The microbiome of the pelagic tunicate Dolioletta gegenbauri: a potential link between the grazing and microbial food web

Doliolids often form massive blooms during upwelling conditions in sub-tropical shelves. However, their trophic role, including their nutritious fecal pellets, in pelagic marine food webs remains poorly investigated. In this study, we performed three independent feeding experiments of cultured Dolioletta gegenbauri and used qPCR analysis and 16S rRNA metabarcoding to characterize the microbial community associated with full gut (FG) and empty (EG) doliolids, fresh (FP2Hrs) and senescing (FP24Hrs) fecal pellets, and the surrounding natural seawater (SW). Bacterial abundance (i.e., 16S rRNA gene copies) in EG samples was an order of magnitude lower than in SW and three orders lower than in FP24Hrs. Diversity analyses, based on the 16S rRNA metabarcoding data, supported a richer microbial community in SW, FP2Hrs, FP24Hrs, and FG samples. Furthermore, microbial community structure was determined by sample type, with FG samples appearing more similar to either FP2Hrs or FP24Hrs. These patterns resulted from the higher number of shared ASVs and consequently the contribution of similar major bacterial taxa (e.g., Rhodobacteraceae, Pirellulaceae). These observations support the hypothesis that there are significant ecological and trophic interactions between D. gegenbauri and the ocean microbiome. Predicted gene function recovered many genes related to key processes in the marine environment and supported greater similarity between FP2Hrs, FP24Hrs, and FG samples. These observations suggest that pelagic marine bacteria are utilized by D. gegenbauri to digest captured prey particles, and the subsequent release of fecal pellets supports the rapid proliferation of distinct microbial communities which likely influence key biogeochemical processes in the ocean.

Carbon content, carbon fixation yield and dissolved organic carbon release from diverse marine nitrifiers

Nitrifying microorganisms, including ammonia-oxidizing archaea, ammonia-oxidizing bacteria and nitrite-oxidizing bacteria, are the most abundant chemoautotrophs in the ocean and play an important role in the global carbon cycle by fixing dissolved inorganic carbon (DIC) into biomass. The release of organic compounds by these microbes is less well known but may represent an as-yet unaccounted source of dissolved organic carbon (DOC) available to heterotrophic marine food webs. Here, we provide measurements of cellular carbon and nitrogen quotas, DIC fixation yields and DOC release of ten phylogenetically diverse marine nitrifiers grown in multiple culture conditions. All investigated strains released DOC during growth, making up on average 5-15% of the fixed DIC. Neither substrate concentration nor temperature affected the proportion of fixed DIC released as DOC, but release rates varied between closely related species. Our results also indicate previous studies may have underestimated DIC fixation yields of marine nitrite oxidizers due to partial decoupling of nitrite oxidation from CO2 fixation, and due to lower observed yields in artificial compared to natural seawater medium. The results of this study provide values for biogeochemical models of the global carbon cycle, and help to further constrain the implications of nitrification-fueled chemoautotrophy for marine food-web functioning and the biological sequestration of carbon in the ocean.

Long-Term Performance of Seawater Sea-sand Concrete (SSC) Columns Wrapped with CFRP Strips Under Simulated Marine Environment

This article presents a durability study of carbon fiber-reinforced polymer (CFRP) partially wrapped seawater sea-sand concrete (SSC) columns exposed to natural seawater to explore the effect of exposure duration on the long-term performance of the specimens. Thirty-two cylinders were wrapped with CFRP jackets and exposed to different times of wet-dry cycles (up to 360 days) in an outdoor simulated marine environment. Test results indicate that exposure has no obvious influence on the failure process and ultimate strains of specimens, but the compressive strengths of confined columns (fcc) increase with the increment of exposure time, especially for the partially confined concrete specimens. Moreover, due to the significant variation of unconfined concrete strength fco*), the retentions of fcc and fcc/fco * exhibit an opposite trend. Therefore, the increase of fco* should be considered when using the parameter of the confined-to-unconfined ratio of strength to evaluate the long-term performance of the specimens.

Influence of Organic Matter/Bacteria on the Formation and Transformation of Sulfate Green Rust

The corrosion processes of carbon steel immersed in natural seawater are influenced by microorganisms due to important biological activity. An analysis of the corrosion product layers formed on carbon steel coupons in natural or artificial seawater revealed that sulfate green rust GR(SO42−) was favored in natural environments. In this paper, the role of organic matter/bacteria on the formation and transformation of this compound are addressed. GR(SO42−) was precipitated from Fe(II) and Fe(III) salts in the presence of various marine bacterial species not involved in the redox cycle of Fe or S. Abiotic experiments were performed for comparison, first without any organic species and then with sodium acetate added as a small organic ion. The obtained aqueous suspensions were aged at room temperature for 1 week. The number of bacteria (CFU/mL) was followed over time and the solid phases were characterized by XRD. Whatever the fate of the bacteria (no activity, or activity and growth), the formation of GR(SO42−) was favored and its transformation to magnetite completely inhibited. This effect is attributed to the adsorption of organic molecules on the lateral sides of the GR(SO42−) crystals. A similar effect, though less important, was observed with acetate.

A Multi-Species Investigation of Sponges’ Filtering Activity towards Marine Microalgae

Chronic discharge of surplus organic matter is a typical side effect of fish aquaculture, occasionally leading to coastal eutrophication and excessive phytoplankton growth. Owing to their innate filter-feeding capacity, marine sponges could mitigate environmental impact under integrated multitrophic aquaculture (IMTA) scenarios. Herein, we investigated the clearance capacity of four ubiquitous Mediterranean sponges (Agelas oroides, Axinella cannabina, Chondrosia reniformis and Sarcotragus foetidus) against three microalgal substrates with different size/motility characteristics: the nanophytoplankton Nannochloropsis sp. (~3.2 μm, nonmotile) and Isochrysis sp. (~3.8 μm, motile), as well as the diatom Phaeodactylum tricornutum (~21.7 μm, nonmotile). In vitro cleaning experiments were conducted using sponge explants in 1 L of natural seawater and applying different microalgal cell concentrations under light/dark conditions. The investigated sponges exhibited a wide range of retention efficiencies for the different phytoplankton cells, with the lowest average values found for A. cannabina (37%) and the highest for A. oroides (70%). The latter could filter up to 14.1 mL seawater per hour and gram of sponge wet weight, by retaining 100% of Isochrysis at a density of 105 cells mL−1, under darkness. Our results highlight differences in filtering capacity among sponge species and preferences for microalgal substrates with distinct size and motility traits.

Ocean Alkalinity Enhancement – Avoiding runaway CaCO₃ precipitation during quick and hydrated lime dissolution

Ocean Alkalinity Enhancement (OAE) has been proposed as a method to remove carbon dioxide (CO2) from the atmosphere and to counteract ocean acidification. It involves the dissolution of alkaline minerals such as quick lime, CaO, and hydrated lime, Ca(OH)2. However, a critical knowledge gap exists regarding their dissolution in natural seawater. Particularly, how much can be dissolved before secondary precipitation of calcium carbonate (CaCO3) occurs is yet to be established. Secondary precipitation should be avoided as it reduces the atmospheric CO2 uptake potential of OAE. Here we show that both CaO and Ca(OH)2 powders (> 63 µm of diameter) dissolved in seawater within a few hours. However, CaCO3 precipitation, in the form of aragonite, occurred at a saturation (ΩAr) threshold of about 5. This limit is much lower than what would be expected for typical pseudo-homogeneous precipitation in the presence of colloids and organic materials. Secondary precipitation at unexpectedly low ΩAr was the result of so-called heterogeneous precipitation onto mineral phases, most likely onto CaO and Ca(OH)2 prior to full dissolution. Most importantly, this led to runaway CaCO3 precipitation by which significantly more alkalinity (TA) was removed than initially added, until ΩAr reached levels below 2. Such runaway precipitation would reduce the CO2 uptake efficiency from about 0.8 moles of CO2 per mole of TA down to only 0.1 mole of CO2 per mole of TA. Runaway precipitation appears to be avoidable by dilution below the critical ΩAr threshold of 5, ideally within hours of the addition to minimise initial CaCO3 precipitation. Finally, model considerations suggest that for the same ΩAr threshold, the amount of TA that can be added to seawater would be more than three times higher at 5 °C than at 30 °C, and that equilibration to atmospheric CO2 levels during mineral dissolution would further increase it by a factor of ~6 and ~3 respectively.

Corrosion of steels and irons immersed in natural seawater for up to 600 years

Marine immersion corrosion observations for archaeological and other data, including from shipwrecks, wrought iron anchors and cast iron bridge piers are used to estimate corrosion losses in natural unpolluted coastal and near-coastal seawaters for exposures up to about 600 years. Empirical functions for the development of corrosion loss with time were then developed, standardized to 20˚C mean seawater temperature. The resulting slightly non-linear corrosion loss trend, represented by a modified form of the power law, is consistent with Phase 4 of the previously proposed bi-modal corrosion model. These observations support the notion that the rate of long-term corrosion is controlled by outward diffusion, through the rust layers, of gaseous hydrogen generated by the cathodic hydrogen evolution reaction under predominantly anaerobic corrosion conditions. The power-law trend also provides good extrapolation from shorter- term data. For practical purposes for exposures < 100 years in seawaters with mean temperature around 20˚C, a linear model, with longer-term corrosion rate 0.06 mm/y at 20˚C, is sufficiently accurate.

Aggressiveness of Different Ageing Conditions for Three Thick Marine Epoxy Systems

Three different coated steel systems were aged in natural or artificial seawater, in neutral salt spray (NSS), and using alternate immersion tests in order to evaluate the aggressiveness of the different ageing conditions. Commercial epoxy coatings were applied onto steel (S355NL), hot-galvanized steel (HDG), and Zn-Al15 thermal spraying coated steel. The defect-free systems were immersed in artificial seawater at 35 °C for 1085 days and in natural seawater for 1200 days and were characterized by electrochemical impedance spectroscopy (EIS). Panels with artificial defects were immersed for 180 days in artificial seawater and, regarding adhesion, were evaluated according to ISO 16276-2. In parallel, the three coated systems were submitted to cyclic neutral salt spray (NSS) for 1440 h: defect-free panels were regularly evaluated by EIS, while the degree or corrosion was measured onto panels with artificial defect. After NSS, defect-free panels were immersed in artificial seawater at 35 °C for further EIS investigations. Finally, alternate immersion tests were performed for 860 days for the three defect-free coated systems and for 84 days for panels with a defect. The results showed that, for defect-free panels, immersions in natural or artificial seawater and NSS did not allowed us to distinguish the three different systems that show excellent anticorrosion properties. However, during the alternate immersion test, the organic coating system applied onto HDG presented blisters, showing a greater sensitivity to this test than the two other systems. For panels with a defect, NSS allowed to age the coatings more rapidly than monotone conditions, and the coating system applied onto steel presented the highest degree of corrosion. Meanwhile, the coating systems applied onto HDG and the thermal spray metallic coating showed similar behavior. During the alternate immersion test, the three coated systems with a defect showed clearly different behaviors, therefore it was possible to rank the three systems. Finally, it appeared that the alternate immersion test was the most aggressive condition. It was then proposed that a realistic thermal cycling and an artificial defect are needed when performing ageing tests of thick marine organic coating systems in order to properly rank/evaluate the different systems.

Robust bacterial co-occurence community structures are independent of r- and K-selection history

Selection for bacteria which are K-strategists instead of r-strategists has been shown to improve fish health and survival in aquaculture. We considered an experiment where microcosms were inoculated with natural seawater and the selection regime was switched from K-selection (by continuous feeding) to r-selection (by pulse feeding) and vice versa. We found the networks of significant co-occurrences to contain clusters of taxonomically related bacteria having positive associations. Comparing this with the time dynamics, we found that the clusters most likely were results of similar niche preferences of the involved bacteria. In particular, the distinction between r- or K-strategists was evident. Each selection regime seemed to give rise to a specific pattern, to which the community converges regardless of its prehistory. Furthermore, the results proved robust to parameter choices in the analysis, such as the filtering threshold, level of random noise, replacing absolute abundances with relative abundances, and the choice of similarity measure. Even though our data and approaches cannot directly predict ecological interactions, our approach provides insights on how the selection regime affects the composition of the microbial community, providing a basis for aquaculture experiments targeted at eliminating opportunistic fish pathogens.