A Combined EPMA and LA-ICP-MS Investigation on Bi-Cu-Au Mineralization from the Kizhnica Ore Field (Vardar Zone, Kosovo)

This paper describes a newly discovered Bi-Cu ± Au mineralization co-occurring with Pb-Zn-Ag hydrothermal mineralization within the Kizhnica-Hajvalia-Badovc ore field, central Kosovo, Vardar Zone. The mineralogy of two styles of Bi-Cu ± Au mineralization was described using EPMA in combination with reflected and transmitted light microscopy. Hydrothermal Cu-Bi veinlets in the Kizhnica andesite quarry consist of Bi sulfosalts (bismuthinite, cosalite, aikinite, and krupkaite), pyrite, hematite, chalcopyrite, galena, sphalerite, and tetrahedrite group minerals. Disseminated Bi-Au-Cu-Te mineralization from the contact type of mineralization (hornfels) consists of Bi sulfosalts (cannizzarite, bismuthinite, galenobismutite, cosalite), associated with sulfarsenides (arsenopyrite, gersdorffite, and cobaltite), base metal sulfides (chalcopyrite, pyrite, sphalerite, pyrrhotite, and galena), native gold, native bismuth, and tetradymite. LA-ICP-MS analyses of sphalerite, chalcopyrite, and tetrahedrite indicate increased content of In and Sn in the Kizhnica Bi-Cu-Au mineralizing system, while LA-ICP-MS analyses in pyrites show the presence of many elements, e.g., Au, As, Co, Sb, Tl, Hg, Pb, Bi related to the structure of pyrite or controlled by nano-inclusions. The results suggest a connection between Bi-Cu±Au mineralization and the proximity to intrusive rocks, which may be helpful for Au exploration in Kosovo.

celldeath: A tool for detection of cell death in transmitted light microscopy images by deep learning-based visual recognition

Cell death experiments are routinely done in many labs around the world, these experiments are the backbone of many assays for drug development. Cell death detection is usually performed in many ways, and requires time and reagents. However, cell death is preceded by slight morphological changes in cell shape and texture. In this paper, we trained a neural network to classify cells undergoing cell death. We found that the network was able to highly predict cell death after one hour of exposure to camptothecin. Moreover, this prediction largely outperforms human ability. Finally, we provide a simple python tool that can broadly be used to detect cell death.

Archaeosporites rhyniensis gen. et sp. nov. (Glomeromycota, Archaeosporaceae) from the Lower Devonian Rhynie chert: a fungal lineage morphologically unchanged for more than 400 million years

Background and Aims Structurally preserved arbuscular mycorrhizas from the Lower Devonian Rhynie chert represent core fossil evidence of the evolutionary history of mycorrhizal systems. Moreover, Rhynie chert fossils of glomeromycotan propagules suggest that this lineage of arbuscular fungi was morphologically diverse by the Early Devonian; however, only a small fraction of this diversity has been formally described and critically evaluated. Methods Thin sections, previously prepared by grinding wafers of chert from the Rhynie beds, were studied by transmitted light microscopy. Fossils corresponding to the description of Archaeospora spp. occurred in 29 slides, and were measured, photographed and compared with modern-day species in that genus. Key Results Sessile propagules <85 µm in diameter, some still attached to a sporiferous saccule, were found in early land plant axes and the chert matrix; they developed, in a similar manner to extant Archaeospora, laterally or centrally within the saccule neck. Microscopic examination and comparison with extant fungi showed that, morphologically, the fossils share the characters used to circumscribe the genus Archaeospora (Glomeromycota; Archaeosporales; Archaeosporaceae). Conclusions The fossils can be assigned with confidence to the extant family Archaeosporaceae, but because molecular analysis is necessary to place organisms in these taxa to present-day genera and species, they are placed in a newly proposed fossil taxon, Archaeosporites rhyniensis.

Petrography of aggregates in Luzon, Philippines: Identification of components and deleterious materials

Petrography is one of a series of standard tests used to assess an aggregate’s components, mechanical qualities, durability, chemical stability, and alkali reactivity. In this study, aggregate materials were collected from rock exposures and/or alluvial deposits from four areas near Metro Manila, Philippines: Bulacan, Rizal, Pampanga, and Zambales. Transmitted light microscopy was conducted to identify rock types and characterise physical and chemical properties that may present potential problems when used as aggregate materials. The results show that the aggregates vary in terms of rock types and alteration type. Samples from Bulacan are mostly porphyritic basalt and fine to coarse-grained sandstone with veinlets of silica and carbonate. The presence of cavities and microfractures caused mainly by vesicles from the volcanic rocks was also observed. Rizal aggregates are composed predominantly of chloritized basalts and andesites with minor clastic rocks and tuffs. The aggregates from Zambales are products of erosion of the Zambales Ophiolite, mixed with the lahar deposits from the Pinatubo eruption. On the other hand, Pampanga aggregates are mostly lahar deposits, containing pumice, a poor choice for aggregate composition due to its low hardness, brittleness and vesiculated texture. Aside from the lithological classification, potentially alkali-reactive constituents were also observed in selected samples from the four sampling areas.

celldeath: a tool for simple detection of cell death in transmitted light microscopy images by visual deep learning analysis

SummaryCell death experiments are routinely done in many labs around the world, these experiments are the backbone of many assays for drug development. Cell death detection is usually performed in many ways, and requires time and reagents. However, cell death is preceded by slight morphological changes in cell shape and texture. In this paper, we train a neural network to classify cells undergoing cell death. We found that the network was able to highly predict cell death after one hour of exposure to CPT. Moreover, this prediction largely outperforms human ability. Finally, we provide a simple python tool that can be used to detect cell death.

AI-powered transmitted light microscopy for functional analysis of live cells

Transmitted light microscopy can readily visualize the morphology of living cells. Here, we introduce artificial-intelligence-powered transmitted light microscopy (AIM) for subcellular structure identification and labeling-free functional analysis of live cells. AIM provides accurate images of subcellular organelles; allows identification of cellular and functional characteristics (cell type, viability, and maturation stage); and facilitates live cell tracking and multimodality analysis of immune cells in their native form without labeling.

Mineralogy of Cobalt-Rich Ferromanganese Crusts from the Perth Abyssal Plain (E Indian Ocean)

Mineralogy of phosphatized and zeolitized hydrogenous cobalt-rich ferromanganese crusts from Dirck Hartog Ridge (DHR), the Perth Abyssal Plain (PAP), formed on an altered basaltic substrate, is described. Detail studies of crusts were conducted using optical transmitted light microscopy, X-ray Powder Diffraction (XRD) and Energy Dispersive X-ray Fluorescence (EDXRF), Differential Thermal Analysis (DTA) and Electron Probe Microanalysis (EPMA). The major Fe-Mn mineral phases that form DHR crusts are low-crystalline vernadite, asbolane and a feroxyhyte-ferrihydrite mixture. Accessory minerals are Ca-hydroxyapatite, zeolites (Na-phillipsite, chabazite, heulandite-clinoptilolite), glauconite and several clay minerals (Fe-smectite, nontronite, celadonite) are identified in the basalt-crust border zone. The highest Ni, Cu and Co contents are observed in asbolane and Mn-(Fe) vernadite. There is significant enrichment of Ti in feroxyhyte−ferrihydrite and vernadite. The highest rare earth element (REE) content is measured in the phosphate minerals, less in phyllosilicates and Na-phillipsite. The geochemical composition of minerals in the DHR crusts supports the formation of crusts by initial alteration, phosphatization and zeolitization of the substrate basalts followed by oscillatory Fe-Mn oxyhydroxides precipitation of hydrogenous vernadite (oxic conditions) and diagenous asbolane (suboxic conditions).