incubation experiments
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Diversity ◽  
2022 ◽  
Vol 14 (1) ◽  
pp. 49
Author(s):  
Pei-Chi Ho ◽  
Gwo-Ching Gong ◽  
Vladimir Mukhanov ◽  
Zhi-Yu Zhu ◽  
An-Yi Tsai

Seasonal variations in the picophytoplankton community structure (Synechococcus spp. and picoeukaryotes) were studied by flow cytometry in the coastal ecosystem of the subtropical western Pacific from October 2019 to September 2020. Synechococcus spp. was dominant in abundance during the study period, with its density ranging from 0.05 to 5.6 × 104 cells mL−1; its maximum occurred in July 2020. Picoeukaryotes were less abundant, with their density ranging from 0.2 to 13.6 × 103 cells mL−1. Their highest abundance was recorded in January 2020. The growth rates of Synechococcus spp. and picoeukaryotes ranged from −0.39 to 1.42 d−1 and 0.38 to 2.46 d−1, respectively, throughout the study period. Overall, the growth rate of the picoeukaryotes was significantly higher than that of Synechococcus spp. It is interesting to note that the grazing mortality of Synechococcus spp. and picoeukaryotes during the warmer period (April to September) was relatively low. Based on this study, we suggest that mixotrophic nanoflagellates lowered their feeding activity that obtained nutrients from prey and instead used additional nutrients during the incubation experiments. Our study demonstrated that a shift in the picophytoplankton community composition and grazing activity of predacious nanoflagellates in cold and warm periods can impact on the seasonal dynamics of the microbial food web.


2022 ◽  
Author(s):  
Sachi Umezawa ◽  
Manami Tozawa ◽  
Yuichi Nosaka ◽  
Daiki Nomura ◽  
Hiroji Onishi ◽  
...  

Abstract. We conducted time-series observations in Funka Bay, Hokkaido, Japan, from 15 February to 14 April 2019. The diatom spring bloom peaked on 4 March and started declining on 15 March. Funka Bay winter water remained below 30-m depth, which was below the surface mixed-layer and dark-zone depths on both dates. At depths of 30–50 m, concentrations of NO3–, PO43–, and Si(OH)4 decreased by half between these dates even in darkness. Incubation experiments using the diatom Thalassiosira nordenskioeldii showed that this diatom could consume nutrients in darkness at substantial rates. We conclude that the nutrient reduction in the subsurface layer (30–50 m) could be explained by dark consumption by diatoms that had been growing in the surface waters and then sank to the subsurface layer. We believe that this is the first study to present observational evidence for the consumption of the main nutrients by diatoms in the dark subsurface layer during the spring bloom. Nutrient consumption in this layer might have a substantial influence on the primary production during and after the spring bloom.


Author(s):  
Ji Li ◽  
Kevin Sellner ◽  
Allen Place ◽  
Jeffrey Cornwell ◽  
Yonghui Gao

Cyanobacterial blooms can be stimulated by excessive phosphorus (P) input, especially when diazotrophs are the dominant species. A series of mesocosm experiments were conducted in a lake dominated by a cyanobacteria bloom to study the effects of Phoslock®, a phosphorus adsorbent. The results showed that the addition of Phoslock® lowered the soluble reactive phosphate (SRP) concentrations in water due to efficient adsorption and mitigated the blooms. Once settled on the sediments, Phoslock® serves as a barrier to reduce P diffusion from sediments into the overlying waters. In short-term (1 day) incubation experiments, Phoslock® diminished or reversed SRP effluxes from bottom sediments. At the same time, the upward movement of the oxic–anoxic interface through the sediment column slightly enhanced NH4+ release and depressed N2 release, suggesting the inhibition of nitrification and denitrification. In a long-term (28 days) experiment, Phoslock® hindered the P release, reduced the cyanobacterial abundance, and alleviated the bloom-driven enhancements in the pH and oxygen. These results suggest that, through suppression of internal nutrient effluxes, Phoslock® can be used as an effective control technology to reduce cyanobacteria blooms common to many freshwater systems.


Agronomy ◽  
2021 ◽  
Vol 11 (12) ◽  
pp. 2474
Author(s):  
Arthur Gross ◽  
Tobias Bromm ◽  
Bruno Glaser

Biochar application to soil has the potential to sequester carbon in the long term because of its high stability and large-scale production potential. However, biochar technologies are still relatively new, and the global factors affecting the long-term fate of biochar in the environment are still poorly understood. To fill this important research gap, a global meta-analysis was conducted including 64 studies with 736 individual treatments. Field experiments covered experimental durations between 1 and 10 years with biochar application amounts between 1 and 100 Mg ha−1. They showed a mean increase in soil organic carbon (SOC) stocks by 13.0 Mg ha−1 on average, corresponding to 29%. Pot and incubation experiments ranged between 1 and 1278 days and biochar amounts between 5 g kg−1 and 200 g kg−1. They raised SOC by 6.3 g kg−1 on average, corresponding to 75%. More SOC was accumulated in long experimental durations of >500 days in pot and incubation experiments and 6–10 years in field experiments than in shorter experimental durations. Organic fertilizer co-applications significantly further increased SOC. Biochar from plant material showed higher C sequestration potential than biochar from fecal matter, due to higher C/N ratio. SOC increases after biochar application were higher in medium to fine grain textured soils than in soils with coarse grain sizes. Our study clearly demonstrated the high C sequestration potential of biochar application to agricultural soils of varying site and soil characteristics.


Molecules ◽  
2021 ◽  
Vol 26 (22) ◽  
pp. 6916
Author(s):  
Gert Steurs ◽  
Nico Moons ◽  
Luc Van Meervelt ◽  
Boudewijn Meesschaert ◽  
Wim Michel De Borggraeve

Steviol glycosides were subjected to bacteria present in a soil sample collected from a Stevia plantation in Paraguay. During the incubation experiments, next to the aglycon steviol, steviol degradation products were also formed. X-ray analysis and NMR methods in combination with chemical synthesis and GIAO NMR calculations were used to fully characterize the structure of these compounds as a tricyclic ketone and the corresponding reduced form. They were nicknamed monicanone and monicanol. The latter has the (S)-configuration at the alcohol site.


2021 ◽  
Vol 14 (10) ◽  
pp. 6605-6622
Author(s):  
John Zobitz ◽  
Heidi Aaltonen ◽  
Xuan Zhou ◽  
Frank Berninger ◽  
Jukka Pumpanen ◽  
...  

Abstract. Forest fires modify soil organic carbon and suppress soil respiration for many decades after the initial disturbance. The associated changes in soil autotrophic and heterotrophic respiration from the time of the forest fire, however, are less well characterized. The FireResp model predicts soil autotrophic and heterotrophic respiration parameterized with a novel dataset across a fire chronosequence in the Yukon and Northwest Territories of Canada. The dataset consisted of soil incubation experiments and field measurements of soil respiration and soil carbon stocks. The FireResp model contains submodels that consider a Q10 (exponential) model of respiration compared to models of heterotrophic respiration using Michaelis–Menten kinetics parameterized with soil microbial carbon. For model evaluation we applied the Akaike information criterion and compared predicted patterns in components of soil respiration across the chronosequence. Parameters estimated with data from the 5 cm soil depth had better model–data comparisons than parameters estimated with data from the 10 cm soil depth. The model–data fit was improved by including parameters estimated from soil incubation experiments. Models that incorporated microbial carbon with Michaelis–Menten kinetics reproduced patterns in autotrophic and heterotrophic soil respiration components across the chronosequence. Autotrophic respiration was associated with aboveground tree biomass at more recently burned sites, but this association was less robust at older sites in the chronosequence. Our results provide support for more structured soil respiration models than standard Q10 exponential models.


2021 ◽  
Author(s):  
Jianwei Li ◽  
Siyang Jian ◽  
Gangsheng Wang ◽  
Laurel Kluber ◽  
Christopher Schadt ◽  
...  

Water ◽  
2021 ◽  
Vol 13 (19) ◽  
pp. 2686
Author(s):  
An-Yi Tsai ◽  
Vladimir Mukhanov

As important bacterivores in planktonic food webs, mixotrophic nanoflagellates cancause mortality in marine Synechococcus spp. Our previous study found that the pigmented nanoflagellate (PNF) has a significant grazing impact on Synechococcus spp. In the current study, we applied the dilution approach to test the growth and grazing rates of nanoflagellates on Synechococcus spp. We then compared the differences between experimental nutrient additions and in situ conditions in the coastal waters of the East China Sea during the summer season from July to September. The growth rates of Synechococcus spp. in the ambient environment were between 0.54 and 0.62 day−1, which were slightly higher than the 0.56 and 0.66 day−1 with nutrient enrichment in summer. In contrast, our nutrient enrichment experiments produced a marked decline approximately from 21% to 58%in the nanoflagellate grazing rate on Synechococcus spp. The reason was that the mixotrophic PNFs directly used the added nutrients and reduced their supply of nutrients from prey during the incubation experiments.


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