Reverse-Zoonotic Transmission of SARS-CoV-2 Lineage Alpha (B.1.1.7) to Great Apes and Exotic Felids in a Zoo in the Czech Republic

We report an outbreak of SARS-CoV-2 lineage alpha in gorillas and felid species in a zoo in Prague, Czech Republic. The course of illness and clinical signs are described, and the particular SARS-CoV-2 variants are characterized by next generation sequencing and phylogenetic analysis. The putative transmission routes are also inferred.

New Geometric Morphometric Insights in Digital Taphonomy: Analyses into the Sexual Dimorphism of Felids through Their Tooth Pits

Recent studies using geometric morphometrics for taphonomy have yielded interesting results, opening new horizons of research in both archaeological and paleontological sites. Here we present the analysis of tooth pits left by male and female individuals of two different carnivore species (Panthera tigris and Panthera pardus) in order to see if sexual dimorphism influences the morphology of tooth pit marks. In the process, 3D-scanning and applied statistics were used. Based on samples derived from two individuals of different sexes, the present results indicate sexual dimorphism in these felid species to not be a conditioning factor of tooth pit morphology.

Modeling The Effect of Forest Fire and Deforestation on Mid-Sized Wild Cat (Felids) Occupancy in SE Asian Tropical Rainforest

Felids are mammal groups that also experiencing the effects of forest fire and deforestation rate. By using camera detection method, two felid species, Prionailurus bengalensis and Pardofelis marmorata, of tropical rainforests in SE Asia have been studied. The studied area was a rainforest in Sumatra that has experienced several forest fires with annual deforestation rates of 1.69%-2.89%. Occupancy model using Akaike Information Criterion (AIC) is in agreement that deforestation rate is the best explanatory covariate explaining the declining occupancy of those felid species. P. marmorata was known more sensitive to the both deforestation rate and forest fire frequency covariate effects since it has similar AIC values. While P. bengalensis was slightly affected by forest fires. Values of Area Under The Curve (AUC) of Receiver Operating Characteristic (ROC) were >0.5 and these indicate adequate probability of forest fire effects on felid occupancy. Cut off value of occupancy of P. bengalensis was higher than P. marmorata. For P. bengalensis, the cut off value was 1.75 leading to a sensitivity and specificity of 62%. This is the threshold value for the prediction of numbers of P. bengalensis individual occurred where both sensitivity and specificity are maximized and as an effect of forest fire, and this can be used to classify areas as occupied by P. bengalensis.

Updating records of a threatened felid species of the Argentinian Patagonia: the Guigna Leopardus guigna (Molina, 1782) (Mammalia: Carnivora: Felidae) in Los Alerces National Park

The Guigna Leopardus guigna is an endemic felid of the Valdivian Temperate Forests in Argentina and Chile, and of the Chilean Matorral ecoregion. It is a small-sized felid (1.6–2.5 kg), one of the least known wild felids, and categorized as Vulnerable to extinction. Here, we present two new reliable records in Los Alerces National Park, Chubut Province, Argentina, the southernmost protected area, in which the species is present. The first record is an individual found dead on 6 June 2019 on the bank of Frey River near Amutui Quimei Lake. The second record was an individual casually captured in an American Mink Neovison vison cage on 7 December 2019 near Menéndez Lake. Both records were in forested Nothofagus sites very nearby to watercourses. In order to maintain viable long-term Guigna populations, corridors between protected areas should be established, particularly in habitat dominated by human presence and activities. We strongly recommend further fieldwork in protected areas and between them to increase the knowledge about the distribution, habitat use, and ecology of the Guigna.

Taxonomic Distribution of Neoplasia among Non-Domestic Felid Species under Managed Care

As evidenced by numerous case reports from zoos, neoplasia in felids is common, but most reports are limited to Panthera species in North America or Europe. In order to obtain a wider epidemiologic understanding of neoplasia distribution, necropsy records at seven facilities (USA, Mexico, Colombia, Peru, and Brazil) were evaluated. In contrast to others, this study population (195 cases, 16 species), included many non-Panthera felids. Overall neoplasia prevalence was 28.2% (55/195). Panthera species had a higher prevalence of neoplasia than non-Panthera species (52.5%; vs. 13.0%). Lions (66.7%), jaguars (55.0%), and tigers (31.3%) had the highest species-specific prevalence of neoplasia. Neoplasms in Panthera species were more frequently malignant than in non-Panthera (86.1% vs. 55.6%). The systems most commonly affected were the reproductive, hematolymphoid, and respiratory. The range of management conditions and more varied genetic backgrounds support a robust taxonomic pattern and suggest that the reported propensity for neoplasia in jaguars may have a genetic basis at a taxonomic level higher than species, as lions and tigers also have high prevalence. Given the high prevalence of neoplasia and high likelihood of malignancy, routine medical exams in all nondomestic felids, but Panthera species in particular, should include thorough assessments of any clinical signs of neoplasia.

The timing of breeding and independence for snow leopard females and their cubs

Significant knowledge gaps persist on snow leopard demography and reproductive behavior. From a GPS-collared population in Mongolia, we estimated the timing of mating, parturition and independence. Based on three mother–cub pairs, we describe the separation phase of the cub from its mother as it gains independence. Snow leopards mated from January–March and gave birth from April–June. Cubs remained with their mother until their second winter (20–22 months of age) when cubs started showing movements away from their mother for days at a time. This initiation of independence appeared to coincide with their mother mating with the territorial male. Two female cubs remained in their mothers’ territory for several months after initial separation, whereas the male cub quickly dispersed. By comparing the relationship between body size and age of independence across 11 solitary, medium-to-large felid species, it was clear that snow leopards have a delayed timing of separation compared to other species. We suggest this may be related to their mating behavior and the difficulty of the habitat and prey capture for juvenile snow leopards. Our results, while limited, provide empirical estimates for understanding snow leopard ecology and for parameterizing population models.

Diet, prey selection, and activity of Asian golden cats and leopard cats in northern Laos

The Asian golden cat (Catopuma temminckii) occurs in small, declining, and highly fragmented populations throughout Southeast Asia, whereas the smaller leopard cat (Prionailurus bengalensis) is common and widespread. In contrast to leopard cats, little is known about the ecology of Asian golden cats, and resource partitioning between these species has not been studied. We used DNA-confirmed scats, camera-trap data, and prey surveys, to determine the diet, prey selection, and activity, of Asian golden cats and leopard cats in a protected area in northern Laos. The two felids had different diets: Asian golden cats consumed mostly ungulates (35% biomass consumed), murid rodents (23%), and carnivores (15%), whereas leopard cats consumed mostly murid rodents (79%). Asian golden cats were not random in their consumption of ungulates, because muntjac (Muntiacus spp.) were selectively consumed over larger ungulates, indicating muntjac were preyed upon rather than scavenged. Dietary overlap between the two felid species was moderate (R0 = 0.60), and the dietary niche breadth of Asian golden cats (B = 8.44) was nearly twice as high as that of leopard cats (4.54). The mean (± SD) scat diameter was greater for Asian golden cats (2.1 ± 0.3 cm) than leopard cats (1.8 ± 0.2 cm), although diameters of leopard cat scats were considerably larger than previously assumed for this species. The felid species differed in their activity patterns, because Asian golden cats were diurnal, whereas leopard cats were nocturnal, although they did not differ in their use of elevation, suggesting there was no habitat segregation. Overall, leopard cats appeared to coexist with Asian golden cats, a potential predator and competitor, by exhibiting dietary and temporal partitioning. Our results showed that muntjac were important prey of Asian golden cats, suggesting the management of muntjac might be important for conserving populations of Asian golden cats.

Multi-species ELISA for the detection of antibodies against SARS-CoV-2 in animals

SummarySevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused a pandemic with millions of infected humans and hundreds of thousands of fatalities. As the novel disease - referred to as COVID-19 - unfolded, occasional anthropozoonotic infections of animals by owners or caretakers were reported in dogs, felid species and farmed mink. Further species were shown to be susceptible under experimental conditions. The extent of natural infections of animals, however, is still largely unknown. Serological methods will be useful tools for tracing SARS-CoV-2 infections in animals once test systems are validated for use in different species. Here, we developed an indirect multi-species ELISA based on the receptor-binding domain (RBD) of SARS-CoV-2. The newly established ELISA was validated using 59 sera of infected or vaccinated animals including ferrets, raccoon dogs, hamsters, rabbits, chickens, cattle and a cat, and a total of 220 antibody-negative sera of the same animal species. Overall, a diagnostic specificity of 100.0% and sensitivity of 98.31% was achieved, and the functionality with every species included in this study could be demonstrated. Hence, a versatile and reliable ELISA protocol was established that enables high-throughput antibody detection in a broad range of animal species, which may be used for outbreak investigations, to assess the seroprevalence in susceptible species or to screen for reservoir or intermediate hosts.

Presence of Endogenous Viral Elements Negatively Correlates with Feline Leukemia Virus Susceptibility in Puma and Domestic Cat Cells

ABSTRACT While feline leukemia virus (FeLV) has been shown to infect felid species other than the endemic domestic cat host, differences in FeLV susceptibility among species has not been evaluated. Previous reports have noted a negative correlation between endogenous FeLV (enFeLV) copy number and exogenous FeLV (exFeLV) infection outcomes in domestic cats. Since felids outside the genus Felis do not harbor enFeLV genomes, we hypothesized absence of enFeLV results in more severe disease consequences in felid species lacking these genomic elements. We infected primary fibroblasts isolated from domestic cats (Felis catus) and pumas (Puma concolor) with FeLV and quantitated proviral and viral antigen loads. Domestic cat enFeLV env and long terminal repeat (LTR) copy numbers were determined for each individual and compared to FeLV viral outcomes. FeLV proviral and antigen levels were also measured in 6 naturally infected domestic cats and 11 naturally infected Florida panthers (P. concolor coryi). We demonstrated that puma fibroblasts are more permissive to FeLV than domestic cat cells, and domestic cat FeLV restriction was highly related to enFeLV-LTR copy number. Terminal tissues from FeLV-infected Florida panthers and domestic cats had similar exFeLV proviral copy numbers, but Florida panther tissues have higher FeLV antigen loads. Our work indicates that enFeLV-LTR elements negatively correlate with exogenous FeLV replication. Further, Puma concolor samples lacking enFeLV are more permissive to FeLV infection than domestic cat samples, suggesting that endogenization can play a beneficial role in mitigating exogenous retroviral infections. Conversely, presence of endogenous retroelements may relate to new host susceptibility during viral spillover events. IMPORTANCE Feline leukemia virus (FeLV) can infect a variety of felid species. Only the primary domestic cat host and related small cat species harbor a related endogenous virus in their genomes. Previous studies noted a negative association between the endogenous virus copy number and exogenous virus infection in domestic cats. This report shows that puma cells, which lack endogenous FeLV, produce more virus more rapidly than domestic cat fibroblasts following cell culture challenge. We document a strong association between domestic cat cell susceptibility and FeLV long terminal repeat (LTR) copy number, similar to observations in natural FeLV infections. Viral replication does not, however, correlate with FeLV env copy number, suggesting that this effect is specific to FeLV-LTR elements. This discovery indicates a protective capacity of the endogenous virus against the exogenous form, either via direct interference or indirectly via gene regulation, and may suggest evolutionary outcomes of retroviral endogenization.