target probe
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2022 ◽  
pp. 1-22
Author(s):  
Yong Zhang ◽  
Min Xie ◽  
Youguo Chen ◽  
Rongmin Xiong ◽  
Change Yue ◽  
...  

Abstract The joint effects of stimulus quality and semantic context in visual word recognition were examined with event-related potential (ERP) recordings. In one-character Chinese word recognition, we manipulated stimulus quality at two degradation levels (highly vs. slightly degraded) and semantic context at two priming levels (semantically related vs. unrelated). In a prime–target–probe trial flow, ERPs were recorded to the target character which was presented in either high or slight degradation and which was preceded by either a semantically related or unrelated prime character. The target character was then followed by a probe character which was either identical to or different from the target character. Subjects were instructed to make target–probe matching judgments. The ERP results demonstrated a degradation by priming interaction, with larger N400 semantic priming effects for slightly degraded targets. Moreover, the degradation effects were observed on the P200, N250, and N400. These findings provided evidence for the cascaded model of visual word recognition such that the visual processing cascaded into the semantic stage and thus interacted on the N400 amplitude. The results were compared to an earlier study with a null ERP degradation by priming interaction. The ramifications of these results for models of visual word recognition are discussed.


2020 ◽  
Vol 6 (1) ◽  
Author(s):  
Ming Gong ◽  
Feihu Xu ◽  
Zheng-Da Li ◽  
Zizhu Wang ◽  
Yu-Zhe Zhang ◽  
...  

AbstractQuantum resetting protocols allow a quantum system to be sent to a state in the past by making it interact with quantum probes when neither the free evolution of the system nor the interaction is controlled. We experimentally verify the simplest non-trivial case of a quantum resetting protocol, known as the $${{\mathcal{W}}}_{4}$$ W 4 protocol, with five superconducting qubits, testing it with different types of free evolutions and target–probe interactions. After projection, we obtained a reset state fidelity as high as 0.951, and the process fidelity was found to be 0.792. We also implemented 100 randomly chosen interactions and demonstrated an average success probability of 0.323 for $$\left|1\right\rangle$$ 1 and 0.292 for $$\left|-\right\rangle$$ − , and experimentally confirmed the nonzero probability of success for unknown interactions; the numerical simulated values are about 0.3. Our experiment shows that the simplest quantum resetting protocol can be implemented with current technologies, making such protocols a valuable tool in the eternal fight against unwanted evolution in quantum systems.


2020 ◽  
Vol 18 (1) ◽  
Author(s):  
Huiyan Tian ◽  
Changjing Yuan ◽  
Yu Liu ◽  
Zhi Li ◽  
Ke Xia ◽  
...  

Abstract MiRNA-150, a gene regulator that has been revealed to be abnormal expression in non-small cell lung cancer (NSCLC), can be regarded as a serum indicator for diagnosis and monitoring of NSCLC. Herein, a new sort of nanoprobe, termed allosteric spherical nanoprobe, was first developed to sense miRNA-150. Compared with conventional hairpin, this new nanoprobe possesses more enrichment capacity and reaction cross section. Structurally, it consists of magnetic nanoparticles and dual-hairpin. In the absence of miRNA-150, the spherical nanoprobes form hairpin structure through DNA self-assembly, which could promote the Förster resonance energy transfer (FRET) of fluorophore (FAM) and quencher (BHQ1) nearby. However, in the presence of target, the target-probe hybridization can open the hairpin and form the active “Y” structure which separated fluorophore and quencher to yield “signal on” fluorescence. In the manner of multipoint fluorescence detection, the target-bound allosteric spherical nanoprobe could provide high detection sensitivity with a linear range of 100 fM to 10 nM and a detection limit of 38 fM. More importantly, the proposed method can distinguish the expression of serum miRNA-150 among NSCLC patients and healthy people. Finally, we hoped that the potential bioanalytical application of this nanoprobe strategy will pave the way for point-of-care testing (POCT).


2020 ◽  
Author(s):  
Huiyan Tian ◽  
Changjing Yuan ◽  
Yu Liu ◽  
Zhi Li ◽  
Ke Xia ◽  
...  

Abstract MiRNA-150, a gene regulator that has been revealed to be abnormal expression in non-small cell lung cancer ( NSCLC ), can be regarded as a serum indicator for diagnosis and monitoring of NSCLC . Herein, a new sort of nanoprobe, termed allosteric spherical nanoprobe, was first developed to sense miRNA-150. Compared with conventional hairpin, this new nanoprobe possesses more enrichment capacity and reaction cross section. Structurally, it consists of magnetic nanoparticles and dual-hairpin. In the absence of miRNA-150, the spherical nanoprobes form hairpin structure through DNA self-assembly, which could promote the Förster resonance energy transfer (FRET) of fluorophore (FAM) and quencher (BHQ1) nearby. However, in the presence of target, the target-probe hybridization can open the hairpin and form the active “Y” structure which separated fluorophore and quencher to yield a “signal on” fluorescence. In the manner of multipoint fluorescence detection , the target-bound allosteric spherical nanoprobe could provide a high detection sensitivity with a linear range of 100 fM to 10 nM and a detection limit of 38 fM. More importantly, the proposed method could distinguish the expression of serum miRNA-150 among NSCLC patients and healthy people. Finally, we hoped that the potential bioanalytical application of this nanoprobe strategy will pave the way for point-of-care testing (POCT).


2020 ◽  
Author(s):  
Huiyan Tian ◽  
Changjing Yuan ◽  
Yu Liu ◽  
Ke Xia ◽  
Mengya Li ◽  
...  

Abstract MiRNA-150, a gene regulator that has been revealed to be abnormal expression in non-small cell lung cancer (NSCLC), can be regarded as a serum indicator for diagnosis and monitoring of NSCLC. Herein, a new sort of nanoprobe, termed allosteric spherical nanoprobe, was first developed to sense miRNA-150. Compared with conventional hairpin, this new nanoprobe possesses more enrichment capacity and reaction cross section. Structurally, it consists of magnetic nanoparticles and dual-hairpin. In the absence of miRNA-150, the spherical nanoprobes form hairpin structure through DNA self-assembly, which could promote the Förster resonance energy transfer (FRET) of fluorophore (FAM) and quencher (BHQ1) nearby. However, in the presence of target, the target-probe hybridization can open the hairpin and form the active “Y” structure which separated fluorophore and quencher to yield a “signal on” fluorescence. In the manner of multipoint fluorescence detection, the target-bound allosteric spherical nanoprobe could provide a high detection sensitivity with a linear range of 100 fM to 10 nM and a detection limit of 38 fM. More importantly, the proposed method can distinguish the expression of serum miRNA-150 among NSCLC patients and healthy people. Finally, we hoped that the potential bioanalytical application of this nanoprobe strategy will pave the way for point-of-care testing (POCT).


Sensors ◽  
2020 ◽  
Vol 20 (14) ◽  
pp. 3873 ◽  
Author(s):  
Maria Smith ◽  
Kenneth Smith ◽  
Alan Olstein ◽  
Andrew Oleinikov ◽  
Andrey Ghindilis

Application of restriction endonuclease (REase) enzymes for specific detection of nucleic acids provides for high assay specificity, convenience and low cost. A direct restriction assay format is based on the specific enzymatic cleavage of a target–probe hybrid that is accompanied with the release of a molecular marker into the solution, enabling target quantification. This format has the detection limit in nanomolar range. The assay sensitivity is improved drastically to the attomolar level by implementation of exponential signal amplification that is based on a cascade of self-perpetuating restriction endonuclease reactions. The cascade is started by action of an amplification “trigger”. The trigger is immobilized through a target-specific probe. Upon the target probe hybridization followed with specific cleavage, the trigger is released into the reaction solution. The solution is then added to the assay amplification stage, and the free trigger induces cleavage of amplification probes, thus starting the self-perpetuating cascade of REase-catalyzed events. Continuous cleavage of new amplification probes leads to the exponential release of new triggers and rapid exponential signal amplification. The proposed formats exemplify a valid isothermal alternative to qPCR with similar sensitivity achieved at a fraction of the associated costs, time and labor. Advantages and challenges of the approach are discussed.


i-Perception ◽  
2020 ◽  
Vol 11 (4) ◽  
pp. 204166952093330
Author(s):  
Jiahan Hui ◽  
Yue Wang ◽  
Peng Zhang ◽  
Peter U. Tse ◽  
Patrick Cavanagh

When a Gabor moves in one direction in the visual periphery while its internal texture moves in the orthogonal direction, its perceived direction can deviate from its physical direction by as much as 45° or more. Lisi et al. showed that immediate saccades go to the physical location of double-drift targets, whereas delayed saccades primarily go to their perceived locations. Here, we investigated whether the apparent motion seen from the offset of a double-drift stimulus to the onset of a later target probe originates from the perceived or physical location of the double-drift stimulus. We find that apparent motion proceeds away from the perceived position of the double-drift stimulus at all temporal delays. This suggests that apparent motion is computed in perceptual rather than retinotopic coordinates.


Coatings ◽  
2020 ◽  
Vol 10 (4) ◽  
pp. 420 ◽  
Author(s):  
Florentin R. Nitu ◽  
Jorge S. Burns ◽  
Mariana Ionită

As graphene oxide-based oligonucleotide biosensors improve, there is a growing need to explore their ability to retain high sensitivity for low target concentrations in the context of biological fluids. Therefore, we innovatively combined assay milieu factors that could influence the key performance parameters of DNA hybridization and graphene oxide (GO) colloid dispersion, verifying their suitability to enhance oligonucleotide–GO interactions and biosensor performance. As a model system, we tested single-strand (ss) DNA detection in a complex solution containing bovine serum albumin (BSA) and salts with surfactants. A fluorescein conjugated 30-mer oligonucleotide ssDNA probe was combined with its complementary cDNA target, together with solute dispersed GO and either non-ionic (Triton X-100 and Tween-20) or anionic sodium dodecyl sulfate (SDS) surfactants. In this context, we compared the effect of divalent Mg2+ or monovalent Na+ salts on GO binding for the quench-based detection of specific target–probe DNA hybridization. GO biosensor strategies for quench-based DNA detection include a “turn on” enhancement of fluorescence upon target–probe interaction versus a “turn off” decreased fluorescence for the GO-bound probe. We found that the sensitive and specific detection of low concentrations of oligonucleotide target was best achieved using a strategy that involved target–probe DNA hybridization in the solution with a subsequent modified “turn-off” GO capture and the quenching of the unhybridized probe. Using carefully formulated assay procedures that prevented GO aggregation, the preferential binding and quenching of the unhybridized probe were both achieved using 0.1% BSA, 0.065% SDS and 6 mM NaCl. This resulted in the sensitive measurement of the specific target–probe complexes remaining in the solution. The fluorescein-conjugated single stranded probe (FAM–ssDNA) exhibited linearity to cDNA hybridization with concentrations in the range of 1–8 nM, with a limit of detection equivalent to 0.1 pmoles of target in 100 µL of assay mix. We highlight a general approach that may be adopted for oligonucleotide target detection within complex solutions.


2020 ◽  
Vol 1 (1) ◽  
Author(s):  
Kieran S Mohr ◽  
Niamh Carr ◽  
Rachel Georgel ◽  
Simon P Kelly

Abstract Spatial attention modulations of initial afferent activity in area V1, indexed by the first component “C1” of the human visual evoked potential, are rarely found. It has thus been suggested that early modulation is induced only by special task conditions, but what these conditions are remains unknown. Recent failed replications—findings of no C1 modulation using a certain task that had previously produced robust modulations—present a strong basis for examining this question. We ran 3 experiments, the first to more exactly replicate the stimulus and behavioral conditions of the original task, and the second and third to manipulate 2 key factors that differed in the failed replication studies: the provision of informative performance feedback, and the degree to which the probed stimulus features matched those facilitating target perception. Although there was an overall significant C1 modulation of 11%, individually, only experiments 1 and 2 showed reliable effects, underlining that the modulations do occur but not consistently. Better feedback induced greater P1, but not C1, modulations. Target-probe feature matching had an inconsistent influence on modulation patterns, with behavioral performance differences and signal-overlap analyses suggesting interference from extrastriate modulations as a potential cause.


2020 ◽  
Vol 22 (11) ◽  
pp. 6210-6221
Author(s):  
Konoya Das ◽  
Subrahmanyam Sappati ◽  
Partha Hazra

The hydrogen bonding abilities of the LLC water molecules and their effects on intramolecular hydrogen bonds of the target probe molecules.


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