Biodiversity of heat-resistant ascomycetes from semi-arid soils in Argentina

Mycotaxon ◽  
2020 ◽  
Vol 135 (3) ◽  
pp. 535-558
Author(s):  
Stella Maris Romero ◽  
Andrea Irene Romero ◽  
Alberto Miguel Stchigel ◽  
Ernesto Rodríguez Andrade ◽  
Viviana Andrea Barrera ◽  
...  

Artificial thermal shock conducted on 50 soil samples from a semi-arid geographic region (Catamarca and La Rioja provinces) in northern Argentina yielded 34 heat-resistant fungal strains. These strains were assigned to seventeen taxa in ten ascomycete genera: Arthrinium (1), Aspergillus (3), Epicoccum (1), Gilmaniella (1), Hamigera (2), Leiothecium (1), Penicillium (2), Talaromyces (4), Trichocladium (1), and Trichoderma (1). All strains were identified by phenotypic features, with molecular data additionally obtained for eleven strains. Five species are reported for the first time in Argentina.

2020 ◽  
Author(s):  
Houda Ouriemmi ◽  
Petra S Kidd ◽  
Ángeles Prieto-Fernández ◽  
Beatriz Rodriguez-Garrido ◽  
Mohamed Moussa ◽  
...  

<p>Soils from arid and semi-arid ecosystems are generally very low in organic matter content, poor in nutrients and typically with sandy texture.  The application of different organic amendments has been proposed as an adequate approach to improve the quality of these soils for their use in agriculture. The use of organic wastes of different origins (agricultural, industrial, urban, etc.) as soil amendments has a dual goal: i) improving soil fertility and quality, ii) reducing the environmental problem that poses the disposal of these residues. However, despite of the beneficial effects of these residues, undesirable changes may also occur in agricultural soils after their addition. For example, the presence of various pollutants of anthropogenic origin in organic wastes may cause adverse effects on soil microbiota.  Generally, the arid and semi-arid soils of Tunisia are well characterised. However, the use of organic amendments to improve the quality of these soils has been scarcely investigated. Soil biochemical properties, and specifically soil enzyme activities, have been often used to investigate the impact of different amendments on soil quality, because they are highly sensitive to human or environmental perturbations.</p><p>In this work, the results of a field trial established for investigating the effectiveness of three organic residues (composted municipal solid waste, composted sewage sludge and farmyard manure) to improve the quality of one agricultural soil from Tunisia are reported. The soil had a sandy texture, alkaline pH (pH 8.3) and was very poor in organic matter (0.21 and 0.03% of total C and N, respectively). Each of the organic residues was applied in triplicate at three different doses in nine sub-plots randomly distributed; three untreated sub-plots were also established for comparison. One, 6 and 18 months after the soil amendments, surface (0-20 cm) soil samples were collected from all the treated and untreated subplots. The soil samples were analysed for the enzyme activities of four hydrolases involved in the C, N, P and S cycles and for an oxidoreductase (dehydrogenase) reflecting soil microbial activity. All the soil samples were also characterised for their main physicochemical properties.</p><p>Addition of the three organic amendments induced slight increases of the total organic carbon and nutrients content; however, the improvements observed were generally not related with the amount of applied residue. The activity of the enzymes increased after the application of the three residues, but these increments were not correlated with the dose of residue and did not consistently varied with the time elapsed after residue application. Generally, the highest increases in absolute values were observed for manure-amended soils, but when the activities were considered in relation to the total organic C of the soils, the sludge amended soils appeared to be the most favoured. The results are discussed with regards to their implications for improving very poor agricultural soils.</p><p><strong>Acknowledgements:</strong> This research was financially supported by the Xunta de Galicia (IN607A 2017/6), UE Interreg-Sudoe program (SOE1/P5/E0189) and the Tunisian Ministry of Higher Education and Scientific Research. H. Oueriemmi thanks founding support of Erasmus plus program for her stay at the IIAG-CSIC.</p>


2020 ◽  
Vol 25 (12) ◽  
pp. 2172-2189
Author(s):  
Wojciech Niedbała ◽  
Katarzyna Buczkowska

Seven soil samples have been collected on four islands of the Azores, in which 14 species of ptyctimous mites (Acari, Oribatida) were found. One new species Phthiracarus andreasi Niedbała sp. nov. from Faial Island is described. Four species have been recorded for the first time from the Azores. Molecular analysis showed that the differences in the sculpture patterns in Euphthiracarus excultus Pérez-Iñigo, 1987 represent within-species variability. However, the length of body setae can separate two different species: Phthiracarus atlanticus Pérez-Iñigo, 1987 sensu stricto and Phthiracarus falciformis Morell & Subías, 1991, despite the absence of any other morphological differences. On the basis of our morphological and molecular data, a key to species from the Azores is provided. 


Phytotaxa ◽  
2018 ◽  
Vol 351 (1) ◽  
pp. 53
Author(s):  
CARLOS A.F. DE SOUZA ◽  
KERSTIN VOIGT ◽  
LUCIANA SARTORI GURGEL ◽  
THALLINE R.L. CORDEIRO ◽  
RAFAEL J.V. OLIVEIRA ◽  
...  

During a survey of Mucorales in fragments of an Atlantic Upland Forest inserted in the semiarid region of Pernambuco, Brazil, a specimen of Mucor was isolated from soil samples. The specimen was characterized based on morphological, physiological and molecular data (ITS and LSU rDNA regions). The isolate produces intensely branched sporangiophores commonly with between one and several septa with mostly applanate columellae. The sporangiophores were smooth-walled and varied in shape and size, while some were subglobose. The best growth was at 25°C but there was also good growth at 30°C. Based on the evidence of the analyzed datasets a new species of Mucor is proposed. A detailed description of the new specimen of Mucor from the Brazilian semi-arid region are provided.


Nematology ◽  
2005 ◽  
Vol 7 (1) ◽  
pp. 133-147 ◽  
Author(s):  
Paul De Ley ◽  
Rita Van Driessche ◽  
August Coomans

AbstractCarcharolaimus ramirezi was found in six soil samples from four islands of the Galápagos Archipelago. It is described for the first time since its original discovery, with particular emphasis on the morphology of its anterior end as seen under light microscope and SEM. Six large, but thin, liplets overhang the labial basket, which consists of thick plates ornamented with irregular ridges and denticles. Posterior to the labial basket, six pillars form a postlabial cage and provide attachment for eight dilatatores buccae. The species can survive desiccation and is probably well adapted to arid soils. Paratypes of C. bediensis were also studied and revealed that this species is actually synonymous with C. banaticus, rather than being very close to C. ramirezi as suggested by previous descriptions. The recently proposed genus Carcharodiscus is rejected, and the possible synonymy of Carcharolaimus with the senior genus Antholaimus is noted. A compendium to the genus Carcharolaimus is provided.


Phytotaxa ◽  
2018 ◽  
Vol 351 (1) ◽  
pp. 53 ◽  
Author(s):  
CARLOS A.F. DE SOUZA ◽  
KERSTIN VOIGT ◽  
LUCIANA SARTORI GURGEL ◽  
THALLINE R.L. CORDEIRO ◽  
RAFAEL J.V. OLIVEIRA ◽  
...  

During a survey of Mucorales in fragments of an Atlantic Upland Forest inserted in the semiarid region of Pernambuco, Brazil, a specimen of Mucor was isolated from soil samples. The specimen was characterized based on morphological, physiological and molecular data (ITS and LSU rDNA regions). The isolate produces intensely branched sporangiophores commonly with between one and several septa with mostly applanate columellae. The sporangiophores were smooth-walled and varied in shape and size, while some were subglobose. The best growth was at 25°C but there was also good growth at 30°C. Based on the evidence of the analyzed datasets a new species of Mucor is proposed. A detailed description of the new specimen of Mucor from the Brazilian semi-arid region are provided.


2017 ◽  
Vol 48 (2) ◽  
Author(s):  
R. A. Al-Tamimi

This research was conducted to study potassium status and forms in some desert Torrifluvents soil, from south of Libya and to clarify the effect of cultivation on its forms. Composite soil samples were collected from surface soils (0-30 cm) of some cultivated fields and from larva regions besides these fields. Various forms of potassium were determined i.e. soluble-K, NH4OAC extractable-K, reserve-K, sulphuric acid-K, boiling nitric acid-K to determine primary step-K and total step-K, and total K. Results indicated that all soils have high content of soluble and exchangeable potassium, and within the range of arid and semi–arid soils. Reserve-K was ranged between 0.359– 3.422 cmol kg-1 with an average of 1.702 and 2.637 cmol kg-1 in cultivated and virgin soils respectively. All soils had low content of primary step which ranged between 0.214-1.294 cmol kg-1 with an average of 0.522 and 0.926 cmol kg-1 in cultivated and virgin soils respectively. Total step potassium was ranged between 0.982–5.995 cmol kg-1 with average of 2.480 and 3.765 cmol kg-1 for cultivated and larva soils respectively. Total potassium concentration was between 15.16–36.71 and 23.53-30.06 cmol kg-1 with average of 24.52 and 26.38 in cultivated and virgin soils respectively. All forms of potassium were decreased as a result of cultivation. Apart from K-HCl and total K, the rest forms of potassium were significantly correlated with each other's.


Rodriguésia ◽  
2020 ◽  
Vol 71 ◽  
Author(s):  
Nilo Gabriel Soares Fortes ◽  
Maiara Araújo Lima dos Santos ◽  
Nadja Santos Vitória

Abstract Apiosordaria is a genus of fungus with species commonly reported inhabiting soil or herbivore feces. However, studies related to the association of representatives of this genus to plants, especially in semi-arid ecosystems, are still non-existent. In this work we documented a new occurrence for Brazil of a species of Apiosordaria, associated with the palm Syagrus coronata. The collections were carried out at the Raso da Catarina Ecological Station and the analyzes were carried out at the Laboratory of Sciences of the Bahia State University, Campus VIII, Paulo Afonso. From the topographic analysis of the plant substrate in stereomicroscope and the evaluation of fungal structures under optical light microscope, the species was identified as Apiosordaria nigeriensis. This fungus was reported for the first time in Enugu, Nigeria, after being isolated from soil samples. In this work, we report the second occurrence of A. nigeriensis to the world, being the first to Brazil, representing the first record for the Americas, and highlighting the palm S. coronata as the first botanical host colonized by the species. These data broaden the knowledge about the geographic distribution of the genus, especially on the microdiversity for the caatinga biome.


2021 ◽  
Vol 41 (2) ◽  
Author(s):  
Anton Urfels ◽  
Andrew J. McDonald ◽  
Gerardo van Halsema ◽  
Paul C. Struik ◽  
Pankaj Kumar ◽  
...  

AbstractTimely crop planting is a foundation for climate-resilient rice-wheat systems of the Eastern Gangetic Plains—a global food insecurity and poverty hotspot. We hypothesize that the capacity of individual farmers to plant on time varies considerably, shaped by multifaceted enabling factors and constraints that are poorly understood. To address this knowledge gap, two complementary datasets were used to characterize drivers and decision processes that govern the timing of rice planting in this region. The first dataset was a large agricultural management survey (rice-wheat: n = 15,245; of which rice: n = 7597) from a broad geographic region that was analyzed by machine learning methods. The second dataset was a discussion-based survey (n = 112) from a more limited geography that we analyzed with graph theory tools to elicit nuanced information on planting decisions. By combining insights from these methods, we show for the first time that differences in rice planting times are primarily shaped by ecosystem and climate factors while social factors play a prominent secondary role. Monsoon onset, surface and groundwater availability, and land type determine village-scale mean planting times whereas, for resource-constrained farmers who tend to plant later ceteris paribus, planting is further influenced by access to farm machinery, seed, fertilizer, and labor. Also, a critical threshold for economically efficient pumping appears at a groundwater depth of around 4.5 m; below this depth, farmers do not irrigate and delay planting. Without collective action to spread risk through synchronous timely planting, ecosystem factors such as threats posed by pests and wild animals may further deter early planting by individual farmers. Accordingly, we propose a three-pronged strategy that combines targeted strengthening of agricultural input chains, agroadvisory development, and coordinated rice planting and wildlife conservation to support climate-resilient agricultural development in the Eastern Gangetic Plains.


CATENA ◽  
2021 ◽  
Vol 206 ◽  
pp. 105554
Author(s):  
P.I. Kalinin ◽  
I.Yu. Kudrevatykh ◽  
V.V. Malyshev ◽  
L.S. Pilguy ◽  
A.V. Buhonov ◽  
...  

Zootaxa ◽  
2021 ◽  
Vol 4926 (3) ◽  
pp. 401-416
Author(s):  
MOHAMMAD HUSSAIN FALAHZADAH ◽  
EBRAHIM SHOKOOHI ◽  
GHOLAM HOSSEIN MORAVEJ ◽  
PHATU WILLIAM MASHELA ◽  
ABDUL KHALID MADADI ◽  
...  

Several soil samples from different habitats in Badakhshan province of Afghanistan were collected to isolate and characterize bacteria feeding nematodes. The Galleria mellonella-baiting method was used for the isolation of the Afghan insect-associated nematodes. The nematodes were studied using morphological and morphometric data. The Oscheius specimen was characterized by a longer body (630–820 µm) and shorter pharynx (125–145 µm), whereas other morphological characters were not unusual. The Diploscapter specimen had an annulated cuticle, with lip region width 1.5 times shorter than the stoma, and had separated pharyngeal corpus from the isthmus and vulva located in the middle of the body. The molecular data were derived using three loci; 18S, 28S (D2/D3 segment), and ITS rRNA region, which were utilized to measure the genetic distance. The phylogenetic analysis was conducted to reconstruct the relationship tree. Both morphological and molecular approaches confirmed the identity of nematode isolates as Oscheius tipulae and Diploscapter coronatus. This is the first report of insect-associated nematodes from the soil of Afghanistan. Both species were capable of infecting and killing G. mellonella larvae in less than 96 h. 


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