Spatial Heterogeneity in Prey Availability, Feeding Success, and Dietary Selectivity for the Threatened Longfin Smelt

Food availability is a key determinant of the nursery value of a given habitat for larval and juvenile fishes. Growth, survival, and recruitment success are often inter-correlated and influenced by prey availability and associated feeding success. This is likely true for the threatened population of Longfin Smelt (Spirinchus thaleichthys) in the San Francisco Estuary (SFE) which has collapsed in recent decades along with its preferred prey. In years with high precipitation and freshwater outflow, larval Longfin Smelt are found in shallow wetland habitats throughout the SFE, but variation in the availability of food and feeding success in these habitats remains unexplored. To examine spatial variation in the trophic value of different rearing habitats, we quantified variation in prey availability, feeding success, and prey selection for larval and juvenile Longfin Smelt captured in restored tidal marshes, sloughs, and open-water habitats in the northern and southern SFE. Prey abundance varied spatially, with densities approximately tenfold greater in southern sloughs and restored tidal ponds relative to northern and open-water habitats. Feeding success of larval Longfin Smelt was positively correlated with both fish length and prey density. Larval Longfin Smelt fed selectively on the copepod Eurytemora affinis, with larger individuals (> 25 mm total length) exhibiting an ontogenetic diet shift to larger mysid shrimps. Our results suggest that wetland habitats across the SFE vary greatly in their trophic value, with previously unexplored habitats exhibiting the highest densities of prey and the highest foraging success for larval Longfin Smelt.

Vegetation and hydrology stratification as proxies to estimate methane emission from tidal marshes

Direct measurement of methane emissions is cost-prohibitive for greenhouse gas offset projects, necessitating the development of alternative accounting methods such as proxies. Salinity is a useful proxy for tidal marsh CH4 emissions when comparing across a wide range of salinity regimes but does not adequately explain variation in brackish and freshwater regimes, where variation in emissions is large. We sought to improve upon the salinity proxy in a marsh complex on Deal Island Peninsula, Maryland, USA by comparing emissions from four strata differing in hydrology and plant community composition. Mean CH4 chamber-collected emissions measured as mg CH4 m−2 h−1 ranked as S. alterniflora (1.2 ± 0.3) ≫ High-elevation J. roemerianus (0.4 ± 0.06) > Low-elevation J. roemerianus (0.3 ± 0.07) = S. patens (0.1 ± 0.01). Sulfate depletion generally reflected the same pattern with significantly greater depletion in the S. alterniflora stratum (61 ± 4%) than in the S. patens stratum (1 ± 9%) with the J. roemerianus strata falling in between. We attribute the high CH4 emissions in the S. alterniflora stratum to sulfate depletion likely driven by limited connectivity to tidal waters. Low CH4 emissions in the S. patens stratum are attributed to lower water levels, higher levels of ferric iron, and shallow rooting depth. Moderate CH4 emissions from the J. roemerianus strata were likely due to plant traits that favor CH4 oxidation over CH4 production. Hydrology and plant community composition have significant potential as proxies to estimate CH4 emissions at the site scale.

Enhancing marsh elevation using sediment augmentation: A case study from southern California, USA

Tidal marshes are an important component of estuaries that provide habitat for fish and wildlife, protection from flooding, recreation opportunities, and can improve water quality. Critical to maintaining these functions is vertical accretion, a key mechanism by which tidal marshes build elevation relative to local sea level. The beneficial use of dredged material to build marsh elevations in response to accelerating sea level rise has gained attention as a management action to prevent habitat loss over the coming decades. In January 2016, a sediment augmentation project using local dredged material was undertaken at Seal Beach National Wildlife Refuge in Anaheim Bay, California, USA, to benefit tidal marsh habitat and the listed species it supports. The application process added 12,900 cubic meters of sediment with an initial, average 22-cm gain in elevation over a 3.2-hectare site. Due to sediment characteristics and higher than anticipated elevations in some areas, vegetation colonization did not occur at the expected rate; therefore, adaptive management measures were undertaken to improve hydrology of the site and facilitate vegetation colonization. More case studies that test and monitor sea level adaptation actions are needed to assist in the planning and implementation of climate-resilient projects to prevent coastal habitat loss over the coming century.

Biogeomorphic modeling to assess resilience of tidal marsh restoration to sea level rise and sediment supply

There is an increasing demand for creation and restoration of tidal marshes around the world, as they provide highly valued ecosystem services. Yet, tidal marshes are strongly vulnerable to factors such as sea level rise and declining sediment supply. How fast the restored ecosystem develops, how resilient it is to sea level rise, and how this can be steered by restoration design, are key questions that are typically challenging to assess. In this paper, we apply a biogeomorphic model to a planned tidal marsh restoration by dike breaching. Our modeling approach integrates tidal hydrodynamics, sediment transport and vegetation dynamics, accounting for relevant fine-scale flow-vegetation interactions (less than 1 m2) and their impact on vegetation and landform development at the landscape scale (several km2) and on the long term (several decades). Our model performance is positively evaluated against observations of vegetation and geomorphic development in adjacent tidal marshes. Model scenarios demonstrate that the restored tidal marsh can keep pace with realistic rates of sea level rise and that its resilience is more sensitive to the availability of suspended sediments than to the rate of sea level rise. We further demonstrate that restoration design options can steer marsh resilience, as it affects the rates and spatial patterns of biogeomorphic development. By varying the width of two dike breaches, which serve as tidal inlets to the restored marsh, we show that a larger difference in the width of the two inlets leads to more diversity in restored habitats. This study showcases that biogeomorphic modeling can support management choices in restoration design to optimize tidal marsh development towards sustainable restoration goals.

Tidal marsh restoration enhances sediment accretion and carbon accumulation in the Stillaguamish River estuary, Washington

Tidal marshes have been recognized globally for their ability to sequester “blue carbon” but there is still a need for studies investigating the marsh response to restoration, particularly in the Pacific Northwest United States. Here we report carbon stocks and accumulation rates for restored and natural tidal marshes in the Stillaguamish River estuary in Puget Sound, Washington, where a 60-hectare marsh was reintroduced to the tidal regime from its previous use as diked and drained farmland. We found that the restoration not only maximized carbon accumulation but also enhanced resilience to rising sea levels. Four years after restoration, mean sediment carbon stocks in the upper 30 cm within the restored marsh (4.43 kg C m-2) were slightly lower than those measured in the adjacent natural marshes (5.95 kg C m-2). Mean carbon accumulation rates, however, were nearly twice as high in the restored marsh (230.49 g C m-2 yr-1) compared to the natural marshes (123.00 g C m-2 yr-1) due to high rates of accretion in the restored marsh (1.57 cm yr-1). Mean elevation change rates were nearly twice that of corresponding 210Pb accretion rates, but all were greater than the current rate of sea level rise.

RGB Indices and Canopy Height Modelling for Mapping Tidal Marsh Biomass from a Small Unmanned Aerial System

Coastal tidal marshes are essential ecosystems for both economic and ecological reasons. They necessitate regular monitoring as the effects of climate change begin to be manifested in changes to marsh vegetation healthiness. Small unmanned aerial systems (sUAS) build upon previously established remote sensing techniques to monitor a variety of vegetation health metrics, including biomass, with improved flexibility and affordability of data acquisition. The goal of this study was to establish the use of RGB-based vegetation indices for mapping and monitoring tidal marsh vegetation (i.e., Spartina alterniflora) biomass. Flights over tidal marsh study sites were conducted using a multi-spectral camera on a quadcopter sUAS near vegetation peak growth. A number of RGB indices were extracted to build a non-linear biomass model. A canopy height model was developed using sUAS-derived digital surface models and LiDAR-derived digital terrain models to assess its contribution to the biomass model. Results found that the distance-based RGB indices outperformed the regular radio-based indices in coastal marshes. The best-performing biomass models used the triangular greenness index (TGI; R2 = 0.39) and excess green index (ExG; R2 = 0.376). The estimated biomass revealed high biomass predictions at the fertilized marsh plots in the Long-Term Research in Environmental Biology (LTREB) project at the study site. The sUAS-extracted canopy height was not statistically significant in biomass estimation but showed similar explanatory power to other studies. Due to the lack of biomass samples in the inner estuary, the proposed biomass model in low marsh does not perform as well as the high marsh that is close to shore and accessible for biomass sampling. Further research of low marsh is required to better understand the best conditions for S. alterniflora biomass estimation using sUAS as an on-demand, personal remote sensing tool.