Carbon cycle in tropical upland ecosystems: a global review

Along with habitat transformation, climate change has profound impacts on biodiversity and may alter ecosystem services on which human welfare depends. Many studies of the carbon cycle have focused on lowland tropical forests; however, upland forests have been less explored despite their pivotal role in carbon sequestration. Here, I synthesized the state of knowledge on the allocation of carbon in its different stocks (aboveground, belowground, and soil) as well as in its main fluxes (plant decomposition, respiration, and litterfall) in tropical upland ecosystems of the planet. In November 2020, a systematic review was carried out to identify references published from 2000 to 2020 through a combination of key terms in Google Scholar and Scopus databases, thus analysing bibliographic, geographical, methodological, and carbon cycling information of the global upland tropics (between 23.5∘ N–23.5∘ S). After analysing a total of 1967 references according to inclusion–exclusion criteria, 135 references published in the last 20 years were selected. Most of the studies were conducted in the tropical and subtropical moist broadleaf forest of South America. The main factors studied were elevation and forest type. Forest structure and soil variables were largely associated when studying carbon cycling in these ecosystems. Estimations of carbon stocks comprised three-fourths of the total studies, while the remaining fraction focused on carbon fluxes. Aboveground biomass and carbon in soils were highly investigated, while plant decomposition and respiration were the components that received the least attention. Even though in the last 20 years there was a slight increase in the number of studies on carbon cycle in tropical upland forests, I found bias associated with the biomes and ecoregions studied (especially in the Andes). Elevation was the main factor examined but other essential aspects such as the successional gradient, landscape management, diversity–productivity relationship, faunal and microbial effect, trophic cascades, and Gadgil effect require more attention. The inclusion of different litter species and origins (i.e. roots and stems) and theoretical frameworks including home-field advantage, substrate–matrix interaction, and phenology–substrate match may provide explanatory mechanisms to better understand litter decomposition over these forests. Despite respiration being a paramount link that is closely tied to above- and belowground compartment, this flux constitutes one of the important gaps to fulfil in future research. For a comprehensive understanding of the carbon cycle in upland forests, it is necessary to obtain information on its main fluxes and integrate them into climate change mitigation plans.

Co-varying effects of vegetation structure and terrain attributes are responsible for soil respiration spatial patterns in a sandy forest–steppe transition zone

Forest–steppe habitats in central Hungary have contrasting canopy structure with strong influence on the spatiotemporal variability of ecosystem functions. Canopy differences also co-vary with terrain feature effects, hampering the detection of key drivers of carbon cycling in this threatened habitat. We carried out seasonal measurements of ecosystem functions (soil respiration and leaf area index), microclimate and soil variables as well as terrain features along transects for 3 years in poplar groves and the surrounding grasslands. We found that the terrain features and the canopy differences co-varyingly affected the abiotic and biotic factors of this habitat. Topography had an effect on the spatial distribution of soil organic carbon content. Canopy structure had a strong modifying effect through allocation patterns and microclimatic conditions, both affecting soil respiration rates. Due to the vegetation structure difference between the groves and grasslands, spatial functional diversity was observed. We found notably different conditions under the groves with high soil respiration, soil water content and leaf area index; in contrast, on the grasslands (especially in E–SE–S directions from the trees) soil temperature and vapor pressure deficit showed high values. Processes of aridification due to climate change threaten these habitats and may cause reduction in the amount and extent of forest patches and decrease in landscape diversity. Owing to habitat loss, reduction in carbon stock may occur, which in turn has a significant impact on the local and global carbon cycles.

Models of poisoning effects on vulture populations show that small but frequent episodes have a larger effect than large but rare ones

Vultures are among the most threatened avian taxa in the world. When vultures aggregate in large numbers to feed, poisoned carcasses can extirpate entire populations at once. In the light of shrinking numbers worldwide, restocking and reintroduction projects, where wild or captive-bred vultures are released back into nature, constitute a crucial management tool, successfully implemented in many countries. However, reestablishment of sustainable vulture populations to their historical ranges remains a serious challenge, especially if the threat of poisoning persists, which is usually the case. In this study, we model the outcome of a restocking project where an initial colony is subject to repeated poisoning events. We use as an example the isolated population of the griffon vulture (Gyps fulvus) in Cyprus. Mathematical considerations and model simulations show that the probability of colony persistence depends on the initial population size and the intensity and frequency of the poisoning incidents. This type of scenario creates an Allee effect that requires a colony to exceed a minimum size in order to survive. Also in this scenario, a sequence of small but frequent poisoning episodes is worse on average than a few large and rare ones of the same cumulative mortality. Future population reinforcement efforts for vultures should focus on the release of adult birds in adequate numbers for the successful establishment of sustainable colonies and should involve a reduction in small but persistent sources of mortality such as the poison baiting of small canids that until now has been neglected by conservation scientists.

Drought-tolerant cyanobacteria and mosses as biotechnological tools to attain land degradation neutrality

The induction of biocrusts through inoculation-based techniques has gained increasing scientific attention in the last 2 decades due to its potential to address issues related to soil degradation and desertification. The technology has shown the most rapid advances in the use of biocrust organisms, particularly cyanobacteria and mosses, as inoculants and biocrust initiators. Cyanobacteria and mosses are poikilohydric organisms – i.e., desiccation-tolerant organisms capable of reactivating their metabolism upon rehydration – that can settle on bare soils in abiotically stressing habitats, provided that selected species are used and an appropriate and customized protocol is applied. The success of inoculation of cyanobacteria and mosses depends on the inoculant's physiology, but also on the ability of the practitioner to identify and control, with appropriate technical approaches in each case study, those environmental factors that most influence the inoculant settlement and its ability to develop biocrusts. This review illustrates the current knowledge and results of biocrust induction biotechnologies that use cyanobacteria or mosses as inoculants. At the same time, this review's purpose is to highlight the current technological gaps that hinder an efficient application of the technology in the field.

Changes in the Cerrado vegetation structure: insights from more than three decades of ecological succession

Changes in the vegetation of Brazilian Cerrado may occur over time. However, long-term dynamics are not fully understood yet, especially woody plant encroachment (WPE). The objective of this study was to examine changes in vegetation structure in a preserved area in Triângulo Mineiro region, within the southern Brazilian Cerrado domain, over 32 years (1987, 2005, and 2019). We based the study on field and literature surveys, as well as satellite imagery, and hypothesized that, due to the absence of periodic fires or grazing, Cerrado open formations (i.e., grassland or savanna) tend to become denser due to WPE. Shrubby grassland cover assessed in 1987 disappeared in the following periods (from 30.0 % to 0.0 % in 2019) while forest formations increased (from 7.0 % in 1987 to 11.0 % in 2019). Changes between 2005 and 2019 occurred within the stricto sensu cerrado subdivisions, with reduction of sparse cerrado (from 34.2 % to 7.7 %) and an increase in dense cerrado (from 6.9 % to 39.8 %). Normalized difference vegetation index (NDVI) applied for similar periods indicates a progressive increase of values over time (from 1986 (0.61±0.10) to 2004 (0.65±0.06) and 2018 (0.78±0.05)) and corroborates the WPE process. These patterns imply the loss of biodiversity in open plant formation. Another major consequence was the reduction of wetlands and possible impact on water supply. Such patterns are important to support plant management plans for the threatened Cerrado open plant formations.

Close-to-nature management positively improves the spatial structure of Masson pine forest stands

Close-to-nature management (CTNM) has been proposed as a promising forestry management approach to improve the structure and quality of forests, which integrates wood production and ecological service functions. Research on the effect of CTNM on the univariate and bivariate distribution of the spatial structure of forest stands provides a scientific basis for the evaluation of CTNM implemented in forestry. Here, we analyzed and compared the spatial-structure characteristics of Masson pine (Pinus massoniana) plantations (young, middle-age, and near-mature stages) under CTNM 8 years after selective cutting and unmanaged control. We used univariate and bivariate distribution of three spatial-structure parameters: mingling (M), dominance (U), and uniform-angle index (W). Results showed that the effect of CTNM on spatial structure was more remarkable in middle-aged and near-mature Masson pine forests compared with the young forest. CTNM significantly improved mingling degree and promoted the horizontal distribution, thereby changing from a cluster to a random distribution. Moreover, CTNM improved the proportion of trees with a high mixing degree and random distribution and the proportion of trees having a micro-structure of random distribution with a high degree of mixture and dominance with a high degree of mixture in middle-aged and near-mature Masson pine forest. Overall, the implementation of CTNM 8 years ago showed a positive effect on the improvement of the spatial structure of Masson pine forest, but the present spatial structure is suboptimal. Further implementation of CTNM to adjust the mingling and uniform-angle index is necessary, and CTNM according to this method of frequency distribution of stand structure parameters can improve the success of forest management.

Ecological correlates of crop yield growth and interannual yield variation at a global scale

Artificial selection and genetic engineering plus an expanding repertoire and use of agrochemical inputs have allowed a rapid and continuous increase in crop yield (i.e., volume production per unit area) over the last century, which is needed to fulfill food demands from a growing human population. However, the first signs of yield deceleration and stagnation have already been reported for some globally important crops. Therefore, the study of the drivers of yield growth and its variation is essential for directing research and policies aiming at ensuring food security in the forthcoming years. We used data on mean and variability in annual yield growth for 107 globally important crops to assess the role of environmental (i.e., climatic region) and plant intrinsic traits (i.e., type of harvested organ, pollinator dependence, and life form) as drivers of change in yield growth and its stability. We applied a comparative approach to control for biases associated with phylogenetic non-independence among crops, an approach rarely used in agronomic studies. Average yield growth and its variation were not phylogenetically structured. Yield growth decreased with increasing pollinator dependence in tree crops but not in herbaceous and shrubby crops. Interannual yield variation tended to increase with increasing pollinator dependence, and it was higher in crops from temperate regions, in those cultivated for their reproductive organs, and in tree and shrubby crops as compared with herbaceous ones. Information on ecological correlates of crop yield growth and interannual yield variation can be used in the design of more sustainable and diversified agriculture schemes.

Frog vocalization is influenced by moon phases: Brazilian frogs tend to prefer low-albedo phases

Lunar phases remarkably influence the circadian cycle of living beings. Early amphibian studies date back to the 1960s, but only recently has more research been conducted in this field. Much still needs to be understood to establish the behavioral pattern of this group according to the synodic cycle. In the present study, we sought to determine (i) whether the vocalization activity was influenced by the lunar phases and (ii) whether the influence was species-specific or affects the community with equal intensity. We expected a great diversity of behaviors and adaptations. Rayleigh's test was used to verify whether the sample differs significantly from the null hypothesis; Rao's test was used to check sample size sufficiency; and the Kiviat diagram was used to evaluate the activity of the species in relation to the complete synodic cycle. We have observed 1691 individuals of 37 species over 882 d. The lunar cycle influenced 78 % of the species, with 32 % preferring the lower-albedo phases. The activity pattern of each species was established. These results suggest that the lunar phases influence the vocalization activity of most species. Therefore, there is a general pattern of activity related to the synodic cycles; however, the specificities still need to be better understood.

Life in the suburbs: artificial heat source selection for nocturnal thermoregulation in a diurnally active tropical lizard

The rapid expansion of urban environments invariably presents a novel series of pressures on wildlife due to changes in external environmental factors. In reptiles, any such changes in temperature are critical since thermoregulation is the key driver in the function of many physiological processes. How reptiles adapt to such changes may vary from those species that are impacted negatively to others that have the behavioural flexibility to exploit new conditions. In this paper we describe retreat site selection, movements and aspects of the thermal ecology of the African lizard Agama agama in urban environments of West Africa. In early evening lizards began movement from late-afternoon core activity areas and ascended the walls of houses for overnight retreats. A high proportion retreated to locations in groups under or on top of warm electrical panels. The thermal potential these panels offered was the attainment of body temperatures equal to or higher than the minimum preferred body temperature (PBT ≈ 36 ∘C in A. agama) and hence increased physiological performance. The lizards that took advantage of the heat sources travelled further each day to and from diurnal activity areas than individuals that spent the night high on walls but not next to heat panels. There were both potential costs (enhanced predation pressures) and benefits (impacts on thermal ecology, retreat site selection) of this behaviour for lizards living in urban environments.

Cohort effect on discriminant rate: the case of greater flamingo (<i>Phœnicopterus roseus</i>) chicks sexed with morphological characters

We used a large dataset of greater flamingo chicks banded and measured at Camargue, France, to verify the applicability of discriminant function analysis to sex this species. Males and females sexed genetically differed significantly in all of the morphological characters measured (body mass, tarsus and wing length), with males being significantly larger than females. Although the discriminant rate varied substantially from one year to another, we found that it increased with the sample size of genetically sexed individuals. Our results suggest that discriminant function analysis (DFA) does not provide an efficient tool to sex greater flamingo chicks as these relationship are highly variable across years, requiring the genetic determination of sex on a large number of individuals every year for calibrating the DFA and still providing an overall low accuracy in sex determination. Indeed, conditions at breeding seasons can vary between years and can be considered proximate causes affecting the correct discriminant rate. Like previous studies, we recommend caution in dealing with discriminant equations computed from small datasets, and our simulation suggests that 325 genetically sexed individuals are needed to obtain 80 % correctly classified greater flamingo chicks.