A. C. Coward ◽  
T. R. Anderson

Abstract. The Arctic Ocean is a region that is particularly vulnerable to the impact of ocean acidification driven by rising atmospheric CO2, with potentially negative consequences for calcifying organisms such as coccolithophorids and foraminiferans. In this study, we use an ocean-only general circulation model, with embedded biogeochemistry and a comprehensive description of the ocean carbon cycle, to study the response of pH and saturation states of calcite and aragonite to rising atmospheric pCO2 and changing climate in the Arctic Ocean. Particular attention is paid to the strong regional variability within the Arctic, and, for comparison, simulation results are contrasted with those for the global ocean. Simulations were run to year 2099 using the RCP8.5 (an Intergovernmental Panel on Climate Change (IPCC) Fifth Assessment Report (AR5) scenario with the highest concentrations of atmospheric CO2). The separate impacts of the direct increase in atmospheric CO2 and indirect effects via impact of climate change (changing temperature, stratification, primary production and freshwater fluxes) were examined by undertaking two simulations, one with the full system and the other in which atmospheric CO2 was prevented from increasing beyond its preindustrial level (year 1860). Results indicate that the impact of climate change, and spatial heterogeneity thereof, plays a strong role in the declines in pH and carbonate saturation (Ω) seen in the Arctic. The central Arctic, Canadian Arctic Archipelago and Baffin Bay show greatest rates of acidification and Ω decline as a result of melting sea ice. In contrast, areas affected by Atlantic inflow including the Greenland Sea and outer shelves of the Barents, Kara and Laptev seas, had minimal decreases in pH and Ω because diminishing ice cover led to greater vertical mixing and primary production. As a consequence, the projected onset of undersaturation in respect to aragonite is highly variable regionally within the Arctic, occurring during the decade of 2000–2010 in the Siberian shelves and Canadian Arctic Archipelago, but as late as the 2080s in the Barents and Norwegian seas. We conclude that, for future projections of acidification and carbonate saturation state in the Arctic, regional variability is significant and needs to be adequately resolved, with particular emphasis on reliable projections of the rates of retreat of the sea ice, which are a major source of uncertainty.


2016 ◽  
Author(s):  
Hadi Eskandari Dameneh ◽  
Moslem Borji ◽  
Hassan Khosravi ◽  
Ali Salajeghe

Abstract. Persistence of widespread degradation in arid and semi-arid region of Iran necessitates using of monitoring and evaluation systems with appropriate accuracy to determine the degradation process and adoption of early warning systems; because after transition from some thresholds, effective reversible function of ecosystems will not be very easy. This paper tries to monitor the degradation and desertification trends in three land uses including range, forest and desert lands affected by climate change in Tehran province for 2000s and 2030s. For assessing climate changes of Mehrabad synoptic stations the data of two emission scenarios including A2 and B2 were used using statistical downscaling techniques and data generated by SDSM model. The index of net primary production resulting from MODIS satellite images was employed as an indicator of destruction from 2001 to 2010. The results showed that temperature is the most effective driver force which alters the net primary production in rangeland, forest and desert ecosystems of Tehran province. On the basis of monitoring findings under real conditions, in the 2000s, over 60 % of rangelands and 80 % of the forests have been below the average production in the province. On the other hand, the long-term average changes of NPP in rangeland and forests indicated the presence of relatively large areas of these land uses with production rate lower than the desert. The results also showed that, assuming the existence of circumstances of each emission scenarios, the desertification status will not improve significantly in the rangelands and forests of Tehran province.


2020 ◽  
Author(s):  
David I. Armstrong McKay ◽  
Sarah E. Cornell ◽  
Katherine Richardson ◽  
Johan Rockström

Abstract. The Earth’s oceans are one of the largest sinks in the Earth system for anthropogenic CO2 emissions, acting as a negative feedback on climate change. Earth system models predict, though, that climate change will lead to a weakening ocean carbon uptake rate as warm water holds less dissolved CO2 and biological productivity declines. However, most Earth system models do not incorporate the impact of warming on bacterial remineralisation and rely on simplified representations of plankton ecology that do not resolve the potential impact of climate change on ecosystem structure or elemental stoichiometry. Here we use a recently-developed extension of the cGEnIE Earth system model (ecoGEnIE) featuring a trait-based scheme for plankton ecology (ECOGEM), and also incorporate cGEnIE's temperature-dependent remineralisation (TDR) scheme. This enables evaluation of the impact of both ecological dynamics and temperature-dependent remineralisation on the soft-tissue biological pump in response to climate change. We find that including TDR strengthens the biological pump relative to default runs due to increased nutrient recycling, while ECOGEM weakens the biological pump by enabling a shift to smaller plankton classes. However, interactions with concurrent ocean acidification cause opposite sign responses for the carbon sink in both cases: TDR leads to a smaller sink relative to default runs whereas ECOGEM leads to a larger sink. Combining TDR and ECOGEM results in a net strengthening of the biological pump and a small net reduction in carbon sink relative to default. These results clearly illustrate the substantial degree to which ecological dynamics and biodiversity modulate the strength of climate-biosphere feedbacks, and demonstrate that Earth system models need to incorporate more ecological complexity in order to resolve carbon sink weakening.


1994 ◽  
Vol 51 (9) ◽  
pp. 2034-2044 ◽  
Author(s):  
Alain F. Vézina ◽  
Michael L. Pace

We used inverse methods to reconstruct carbon flows in experimental lakes where the fish community had been purposely altered. These analyses were applied to three years of data from a reference lake and two experimental lakes located in Gogebic County, Michigan. We reconstructed seasonally averaged flows among two size groups of phytoplankton, heterotrophic bacteria, microzooplankton, cladocerans, and copepods. The inverse analysis produced significantly different flow networks for the different lakes that agreed qualitatively with known chemical and biological differences between lakes and with other analyses of the impact of fish manipulations on food web structure and dynamics. The results pointed to alterations in grazing pressure on the phytoplankton that parallel changes in the size and abundance of cladocerans and copepods among lakes. Estimated flows through the microbial food web indicated low bacterial production efficiencies and small carbon transfers from the microbial food web to the larger zooplankton. This study demonstrates the use of inverse methods to identify and compare flow patterns across ecosystems and suggests that microbial flows are relatively insensitive to changes at the upper trophic levels.


2013 ◽  
Vol 10 (1) ◽  
pp. 1421-1450 ◽  
Author(s):  
S. Henson ◽  
H. Cole ◽  
C. Beaulieu ◽  
A. Yool

Abstract. The seasonal cycle (i.e. phenology) of oceanic primary production (PP) is expected to change in response to climate warming. Here, we use output from 6 global biogeochemical models to examine the response in the seasonal amplitude of PP and timing of peak PP to the IPCC AR5 warming scenario. We also investigate whether trends in PP phenology may be more rapidly detectable than trends in PP itself. The seasonal amplitude of PP decreases by an average of 1–2% per year by 2100 in most biomes, with the exception of the Arctic which sees an increase of ~1% per year. This is accompanied by an advance in the timing of peak PP by ~0.5–1 months by 2100 over much of the globe, and particularly pronounced in the Arctic. These changes are driven by an increase in seasonal amplitude of sea surface temperature (where the maxima get hotter faster than the minima) and a decrease in the seasonal amplitude of the mixed layer depth and surface nitrate concentration. Our results indicate a transformation of currently strongly seasonal (bloom forming) regions, typically found at high latitudes, into weakly seasonal (non-bloom) regions, characteristic of contemporary subtropical conditions. On average, 36 yr of data are needed to detect a climate change-driven trend in the seasonal amplitude of PP, compared to 32 yr for mean annual PP. We conclude that analysis of phytoplankton phenology is not necessarily a shortcut to detecting climate change impacts on ocean productivity.


Author(s):  
Linda Buholce ◽  
Vita Līcīte ◽  
Elmīra Boikova ◽  
Uldis Botva

AbstractProtozooplankton are dominant grazers of phytoplankton and an important component of the microbial food web, as a link between pico and nanoplankton to higher trophic levels. Their fast growing rate, relative abundance, biomass and diversity are used as indicators of organic and toxic pollution. The impact of urbanisation on ecosystems and their sustainability and biodiversity have recently been much studied. We studied the protozooplankton ciliate communities during the vegetation period from April to October in two small lakes (Bābelītis, Gaiļezers) and two reservoirs (Bolderāja, Saurieši). The largest peak of biomass (15.7 × 102 mg/l) was found in Gaiļezers Lake in August and of abundance (60.2 × 103 org/l) in Bābelītis Lake in July. The lowest biomass (0.006 mg/l) and abundance (0.12 × 103 org/l) were found in the Saurieši Reservoir station. The most abundant ciliates were from the order Oligotrichida.


2018 ◽  
Author(s):  
Gustavo Yunda-Guarin ◽  
Philippe Archambault ◽  
Guillaume Massé ◽  
Christian Nozais

In polar areas, the pelagic-benthic coupling plays a fundamental role in ensuring organic matter flow across depths and trophic levels. Climate change impacts the Arctic’s physical environment and ecosystem functioning, affecting the sequestration of carbon, the structure and efficiency of the benthic food web and its resilience.In the Arctic Ocean, highest atmospheric warming tendencies (by ~0.5°C) occur in the east of Baffin Bay making this area an ideal site to study the effects of climate change on benthic communities. We sampled epibenthic organisms at 13 stations bordering the sea ice between June and July 2016. The epibenthic taxonomic composition was identified and grouped by feeding guilds. Isotopic signatures (δ13C - δ15N), trophic levels and trophic separation and redundancy were measured and quantified at each station. In the light of the results obtained, the stability of the benthic community in the Baffin Bay at the sea ice edge is discussed.


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