experimental ir
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2021 ◽  
Vol 56 (4) ◽  
pp. 255-262
Author(s):  
U Habiba ◽  
A Alam ◽  
S Rahman ◽  
SUD Shamim ◽  
AA Piya

Paracetamol is a very popular medication used to treat pain and fever. IR spectra of paracetamol have been measured for powder crystals. Ab initio calculations of its equilibrium geometry and vibrational spectra were carried out for spectrum interpretation. Differences between the experimental IR spectra of crystalline samples have been analyzed. Variations of molecular structure from the isolated state to molecular crystal were estimated based on the difference between the optimized molecular parameters of free molecules and the experimental bond lengths and angles evaluated for the crystal forms of the title compounds. The role of hydrogen bonds in the structure of molecular crystals of paracetamol is investigated. Bangladesh J. Sci. Ind. Res.56(4), 255-262, 2021


Symmetry ◽  
2021 ◽  
Vol 13 (10) ◽  
pp. 1845
Author(s):  
Ewa Kaczorowska ◽  
Agnieszka Adamczyk-Woźniak ◽  
Grażyna Zofia Żukowska ◽  
Paulina Kostecka ◽  
Andrzej Sporzyński

Benzoxaboroles have emerged over the past decade mainly due to their growing medicinal importance. Regarding the wide application of IR spectroscopy in the pharmaceutical industry, the vibrational properties of over a dozen of benzoxaboroles were described, based on results of DFT calculations as well as IR and Raman spectra measurements. Investigated series of compounds included the currently available antifungal drug (Tavaborole, AN2690) as well as its derivatives. An intense and well-isolated band corresponding to the B-OH group stretching vibrations was present in all experimental IR spectra in the range of 1446–1414 cm−1 and can be considered as characteristic for benzoxaboroles. The vibrational properties of benzoxaboroles are shown to be affected by the formation of intramolecular as well as intermolecular hydrogen bonds, which should also influence the interactions of benzoxaboroles with biomolecules and impact on their biological functions. Docking studies of the benzoxaboroles’ adenosine monophosphate (AMP) spiroboronates into the Candida albicans leucyl-RS synthetase binding pocket showed that the introduction of an amine substituent has a strong influence on their binding. The determined values of inhibition constants manifest high potential of some of the investigated molecules as possible inhibitors of that enzyme.


Molecules ◽  
2021 ◽  
Vol 26 (19) ◽  
pp. 5881
Author(s):  
Riccardo Ferrero ◽  
Stefano Pantaleone ◽  
Massimo Delle Piane ◽  
Fabrizio Caldera ◽  
Marta Corno ◽  
...  

Melatonin (MT) is a molecule of paramount importance in all living organisms, due to its presence in many biological activities, such as circadian (sleep–wake cycle) and seasonal rhythms (reproduction, fattening, molting, etc.). Unfortunately, it suffers from poor solubility and, to be used as a drug, an appropriate transport vehicle has to be developed, in order to optimize its release in the human tissues. As a possible drug-delivery system, β-cyclodextrin (βCD) represents a promising scaffold which can encapsulate the melatonin, releasing when needed. In this work, we present a computational study supported by experimental IR spectra on inclusion MT/βCD complexes. The aim is to provide a robust, accurate and, at the same time, low-cost methodology to investigate these inclusion complexes both with static and dynamic simulations, in order to study the main actors that drive the interactions of melatonin with β-cyclodextrin and, therefore, to understand its release mechanism.


2020 ◽  
Vol 850 ◽  
pp. 138-143
Author(s):  
Guntars Vaivars ◽  
Kristīne Krūkle-Bērziņa ◽  
Madara Markus

SPEEK (sulfonated polyether ether ketone) membranes have been prepared and characterized. The SPEEK membrane geometry and theoretical vibration spectra calculated using density functional theory (DFT) as depending from membrane chain length and polymer cross-linking. Analyzed the limitations of the method by comparing theoretical and experimental IR spectra.


Author(s):  
G. B. Kravchenko ◽  
O. A. Krasilnikova ◽  
M. Mazen

  Introduction. In recent decades, diabetes mellitus type 2 (DM2) has become one of the leading causes of deaths worldwide. A number of studies confirmed the causal relationship between the development of insulin resistance (IR) and DM2. At the same time, traditionally and for many years the plants or substances isolated from them have been using in the DM2 treatment and correction of its complications. The aim of the study – to find out the effect of ethanolic polyphenol Bearberry leaves (Arctostaphylos uva-ursi) extract enriched with arginine (PE50_arg) on tolerance to glucose and lipid metabolism under experimental IR in rats. Research Methods. Adult male outbred albino rats were used in the present study. Two experimental IR models were conducted: daily intraperitoneal administration of dexamethasone and a diet enriched with fructose. Treating was performed by oral administration of polyphenolic alcohol extract (PE50) and the corresponding extract with the addition of arginine (PE50_arg). IR was confirmed by measuring immunoreactive insulin (IRI) and plasma glucose levels. At the end of the experiment, the lipid profile was investigated in the obtained serum samples. The statistical processing of the data was carried out using the STATISTICA program (StatSoftInc., USA, version 6.0). Results and Discussion. A diet for 7 weeks enriched with fructose caused IR in rats. Also we observed increased triacylglycerol (TAG), free fatty acids (FFA) and cholesterol (Ch) levels. Daily injections of dexamethasone, which maintained the hormone level for 5 weeks, led to the IR development. Under hormone-induced IR also FFA and TAG levels were elevated, but Ch concentration in blood plasma did not significantly change. Both extracts, PE50 and PE50_arg, improve cell sensitivity to insulin in experimental IR models. At the same time, PE50_arg has a more pronounced normalizing effect on the lipid parameters being investigated. Conclusions. Our results suggest that PE50_arg may be a potentially promising anti-diabetic agent.


Author(s):  
Vitaly E. Matulis ◽  
Ekaterina G. Ragoyja ◽  
Alexander V. Zuraev ◽  
Yuri V. Grigoriev ◽  
Oleg A. Ivashkevich

The structure of copper(II) poly-5-vinyltetrazolate and the products of its thermolysis has been studied by means of density functional theory and infrared spectroscopy. Copper(II) poly-5-vinyltetrazolate has been obtained and subsequently subjected to thermolysis. Infrared spectra of copper(II) poly-5-vinyltetrazolate and the products of its thermolysis have been recorded. The possible ways of coordination of copper(II) ions with tetrazole-containing ligands were established by analyzing the calculated molecular electrostatic potential distribution and comparing the calculated IR-spectra of the model structures to the experimental ones. It has been shown that the best agreement between the calculated and experimental data is observed for the model with three-coordinated copper(II) ions, which includes both the tetrazole-containing ligands coordinating two copper(II) ions through N(1)- and N(3)-atoms of the tetrazole ring, and the tetrazolecontaining ligands coordinating one copper(II) ion through either the N(2)- or the N(3)-atom. Recently we have shown that the product of thermolysis of copper(II) poly-5-vinyltetrazolate exhibits high catalytic activity in homocoupling of phenylacetylene and Huisgen [3 + 2]-cycloaddition. To establish the structure of the products of thermolysis of copper(II) poly-5-vinyltetrazolate, seven possible products have been proposed based on the analysis of the structure of copper(II) poly-5-vinyltetrazolate and the experimental IR-spectrum. IR-spectra of all proposed products have been calculated and the results of the calculations have been compared with the experimental IR-spectrum of copper(II) poly-5-vinyltetrazolate thermolysis product. It has been shown that the main product of thermolysis is cis-polycyanoacetylene.


2019 ◽  
Vol 18 (06) ◽  
pp. 1950029
Author(s):  
Hanan A. Al-Ghulikah ◽  
Darya Meniailava ◽  
Ulada Vysotskaya ◽  
Anna Matsukovich ◽  
Ali A. El-Emam ◽  
...  

The Fourier transform infrared and Raman spectra of the adamantane-based compound ethyl 4-[3-(adamantan-1-yl)-4-phenyl-5-sulfanylidene-4,5-dihydro-1H-1,2,4-triazol-1-yl]methylpiperazine-1-carboxylate were recorded in the ranges of 3200–650[Formula: see text]cm[Formula: see text] and 3200–150[Formula: see text]cm[Formula: see text], respectively. The UV/Vis spectrum of solution of the title compound in ethanol was measured in the range of 450–200[Formula: see text]nm. The DFT calculations at the B3LYP/cc-pVDZ and B3LYP/cc-pVTZ levels of the theory were performed to obtain the equilibrium geometric structure and to predict vibrational IR and Raman spectra of the title molecule. The TDDFT calculations at the CAM-B3LYP/cc-pVTZ level of the theory, as well as MRPT calculations at the CASSCF(4,5)/XMCQDPT2 level of the theory were carried out to reproduce the electronic absorption spectrum. The experimental IR, Raman and UV/Vis spectra were interpreted on the basis of results of quantum chemical modeling. Based on Mulliken and Löwdin atomic population analysis, it was established that the compound under study exhibits features of an intramolecular charge transfer.


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